Configuring MPICH version 3.2b1 with  '--prefix=/cygdrive/c/walt/Software/MPICH/installation'
Running on system: CYGWIN_NT-6.3 HP_Envy 1.7.35(0.287/5/3) 2015-03-04 12:09 x86_64 Cygwin
checking for icc... no
checking for pgcc... no
checking for xlc... no
checking for xlC... no
checking for pathcc... no
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.exe
checking for suffix of executables... .exe
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking how to run the C preprocessor... gcc -E
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /usr/bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking for style of include used by make... GNU
checking whether make supports nested variables... yes
checking dependency style of gcc... gcc3
checking whether to enable maintainer-specific portions of Makefiles... yes
checking for ar... ar
checking the archiver (ar) interface... ar
checking build system type... x86_64-unknown-cygwin
checking host system type... x86_64-unknown-cygwin
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc... C:/Fortran_Tools/gfortran/x86_64-w64-mingw32/bin/ld.exe
checking if the linker (C:/Fortran_Tools/gfortran/x86_64-w64-mingw32/bin/ld.exe) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /cygdrive/c/Fortran_Tools/gfortran/bin/nm -B
checking the name lister (/cygdrive/c/Fortran_Tools/gfortran/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 8192
checking how to convert x86_64-unknown-cygwin file names to x86_64-unknown-cygwin format... func_convert_file_noop
checking how to convert x86_64-unknown-cygwin file names to toolchain format... func_convert_file_noop
checking for C:/Fortran_Tools/gfortran/x86_64-w64-mingw32/bin/ld.exe option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... file_magic ^x86 archive import|^x86 DLL
checking for dlltool... dlltool
checking how to associate runtime and link libraries... func_cygming_dll_for_implib
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /cygdrive/c/Fortran_Tools/gfortran/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /usr/bin/dd
checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1
checking for mt... mt
checking if mt is a manifest tool... no
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... no
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -DDLL_EXPORT -DPIC
checking if gcc PIC flag -DDLL_EXPORT -DPIC works... yes
checking if gcc static flag -static works... yes
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (C:/Fortran_Tools/gfortran/x86_64-w64-mingw32/bin/ld.exe) supports shared libraries... yes
checking whether -lc should be explicitly linked in... yes
checking dynamic linker characteristics... Win32 ld.exe
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking whether make supports nested variables... (cached) yes
checking for icpc... no
checking for pgCC... no
checking for xlC... no
checking for pathCC... no
checking for g++... g++
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking dependency style of g++... gcc3
checking how to run the C++ preprocessor... g++ -E
checking for ld used by g++... C:/Fortran_Tools/gfortran/x86_64-w64-mingw32/bin/ld.exe
checking if the linker (C:/Fortran_Tools/gfortran/x86_64-w64-mingw32/bin/ld.exe) is GNU ld... yes
checking whether the g++ linker (C:/Fortran_Tools/gfortran/x86_64-w64-mingw32/bin/ld.exe) supports shared libraries... yes
checking for g++ option to produce PIC... -DDLL_EXPORT -DPIC
checking if g++ PIC flag -DDLL_EXPORT -DPIC works... yes
checking if g++ static flag -static works... yes
checking if g++ supports -c -o file.o... yes
checking if g++ supports -c -o file.o... (cached) yes
checking whether the g++ linker (C:/Fortran_Tools/gfortran/x86_64-w64-mingw32/bin/ld.exe) supports shared libraries... yes
checking dynamic linker characteristics... Win32 ld.exe
checking how to hardcode library paths into programs... immediate
checking for ifort... no
checking for pgf90... no
checking for pathf90... no
checking for pathf95... no
checking for xlf90... no
checking for xlf95... no
checking for xlf2003... no
checking for gfortran... gfortran
checking whether we are using the GNU Fortran compiler... yes
checking whether gfortran accepts -g... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for gfortran option to produce PIC... -DDLL_EXPORT
checking if gfortran PIC flag -DDLL_EXPORT works... yes
checking if gfortran static flag -static works... yes
