autogen.sh is only for developers and you shouldn't have to run that. This typically happens if your timestamps are messed up, e.g., you untarred the download on one machine and tried to build it on another and the timestamps between the two machines don't match. -- Pavan

On May 4, 2018, at 12:38 PM, Jan Marek Szubert <[email protected]> wrote:

make fais when : tries to open a non-existent dir on /tmp/

I have spent a few days trying to determine the reason for the failure. If anything should be clear from the attached log files I would appreciate the heads up.

The config.log file is nearly half a megabyte, otherwise, I would have included it also. I am still wading through the strace output, but it is rather overwhelming.

gcc (Ubuntu 5.4.0-6ubuntu1~16.04.9) 5.4.0 20160609

configure and make output files attached.

CC src/util/other/lib_libmpi_la-assert.lo ( cd . && ./maint/extractcvars --dirs="`cat ./maint/cvardirs`") Error: open directory /tmp/_HMuTRgPPE/mpich-3.2.1/maint/../src/mpi -- No such file or directory Makefile:39284: recipe for target 'src/util/cvar/mpich_cvars.c' failed make[2]: *** [src/util/cvar/mpich_cvars.c] Error 2 make[2]: Leaving directory '/home/jan/amber18/AmberTools/src/mpich-3.2.1' Makefile:38608: recipe for target 'all-recursive' failed make[1]: *** [all-recursive] Error 1 make[1]: Leaving directory '/home/jan/amber18/AmberTools/src/mpich-3.2.1' Makefile:10337: recipe for target 'all' failed make: *** [all] Error 2

below is the make file code close to line 39284. I have underlined the corresponding log file output and the make file line 39284

# normally built by autogen.sh, but this rebuild rule is here

$(top_srcdir)/src/util/cvar/mpich_cvars.c: $(top_srcdir)/maint/extractcvars

( cd $(top_srcdir) && $(top_srcdir)/maint/extractcvars --dirs="`cat $(top_srcdir)/maint/cvardirs`")

$(cxx_buildiface_out_files): src/binding/cxx/buildiface-stamp src/binding/cxx/buildiface-stamp: $(top_srcdir)/src/binding/cxx/buildiface $(top_srcdir)/src/include/mpi.h.in

( cd $(top_srcdir)/src/binding/cxx && ./buildiface -nosep -initfile=cxx.vlist )

If you are able to provide any pointers it would be much appreciated..

Jan Szubert

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