Re: [mpich-discuss] Assertion failed in file src/mpid/ch3/src/ch3u_handle_send_req.c at line 61 (RMA && Derived datatypes)&In-Reply-To=<0A407957589BAB4F924824150C4293EF588072EC@CITESMBX2.ad.uillinois.edu>
Dear Pavan, thank you for hints! Ok, I was able to install MXM locally without root privileges. Then I have configured and compiled MPICH3 with MXM. Everything went smoothly and finally I got a working binaries and libs. Unfortunately, root is still needed because a simple MPI HELLO WORLD code now crashes with the following error message: %mpirun -np 2 ./a.out [1415719636.245549] [n1:37817:0] shm.c:65 MXM WARN Could not open the KNEM device file at /dev/knem : No such file or directory. Won't use knem. [1415719636.245549] [n1:37818:0] shm.c:65 MXM WARN Could not open the KNEM device file at /dev/knem : No such file or directory. Won't use knem. [1415719636.263914] [n1:37817:0] ib_dev.c:443 MXM ERROR ibv_query_device() returned 38: No such file or directory [1415719636.264134] [n1:37818:0] ib_dev.c:443 MXM ERROR ibv_query_device() returned 38: No such file or directory Fatal error in MPI_Init: Other MPI error, error stack: MPIR_Init_thread(498).........: MPID_Init(187)................: channel initialization failed MPIDI_CH3_Init(89)............: MPID_nem_init(320)............: MPID_nem_mxm_init(157)........: MPID_nem_mxm_vc_terminate(451): mxm_init failed (Input/output error) Fatal error in MPI_Init: Other MPI error, error stack: MPIR_Init_thread(498).........: MPID_Init(187)................: channel initialization failed MPIDI_CH3_Init(89)............: MPID_nem_init(320)............: MPID_nem_mxm_init(157)........: MPID_nem_mxm_vc_terminate(451): mxm_init failed (Input/output error) %ldd a.out linux-vdso.so.1 => (0x00007ffff29ff000) libmpi.so.12 => /nobackup/global/x_vicvy/mpich3-dev-bin.mxm/lib/libmpi.so.12 (0x00007f9fd4fa1000) libm.so.6 => /lib64/libm.so.6 (0x00007f9fd4cfe000) libgcc_s.so.1 => /lib64/libgcc_s.so.1 (0x00007f9fd4ae8000) libc.so.6 => /lib64/libc.so.6 (0x00007f9fd4754000) libdl.so.2 => /lib64/libdl.so.2 (0x00007f9fd454f000) libmxm.so.2 => /nobackup/global/x_vicvy/hpcx-v1.2.0-255-icc-MLNX_OFED_LINUX-2.3-1.5.0-redhat6.5/mxm/lib/libmxm.so.2 (0x00007f9fd41f5000) libz.so.1 => /lib64/libz.so.1 (0x00007f9fd3fdf000) libibverbs.so.1 => /usr/lib64/libibverbs.so.1 (0x00007f9fd3dd1000) librt.so.1 => /lib64/librt.so.1 (0x00007f9fd3bc9000) libgpfs.so => /usr/lib64/libgpfs.so (0x00007f9fd39ba000) libpthread.so.0 => /lib64/libpthread.so.0 (0x00007f9fd379c000) libifport.so.5 => /software/apps/intel/composer_xe_2015.0.090/compiler/lib/intel64/libifport.so.5 (0x00007f9fd356f000) libifcore.so.5 => /software/apps/intel/composer_xe_2015.0.090/compiler/lib/intel64/libifcore.so.5 (0x00007f9fd3239000) libimf.so => /software/apps/intel/composer_xe_2015.0.090/compiler/lib/intel64/libimf.so (0x00007f9fd2d7e000) libsvml.so => /software/apps/intel/composer_xe_2015.0.090/compiler/lib/intel64/libsvml.so (0x00007f9fd212f000) libintlc.so.5 => /software/apps/intel/composer_xe_2015.0.090/compiler/lib/intel64/libintlc.so.5 (0x00007f9fd1ed5000) /lib64/ld-linux-x86-64.so.2 (0x00007f9fd5499000) libirng.so => /software/apps/intel/composer_xe_2015.0.090/compiler/lib/intel64/libirng.so (0x00007f9fd1ccd000) Since ’nemesis:ch3:ib’ is fixed, I will check it out. With best regards, Victor. _______________________________________________ discuss mailing list [email protected] To manage subscription options or unsubscribe: https://lists.mpich.org/mailman/listinfo/discuss
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Victor Vysotskiy