checking if gfortran supports -c -o file.o... yes
checking if gfortran supports -c -o file.o... (cached) yes
checking whether the gfortran linker (C:/Fortran_Tools/gfortran/x86_64-w64-mingw32/bin/ld.exe) supports shared libraries... yes
checking dynamic linker characteristics... Win32 ld.exe
checking how to hardcode library paths into programs... immediate
checking whether we are using the GNU Fortran 77 compiler... yes
checking whether gfortran accepts -g... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for gfortran option to produce PIC... -DDLL_EXPORT
checking if gfortran PIC flag -DDLL_EXPORT works... yes
checking if gfortran static flag -static works... yes
checking if gfortran supports -c -o file.o... yes
checking if gfortran supports -c -o file.o... (cached) yes
checking whether the gfortran linker (C:/Fortran_Tools/gfortran/x86_64-w64-mingw32/bin/ld.exe) supports shared libraries... yes
checking dynamic linker characteristics... Win32 ld.exe
checking how to hardcode library paths into programs... immediate
checking hcoll/api/hcoll_api.h usability... no
checking hcoll/api/hcoll_api.h presence... no
checking for hcoll/api/hcoll_api.h... no
checking for hcoll_init in -lhcoll... no
configure: RUNNING PREREQ FOR ch3:nemesis
checking for getpagesize... yes
checking for getpagesize... (cached) yes
configure: ===== configuring src/mpl =====
configure: running /bin/sh ./configure --disable-option-checking '--prefix=/cygdrive/c/walt/Software/MPICH/installation' --disable-versioning --cache-file=/dev/null --srcdir=.
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /usr/bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking for style of include used by make... GNU
checking whether the C compiler works... yes
checking for C compiler default output file name... a.exe
checking for suffix of executables... .exe
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking dependency style of gcc... gcc3
checking the archiver (ar) interface... ar
checking build system type... x86_64-unknown-cygwin
checking host system type... x86_64-unknown-cygwin
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc... C:/Fortran_Tools/gfortran/x86_64-w64-mingw32/bin/ld.exe
checking if the linker (C:/Fortran_Tools/gfortran/x86_64-w64-mingw32/bin/ld.exe) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /cygdrive/c/Fortran_Tools/gfortran/bin/nm -B
checking the name lister (/cygdrive/c/Fortran_Tools/gfortran/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 8192
checking how to convert x86_64-unknown-cygwin file names to x86_64-unknown-cygwin format... func_convert_file_noop
checking how to convert x86_64-unknown-cygwin file names to toolchain format... func_convert_file_noop
checking for C:/Fortran_Tools/gfortran/x86_64-w64-mingw32/bin/ld.exe option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... file_magic ^x86 archive import|^x86 DLL
checking for dlltool... dlltool
checking how to associate runtime and link libraries... func_cygming_dll_for_implib
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /cygdrive/c/Fortran_Tools/gfortran/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /usr/bin/dd
checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1
checking for mt... mt
checking if mt is a manifest tool... no
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... no
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -DDLL_EXPORT -DPIC
checking if gcc PIC flag -DDLL_EXPORT -DPIC works... yes
checking if gcc static flag -static works... yes
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (C:/Fortran_Tools/gfortran/x86_64-w64-mingw32/bin/ld.exe) supports shared libraries... yes
checking whether -lc should be explicitly linked in... yes
checking dynamic linker characteristics... Win32 ld.exe
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking whether make supports nested variables... (cached) yes
checking for an ANSI C-conforming const... yes
checking for C/C++ restrict keyword... __restrict
checking for inline... inline
checking for variable argument list macro functionality... yes
checking for gcov... gcov
checking whether the compiler supports __typeof(variable)... yes
checking stdio.h usability... yes
checking stdio.h presence... yes
checking for stdio.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking stdarg.h usability... yes
checking stdarg.h presence... yes
checking for stdarg.h... yes
