Re: [mpich-discuss] Installation on Blue Gene/Q
Hi Rob, Is this already installed/avaialble on MIRA? I would like to try this to check some mpi i/o hints. Regards, Pramod Paul Coffmann put together a little build-it-all environment:
https://github.com/pkcoff/OFI-BGQ-BuildEnv
You might be the first on-Argonne Blue Gene to try this out: I'm sure Paul would like to hear your experience.
==rob
Cheers, Marc-Andre
On 23.03.2017 02:36, Balaji, Pavan wrote:
Marc-Andre,
We dropped support for the BG/Q pamid device in mpich- 3.2. However, in the mpich-3.3 series, we have brought back support for BG/Q through the CH4:OFI stack. It's experimental, but the performance so far is significantly better than the old pamid device. Can you try that instead?
-- Pavan
On Mar 22, 2017, at 2:45 PM, Marc-André Hermanns <m.a.hermanns@fz -juelich.de> wrote:
Dear MPICH team,
we are trying to install the latest MPICH 3.2 on our Blue Gene/Q system, but fail with both XL and clang.
A colleague forwarded the make error log from his try using XL:
make[2]: Entering directory `/homeb/zam/scprod/mstephan/mpich3/mpich-3.2' CC src/mpi/attr/lib_libmpi_la-attr_delete.lo "/homeb/zam/scprod/mstephan/mpich3/mpich- 3.2/src/mpid/pamid/include/mpidi_thread.h", line 64.9: 1506-236 (W) Macro name MPIU_THREAD_CS_ENTER has been redefined. "/homeb/zam/scprod/mstephan/mpich3/mpich- 3.2/src/mpid/pamid/include/mpidi_thread.h", line 64.9: 1506-358 (I) "MPIU_THREAD_CS_ENTER" is defined on line 80 of ./src/util/thread/mpiu_thread_multiple.h. "/homeb/zam/scprod/mstephan/mpich3/mpich- 3.2/src/mpid/pamid/include/mpidi_thread.h", line 65.9: 1506-236 (W) Macro name MPIU_THREAD_CS_EXIT has been redefined. "/homeb/zam/scprod/mstephan/mpich3/mpich- 3.2/src/mpid/pamid/include/mpidi_thread.h", line 65.9: 1506-358 (I) "MPIU_THREAD_CS_EXIT" is defined on line 81 of ./src/util/thread/mpiu_thread_multiple.h. "/homeb/zam/scprod/mstephan/mpich3/mpich- 3.2/src/mpid/pamid/include/mpidi_thread.h", line 66.9: 1506-236 (W) Macro name MPIU_THREAD_CS_YIELD has been redefined. "/homeb/zam/scprod/mstephan/mpich3/mpich- 3.2/src/mpid/pamid/include/mpidi_thread.h", line 66.9: 1506-358 (I) "MPIU_THREAD_CS_YIELD" is defined on line 82 of ./src/util/thread/mpiu_thread_multiple.h. "./src/include/mpiimpl.h", line 1184.5: 1506-046 (S) Syntax error. "./src/include/mpiimpl.h", line 1481.5: 1506-046 (S) Syntax error. "./src/include/mpiimpl.h", line 1636.5: 1506-046 (S) Syntax error. "./src/include/mpiimpl.h", line 2785.5: 1506-343 (S) Redeclaration of MPID_Send differs from previous declaration on line 2760 of "./src/include/mpiimpl.h". "./src/include/mpiimpl.h", line 2785.5: 1506-377 (I) The type "int" of parameter 2 differs from the previous type "long". "./src/include/mpiimpl.h", line 2884.5: 1506-343 (S) Redeclaration of MPID_Isend differs from previous declaration on line 2865 of "./src/include/mpiimpl.h". "./src/include/mpiimpl.h", line 2884.5: 1506-377 (I) The type "int" of parameter 2 differs from the previous type "long". "./src/include/mpitimpl.h", line 245.5: 1506-046 (S) Syntax error. "./src/include/mpitimpl.h", line 900.40: 1506-022 (S) "total" is not a member of "struct {...