On Fri, May 15, 2020, at 8:52 PM, hritikesh semwal via discuss wrote:
Hello,

I am working on a parallel CFD solver with MPI and I am using an account on a cluster to run my executable. The hardware structure of my account is as follows;

Architecture:          x86_64
CPU op-mode(s):        32-bit, 64-bit
Byte Order:            Little Endian
CPU(s):                32
On-line CPU(s) list:   0-31
Thread(s) per core:    2
Core(s) per socket:    8
CPU socket(s):         2
NUMA node(s):          2
Vendor ID:             GenuineIntel
CPU family:            6
Model:                 62
Stepping:              4
CPU MHz:               2600.079
BogoMIPS:              5199.25
Virtualization:        VT-x
L1d cache:             32K
L1i cache:             32K
L2 cache:              256K
L3 cache:              20480K
NUMA node0 CPU(s):     0,2,4,6,8,10,12,14,16,18,20,22,24,26,28,30
NUMA node1 CPU(s):     1,3,5,7,9,11,13,15,17,19,21,23,25,27,29,31

Initially, I was running my executable with any binding options and in that case, whenever I was switching from 2 to 4 processors my computation time was also increasing along with communication time inside some iterative loop. 

Today, somewhere I read about binding options in MPI through which I can manage the allocation of processors. Initially, I used the "-bind-to core" option and the results were different and I got time reduction up to 16 processors and after that with 24 and 32 processors, it has started increasing. Results of timing are as follows;
2 procs- 160 seconds, 4 procs- 84 seconds, 8 procs- 45 seconds, 16 procs- 28 seconds, 24 procs- 38 seconds, 32 procs- 34 seconds.

After that, I used some other combinations of binding option but did not get better timing results compared to -bind-to core option. So, I back edited the bind to option to core but now I am getting different timing results with the same executable which are as follows,
2 procs- 164 seconds, 4 procs- 85 seconds, 8 procs- 45 seconds, 16 procs- 48 seconds, 24 procs- 52 seconds, 32 seconds- 98 seconds.

Hitesh,

You might find the following online workshop useful:
http://www.hlrs.de/training/2020-05-25-VI-HPS/

Regards,
Benson