checking ctype.h usability... yes
checking ctype.h presence... yes
checking for ctype.h... yes
checking search.h usability... yes
checking search.h presence... yes
checking for search.h... yes
checking for sys/types.h... (cached) yes
checking sys/uio.h usability... no
checking sys/uio.h presence... no
checking for sys/uio.h... no
checking for inttypes.h... (cached) yes
checking for stdint.h... (cached) yes
checking valgrind.h usability... no
checking valgrind.h presence... no
checking for valgrind.h... no
checking memcheck.h usability... no
checking memcheck.h presence... no
checking for memcheck.h... no
checking valgrind/valgrind.h usability... no
checking valgrind/valgrind.h presence... no
checking for valgrind/valgrind.h... no
checking valgrind/memcheck.h usability... no
checking valgrind/memcheck.h presence... no
checking for valgrind/memcheck.h... no
checking helgrind.h usability... no
checking helgrind.h presence... no
checking for helgrind.h... no
checking valgrind/helgrind.h usability... no
checking valgrind/helgrind.h presence... no
checking for valgrind/helgrind.h... no
checking drd.h usability... no
checking drd.h presence... no
checking for drd.h... no
checking valgrind/drd.h usability... no
checking valgrind/drd.h presence... no
checking for valgrind/drd.h... no
checking whether the valgrind headers are broken or too old... yes
checking for strdup... yes
checking whether strdup needs a declaration... no
checking for snprintf... yes
checking whether snprintf needs a declaration... no
checking for strncmp... yes
checking whether strncmp needs a declaration... no
checking for putenv... yes
checking whether putenv needs a declaration... no
checking whether __attribute__ allowed... yes
checking whether __attribute__((format)) allowed... yes
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating localdefs
config.status: creating include/config.h
config.status: executing depfiles commands
config.status: executing libtool commands
config.status: executing include/mplconfig.h commands
config.status: creating include/mplconfig.h - prefix MPL for include/config.h defines
configure: ===== done with src/mpl configure =====
configure: sourcing src/mpl/localdefs
configure: ===== configuring src/openpa =====
configure: running /bin/sh ./configure --disable-option-checking '--prefix=/cygdrive/c/walt/Software/MPICH/installation' --disable-versioning --with-atomic-primitives=auto_allow_emulation --cache-file=/dev/null --srcdir=.
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /usr/bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking for style of include used by make... GNU
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.exe
checking for suffix of executables... .exe
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking dependency style of gcc... gcc3
checking the archiver (ar) interface... ar
checking build system type... x86_64-unknown-cygwin
checking host system type... x86_64-unknown-cygwin
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc... C:/Fortran_Tools/gfortran/x86_64-w64-mingw32/bin/ld.exe
checking if the linker (C:/Fortran_Tools/gfortran/x86_64-w64-mingw32/bin/ld.exe) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /cygdrive/c/Fortran_Tools/gfortran/bin/nm -B
checking the name lister (/cygdrive/c/Fortran_Tools/gfortran/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 8192
checking how to convert x86_64-unknown-cygwin file names to x86_64-unknown-cygwin format... func_convert_file_noop
checking how to convert x86_64-unknown-cygwin file names to toolchain format... func_convert_file_noop
checking for C:/Fortran_Tools/gfortran/x86_64-w64-mingw32/bin/ld.exe option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... file_magic ^x86 archive import|^x86 DLL
checking for dlltool... dlltool
checking how to associate runtime and link libraries... func_cygming_dll_for_implib
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /cygdrive/c/Fortran_Tools/gfortran/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /usr/bin/dd
checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1
checking for mt... mt
checking if mt is a manifest tool... no
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... no
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -DDLL_EXPORT -DPIC
checking if gcc PIC flag -DDLL_EXPORT -DPIC works... yes
checking if gcc static flag -static works... yes