}". "/homeb/zam/scprod/mstephan/mpich3/mpich- 3.2/src/mpid/pamid/include/../src/mpid_request.h", line 156.21: 1506-022 (S) "cc" is not a member of "struct MPID_Request". "/homeb/zam/scprod/mstephan/mpich3/mpich- 3.2/src/mpid/pamid/include/../src/mpid_request.h", line 157.8: 1506-022 (S) "cc_ptr" is not a member of "struct MPID_Request". "/homeb/zam/scprod/mstephan/mpich3/mpich- 3.2/src/mpid/pamid/include/../src/mpid_request.h", line 157.23: 1506-022 (S) "cc" is not a member of "struct MPID_Request". "/homeb/zam/scprod/mstephan/mpich3/mpich- 3.2/src/mpid/pamid/include/../src/mpid_request.h", line 283.62: 1506-099 (S) Unexpected argument. "/homeb/zam/scprod/mstephan/mpich3/mpich- 3.2/src/mpid/pamid/include/../src/mpid_request.h", line 326.23: 1506-022 (S) "cc_ptr" is not a member of "struct MPID_Request". "/homeb/zam/scprod/mstephan/mpich3/mpich- 3.2/src/mpid/pamid/include/../src/mpid_request.h", line 341.23: 1506-022 (S) "cc_ptr" is not a member of "struct MPID_Request". "/homeb/zam/scprod/mstephan/mpich3/mpich- 3.2/src/mpid/pamid/include/mpidpost.h", line 56.44: 1506-022 (S) "vcr" is not a member of "struct MPID_Comm". "/homeb/zam/scprod/mstephan/mpich3/mpich- 3.2/src/mpid/pamid/include/mpidpost.h", line 83.43: 1506-022 (S) "vcrt" is not a member of "struct MPID_Comm". "/homeb/zam/scprod/mstephan/mpich3/mpich- 3.2/src/mpid/pamid/include/mpidpost.h", line 84.37: 1506-022 (S) "vcrt" is not a member of "struct MPID_Comm". "/homeb/zam/scprod/mstephan/mpich3/mpich- 3.2/src/mpid/pamid/include/mpidpost.h", line 84.57: 1506-022 (S) "vcr" is not a member of "struct MPID_Comm". "/homeb/zam/scprod/mstephan/mpich3/mpich- 3.2/src/mpid/pamid/include/mpidpost.h", line 91.42: 1506-022 (S) "vcr" is not a member of "struct MPID_Comm". "/homeb/zam/scprod/mstephan/mpich3/mpich- 3.2/src/mpid/pamid/include/mpidpost.h", line 92.41: 1506-022 (S) "vcr" is not a member of "struct MPID_Comm". "src/mpi/attr/attr_delete.c", line 65.26: 1506-045 (S) Undeclared identifier GLOBAL. make[2]: *** [src/mpi/attr/lib_libmpi_la-attr_delete.lo] Error 1 make[2]: Leaving directory `/homeb/zam/scprod/mstephan/mpich3/mpich-3.2' make[1]: *** [all-recursive] Error 1 make[1]: Leaving directory `/homeb/zam/scprod/mstephan/mpich3/mpich-3.2' make: *** [all] Error 2
Is there something obvious that we missed?
Cheers, Marc-Andre
-- Marc-Andre Hermanns Jülich Aachen Research Alliance, High Performance Computing (JARA-HPC) Jülich Supercomputing Centre (JSC)
Wilhelm-Johnen-Str. 52425 Jülich Germany
Phone: +49 2461 61 2509 | +49 241 80 24381 Fax: +49 2461 80 6 99753 www.jara.org/jara-hpc email: [email protected]
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pramod kumbhar