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (C:/Fortran_Tools/gfortran/x86_64-w64-mingw32/bin/ld.exe) supports shared libraries... yes
checking whether -lc should be explicitly linked in... yes
checking dynamic linker characteristics... Win32 ld.exe
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking whether make supports nested variables... (cached) yes
checking for gcc... (cached) gcc
checking whether we are using the GNU C compiler... (cached) yes
checking whether gcc accepts -g... (cached) yes
checking for gcc option to accept ISO C89... (cached) none needed
checking whether gcc understands -c and -o together... (cached) yes
checking dependency style of gcc... (cached) gcc3
checking whether to enable assertions... yes
checking pthread.h usability... yes
checking pthread.h presence... yes
checking for pthread.h... yes
checking atomic.h usability... no
checking atomic.h presence... no
checking for atomic.h... no
checking intrin.h usability... yes
checking intrin.h presence... yes
checking for intrin.h... yes
checking for inttypes.h... (cached) yes
checking for stdint.h... (cached) yes
checking stddef.h usability... yes
checking stddef.h presence... yes
checking for stddef.h... yes
checking for C/C++ restrict keyword... __restrict
checking for inline... inline
checking for an ANSI C-conforming const... yes
checking for pthread_create in -lpthread... yes
checking for pthread_yield... no
checking sched.h usability... yes
checking sched.h presence... yes
checking for sched.h... yes
checking for sched_yield... yes
checking if 100 threads can be run at once... yes
checking size of void *... 8
checking size of int... 4
checking whether __attribute__ allowed... yes
checking whether __attribute__((format)) allowed... yes
checking if compiler rejects bogus asm statements... yes
checking for support for gcc x86/x86_64 primitives... yes
checking for support for gcc x86 primitives for pre-Pentium 4... yes
checking for support for gcc ia64 primitives... no
checking for support for gcc PowerPC atomics... no
checking for support for gcc ARM atomics... no
checking for support for gcc SiCortex atomics... no
checking for support for gcc atomic intrinsics... yes
checking for support for Windows NT atomic intrinsics... no
checking for support for Sun atomic operations library... no
checking whether to enable strict fairness checks... no
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating src/Makefile
config.status: creating test/Makefile
config.status: creating openpa.pc
config.status: creating src/config.h
config.status: executing depfiles commands
config.status: executing libtool commands
config.status: executing src/opa_config.h commands
config.status: creating src/opa_config.h - prefix OPA for src/config.h defines
configure: ===== done with src/openpa configure =====
sourcing /cygdrive/c/walt/Software/MPICH/mpich-master-v3.2b1-96-gabb56764/src/pm/hydra/mpichprereq
checking whether the compiler defines __func__... yes
checking whether the compiler defines __FUNC__... no
checking whether the compiler sets __FUNCTION__... yes
checking whether C compiler accepts option -O2... yes
checking whether C compiler option -O2 works with an invalid prototype program... yes
checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes
checking for type of weak symbol alias support... pragma weak accepted but does not work (probably creates two non-weak entries)
no
checking whether __attribute__ ((weak)) allowed... yes
checking whether __attribute__ ((weak_import)) allowed... yes
checking whether __attribute__((weak,alias(...))) allowed... yes
checking for shared library (esp. rpath) characteristics of CC... done (results in src/env/cc_shlib.conf)
checking whether Fortran 77 compiler accepts option -O2... yes
checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes
checking how to get verbose linking output from gfortran... -v
checking for Fortran 77 libraries of gfortran...  -LC:/Fortran_Tools/gfortran/bin/../lib/gcc/x86_64-w64-mingw32/4.9.2 -LC:/Fortran_Tools/gfortran/bin/../lib/gcc -LC:/Fortran_Tools/gfortran/bin/../lib/gcc/x86_64-w64-mingw32/4.9.2/../../../../x86_64-w64-mingw32/lib/../lib -LC:/Fortran_Tools/gfortran/bin/../lib/gcc/x86_64-w64-mingw32/4.9.2/../../../../lib -LC:/Fortran_Tools/gfortran/bin/../lib/gcc/x86_64-w64-mingw32/4.9.2/../../../../x86_64-w64-mingw32/lib -LC:/Fortran_Tools/gfortran/bin/../lib/gcc/x86_64-w64-mingw32/4.9.2/../../.. -lgfortran -lmingw32 -lmoldname -lmingwex -lmsvcrt -lquadmath -lm -lpthread -ladvapi32 -lshell32 -luser32 -liconv
checking whether gfortran accepts the FLIBS found by autoconf... yes
checking whether gcc links with FLIBS found by autoconf... yes
checking whether Fortran 77 and C objects are compatible... yes
checking for linker for Fortran main program... Use Fortran to link programs
checking for Fortran 77 name mangling... lower uscore
checking for libraries to link Fortran main with C stdio routines... none
checking whether Fortran init will work with C... yes
checking for extension for Fortran 90 programs... f90
checking whether the Fortran 90 compiler (gfortran    ) works... yes
checking whether the Fortran 90 compiler (gfortran    ) is a cross-compiler... no
checking whether Fortran 90 compiler works with Fortran 77 compiler... yes
checking for shared library (esp. rpath) characteristics of F77... done (results in src/env/f77_shlib.conf)
checking whether Fortran 77 accepts ! for comments... yes
checking for include directory flag for Fortran... -I
checking for Fortran 77 flag for library directories... -L
checking whether Fortran 77 compiler processes .F files with C preprocessor... yes
checking whether gfortran allows mismatched arguments... yes
checking for Fortran 2008 support... no
checking for shared library (esp. rpath) characteristics of FC... done (results in src/env/fc_shlib.conf)
checking whether the Fortran 90 compiler (gfortran    ) works... yes
checking whether the Fortran 90 compiler (gfortran    ) is a cross-compiler... no
checking for Fortran 90 module extension... mod
checking for Fortran 90 module include flag... -I
checking for Fortran 90 module output directory flag... -J
checking whether Fortran 90 compiler accepts option -O2... yes
checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes
checking whether Fortran 90 compiler processes .F90 files with C preprocessor... yes
checking what libraries are needed to link Fortran90 programs with C routines that use stdio... none
checking whether the C++ compiler g++ can build an executable... yes
checking whether C++ compiler works with string... yes
checking whether the compiler supports exceptions... yes
checking whether the compiler recognizes bool as a built-in type... yes
checking whether the compiler implements namespaces... yes
checking whether <iostream> available... yes
checking whether the compiler implements the namespace std... yes
checking whether <math> available... no
checking for GNU g++ version... 4 . 9
checking for shared library (esp. rpath) characteristics of CXX... done (results in src/env/cxx_shlib.conf)
checking whether C++ compiler accepts option -O2... yes
checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes
checking for perl... /usr/bin/perl
checking for ar... ar
checking for ranlib... ranlib
checking for killall... killall
checking whether install works... yes
checking whether mkdir -p works... yes
checking for make... make
checking whether clock skew breaks make... no
checking whether make supports include... yes
checking whether make allows comments in actions... yes
checking for virtual path format... VPATH
checking whether make sets CFLAGS... yes
checking for bash... /usr/bin/bash
checking whether /usr/bin/bash supports arrays... yes
checking for doctext... false
checking for an ANSI C-conforming const... yes
checking for working volatile... yes
checking for C/C++ restrict keyword... __restrict
checking for inline... inline
checking whether __attribute__ allowed... yes
checking whether __attribute__((format)) allowed... yes
checking if C compiler supports __builtin_expect... yes
checking whether byte ordering is bigendian... no
checking whether C compiler allows unaligned doubles... yes
checking whether gcc supports __func__... yes
checking whether long double is supported... yes
checking whether long long is supported... yes
checking for max C struct integer alignment... eight
checking for max C struct floating point alignment... sixteen
checking for max C struct alignment of structs with doubles... eight
checking for max C struct floating point alignment with long doubles... sixteen
configure: WARNING: Structures containing long doubles may be aligned differently from structures with floats or longs.  MPICH does not handle this case automatically and you should avoid assumed extents for structures containing float types.
checking if alignment of structs with doubles is based on position... no
checking if alignment of structs with long long ints is based on position... no
checking if double alignment breaks rules, find actual alignment... no
checking for alignment restrictions on pointers... int or better
checking size of char... 1
checking size of unsigned char... 1
checking size of short... 2
checking size of unsigned short... 2
checking size of int... 4
checking size of unsigned int... 4
checking size of long... 4
checking size of unsigned long... 4
checking size of long long... 8
checking size of unsigned long long... 8
checking size of float... 4
checking size of double... 8
checking size of long double... 16
checking size of void *... 8
checking for ANSI C header files... (cached) yes
checking stddef.h usability... yes
checking stddef.h presence... yes
checking for stddef.h... yes
checking size of wchar_t... 2
checking size of float_int... 8
checking size of double_int... 16
checking size of long_int... 8
checking size of short_int... 8
checking size of two_int... 8
checking size of long_double_int... 32
checking sys/bitypes.h usability... no
checking sys/bitypes.h presence... no
checking for sys/bitypes.h... no
checking for inttypes.h... (cached) yes
checking for stdint.h... (cached) yes
checking for int8_t... yes
checking for int16_t... yes
checking for int32_t... yes
checking for int64_t... yes
checking for uint8_t... yes
checking for uint16_t... yes
checking for uint32_t... yes
checking for uint64_t... yes
checking stdbool.h usability... yes
checking stdbool.h presence... yes
checking for stdbool.h... yes
checking complex.h usability... yes
checking complex.h presence... yes
checking for complex.h... yes
checking size of _Bool... 1
checking size of float _Complex... 8
checking size of double _Complex... 16
checking size of long double _Complex... 32
checking for _Bool... yes
checking for float _Complex... yes
checking for double _Complex... yes
checking for long double _Complex... yes
checking for size of Fortran type integer... 4
checking for size of Fortran type real... 4
checking for size of Fortran type double precision... 8
checking whether integer*1 is supported... yes
checking whether integer*2 is supported... yes
checking whether integer*4 is supported... yes
checking whether integer*8 is supported... yes
checking whether integer*16 is supported... yes
checking whether real*4 is supported... yes
checking whether real*8 is supported... yes
checking whether real*16 is supported... yes
./configure: line 40024: test: 4
: integer expression expected
./configure: line 40029: test: 4
: integer expression expected
./configure: line 40043: test: 4
: integer expression expected
./configure: line 40072: test: 8
: integer expression expected
./configure: line 40077: test: 8
: integer expression expected
./configure: line 40091: test: 8
: integer expression expected
checking for C type matching Fortran real... unavailable
checking for C type matching Fortran double... unavailable
expr: syntax error
expr: syntax error
expr: non-integer argument
./configure: line 40178: test: : integer expression expected
./configure: line 40183: test: -gt: unary operator expected
./configure: line 40197: test: -lt: unary operator expected
./configure: line 40178: test: : integer expression expected
./configure: line 40183: test: -gt: unary operator expected
./configure: line 40197: test: -lt: unary operator expected
./configure: line 40178: test: : integer expression expected
./configure: line 40183: test: -gt: unary operator expected
./configure: line 40197: test: -lt: unary operator expected
expr: non-integer argument
./configure: line 40246: test: -ge: unary operator expected
expr: syntax error
expr: syntax error
expr: syntax error
expr: syntax error
configure: error: Internal Error: Failed to convert MPI_INTEGER value to hex!  Original value was 0x4c001b
