Re: [mpich-discuss] MPICH 5.0.1 performance on HPE SS11 plus more - a slurm problem
Here you go Hui! MPICH debug output and slurm steps output to boot. Again no such slurmy errors with the 4.3.1 release. Something must have changed in the way MPICH is using the PMIX group constructor ops or something like that. Required minimum FI_VERSION: 0, current version: 10016 provider: cxi, score = 5, pref = 0, FI_FORMAT_UNSPEC [8] provider: cxi, score = 5, pref = 0, FI_FORMAT_UNSPEC [8] provider: cxi, score = 5, pref = 0, FI_FORMAT_UNSPEC [8] provider: cxi, score = 5, pref = 0, FI_FORMAT_UNSPEC [8] provider: cxi, score = 5, pref = 0, FI_FORMAT_UNSPEC [8] provider: cxi, score = 5, pref = 0, FI_FORMAT_UNSPEC [8] provider: cxi, score = 5, pref = 0, FI_FORMAT_UNSPEC [8] provider: cxi, score = 5, pref = 0, FI_FORMAT_UNSPEC [8] provider: cxi, score = 5, pref = 0, FI_FORMAT_UNSPEC [8] provider: cxi, score = 5, pref = 0, FI_FORMAT_UNSPEC [8] provider: cxi, score = 5, pref = 0, FI_FORMAT_UNSPEC [8] provider: cxi, score = 5, pref = 0, FI_FORMAT_UNSPEC [8] provider: cxi, score = 5, pref = 0, FI_FORMAT_UNSPEC [8] provider: cxi, score = 5, pref = 0, FI_FORMAT_UNSPEC [8] provider: cxi, score = 5, pref = 0, FI_FORMAT_UNSPEC [8] provider: cxi, score = 5, pref = 0, FI_FORMAT_UNSPEC [8] Required minimum FI_VERSION: 10005, current version: 10016 ==== Capability set configuration ==== libfabric provider: cxi - cxi MPIDI_OFI_ENABLE_DATA: 1 MPIDI_OFI_ENABLE_AV_TABLE: 1 MPIDI_OFI_ENABLE_SCALABLE_ENDPOINTS: 0 MPIDI_OFI_ENABLE_SHARED_CONTEXTS: 0 MPIDI_OFI_ENABLE_MR_VIRT_ADDRESS: 0 MPIDI_OFI_ENABLE_MR_ALLOCATED: 1 MPIDI_OFI_ENABLE_MR_REGISTER_NULL: 0 MPIDI_OFI_ENABLE_MR_PROV_KEY: 0 MPIDI_OFI_ENABLE_TAGGED: 1 MPIDI_OFI_ENABLE_AM: 1 MPIDI_OFI_ENABLE_RMA: 1 MPIDI_OFI_ENABLE_ATOMICS: 1 MPIDI_OFI_FETCH_ATOMIC_IOVECS: 1 MPIDI_OFI_ENABLE_DATA_AUTO_PROGRESS: 0 MPIDI_OFI_ENABLE_CONTROL_AUTO_PROGRESS: 0 MPIDI_OFI_ENABLE_PT2PT_NOPACK: 1 MPIDI_OFI_ENABLE_TRIGGERED: 0 MPIDI_OFI_ENABLE_HMEM: 0 MPIDI_OFI_NUM_AM_BUFFERS: 8 MPIDI_OFI_NUM_OPTIMIZED_MEMORY_REGIONS: 0 MPIDI_OFI_CONTEXT_BITS: 20 MPIDI_OFI_SOURCE_BITS: 0 MPIDI_OFI_TAG_BITS: 20 MPIDI_OFI_VNI_USE_DOMAIN: 1 MAXIMUM SUPPORTED RANKS: 4294967296 MAXIMUM TAG: 1048576 ==== Provider global thresholds ==== max_buffered_send: 192 max_buffered_write: 192 max_msg_size: 4294967295 max_order_raw: -1 max_order_war: -1 max_order_waw: -1 tx_iov_limit: 1 rx_iov_limit: 1 rma_iov_limit: 1 max_mr_key_size: 4 ==== Various sizes and limits ==== MPIDI_OFI_AM_MSG_HEADER_SIZE: 24 MPIDI_OFI_MAX_AM_HDR_SIZE: 255 sizeof(MPIDI_OFI_am_request_header_t): 416 sizeof(MPIDI_OFI_per_vci_t): 52480 MPIDI_OFI_AM_HDR_POOL_CELL_SIZE: 1024 MPIDI_OFI_DEFAULT_SHORT_SEND_SIZE: 16384 ====================================== slurmstepd: error: mpi/pmix_v4: pmixp_coll_belong_chk: nid001406 [1]: pmixp_coll.c:280: No process controlled by this slurmstepd is involved in this collective. slurmstepd: error: mpi/pmix_v4: _process_server_request: nid001406 [1]: pmixp_server.c:923: Unable to pmixp_state_coll_get() slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_check: nid001405 [0]: pmixp_coll_ring.c:614: 0x14b448006e10: unexpected contrib from nid001406:1, expected is 0 slurmstepd: error: mpi/pmix_v4: _process_server_request: nid001405 [0]: pmixp_server.c:937: 0x14b448006e10: unexpected contrib from nid001406:1, coll->seq=0, seq=0 slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_reset_if_to: nid001405 [0]: pmixp_coll_ring.c:738: 0x14b454052fc0: collective timeout seq=0 slurmstepd: error: mpi/pmix_v4: pmixp_coll_log: nid001405 [0]: pmixp_coll.c:286: Dumping collective state slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001405 [0]: pmixp_coll_ring.c:756: 0x14b454052fc0: COLL_FENCE_RING state seq=0 slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001405 [0]: pmixp_coll_ring.c:758: my peerid: 0:nid001405 slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001405 [0]: pmixp_coll_ring.c:765: neighbor id: next 1:nid001406, prev 1:nid001406 slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001405 [0]: pmixp_coll_ring.c:775: Context ptr=0x14b454053038, #0, in-use=0 slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001405 [0]: pmixp_coll_ring.c:775: Context ptr=0x14b454053070, #1, in-use=0 slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001405 [0]: pmixp_coll_ring.c:775: Context ptr=0x14b4540530a8, #2, in-use=1 slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001405 [0]: pmixp_coll_ring.c:786: seq=0 contribs: loc=1/prev=0/fwd=1 slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001405 [0]: pmixp_coll_ring.c:788: neighbor contribs [2]: slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001405 [0]: pmixp_coll_ring.c:821: done contrib: - slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001405 [0]: pmixp_coll_ring.c:823: wait contrib: nid001406 slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001405 [0]: pmixp_coll_ring.c:825: status=PMIXP_COLL_RING_PROGRESS slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001405 [0]: pmixp_coll_ring.c:829: buf (offset/size): 36/16384 slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_reset_if_to: nid001406 [1]: pmixp_coll_ring.c:738: 0x14aa28053100: collective timeout seq=0 slurmstepd: error: mpi/pmix_v4: pmixp_coll_log: nid001406 [1]: pmixp_coll.c:286: Dumping collective state slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001406 [1]: pmixp_coll_ring.c:756: 0x14aa28053100: COLL_FENCE_RING state seq=0 slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001406 [1]: pmixp_coll_ring.c:758: my peerid: 1:nid001406 slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001406 [1]: pmixp_coll_ring.c:765: neighbor id: next 0:nid001405, prev 0:nid001405 slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001406 [1]: pmixp_coll_ring.c:775: Context ptr=0x14aa28053178, #0, in-use=0 slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001406 [1]: pmixp_coll_ring.c:775: Context ptr=0x14aa280531b0, #1, in-use=0 slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001406 [1]: pmixp_coll_ring.c:775: Context ptr=0x14aa280531e8, #2, in-use=1 slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001406 [1]: pmixp_coll_ring.c:786: seq=0 contribs: loc=1/prev=0/fwd=1 slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001406 [1]: pmixp_coll_ring.c:788: neighbor contribs [2]: slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001406 [1]: pmixp_coll_ring.c:821: done contrib: - slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001406 [1]: pmixp_coll_ring.c:823: wait contrib: nid001405 slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001406 [1]: pmixp_coll_ring.c:825: status=PMIXP_COLL_RING_PROGRESS slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001406 [1]: pmixp_coll_ring.c:829: buf (offset/size): 36/16384 ==== Various sizes and limits ==== sizeof(MPIDI_per_vci_t): 128 ==== collective selection ==== MPIR_CVAR_DEVICE_COLLECTIVES: percoll MPIR: MPII_coll_generic_json MPID: MPIDI_coll_generic_json MPID/shm: MPIDI_POSIX_coll_generic_json ==== OFI dynamic settings ==== num_vcis: 1 num_nics: 1 ====================================== error checking : disabled QMPI : disabled debugger support : disabled thread level : MPI_THREAD_SINGLE thread CS : per-vci threadcomm : enabled ==== data structure summary ==== sizeof(MPIR_Comm): 1832 sizeof(MPIR_Request): 520 sizeof(MPIR_Datatype): 280 ================================ # OSU MPI Latency Test v5.8 # Size Latency (us) 0 2.04 1 10.08 2 10.10 4 10.11 8 10.12 16 10.12 32 10.13 64 10.12 128 10.67 256 8.10 512 8.18 1024 8.11 2048 7.86 4096 7.80 8192 10.25 16384 11.04 32768 12.04 65536 14.05 131072 17.89 262144 24.61 524288 37.51 1048576 61.48 2097152 110.06 4194304 228.67 Am Mi., 13. Aug. 2025 um 13:10 Uhr schrieb Zhou, Hui <[email protected]>:
Hi Howard,
Could you run with `MPIR_CVAR_DEBUG_SUMMARY=1`? It should print some debug messages. I want to confirm it is running the `cxi` provider.
Hui ------------------------------ *From:* Howard Pritchard <[email protected]> *Sent:* Wednesday, July 30, 2025 4:37 PM *To:* Thakur, Rajeev <[email protected]> *Cc:* [email protected] <[email protected]>; Zhou, Hui <[email protected]> *Subject:* Re: [mpich-discuss] MPICH 5.0.1 performance on HPE SS11 plus more - a slurm problem
You don't often get email from [email protected]. Learn why this is important <https://urldefense.us/v3/__https://aka.ms/LearnAboutSenderIdentification__;!... > Hi Rajeev, Here are the results for 4. 3. x branch: hpp@ nid001293: /usr/projects/artab/users/hpp/osu-micro-benchmarks-5. 8-mpich/mpi/pt2pt>srun --mpi=pmix -n 2 ./osu_latency # OSU MPI Latency Test v5. 8 # Size Latency (us) 0 1. 92 1 1. 98 2 1. 98 ZjQcmQRYFpfptBannerStart This Message Is From an External Sender This message came from outside your organization.
ZjQcmQRYFpfptBannerEnd Hi Rajeev,
Here are the results for 4.3.x branch:
hpp@nid001293:/usr/projects/artab/users/hpp/osu-micro-benchmarks-5.8-mpich/mpi/pt2pt>srun --mpi=pmix -n 2 ./osu_latency
# OSU MPI Latency Test v5.8
# Size Latency (us)
0 1.92
1 1.98
2 1.98
4 1.98
8 1.98
16 1.98
32 1.99
64 1.99
128 2.47
256 2.59
512 2.65
1024 2.76
2048 2.95
4096 3.00
8192 5.96
16384 6.64
32768 7.44
65536 8.75
131072 11.52
262144 17.08
524288 27.96
1048576 49.38
2097152 92.96
4194304 179.74
These are more like i would expect for SS11/OFI CXI provider.
Howard
Am Mi., 30. Juli 2025 um 12:48 Uhr schrieb Thakur, Rajeev <[email protected]
:
Hi Howard,
What was the latency with the 4.3.x branch?
Rajeev
*From: *Howard Pritchard via discuss <[email protected]> *Reply-To: *"[email protected]" <[email protected]> *Date: *Wednesday, July 30, 2025 at 1:43 PM *To: *"Zhou, Hui" <[email protected]> *Cc: *Howard Pritchard <[email protected]>, "[email protected]" < [email protected]> *Subject: *Re: [mpich-discuss] MPICH 5.0.1 performance on HPE SS11 plus more - a slurm problem
Hi Hui That didn’t help. I am not surprised though as our cluster is an NVIDIA free zone. What did help is to switch to the mpich 4. 3. x branch and latency results are nominal and the slurm problem went away too. So we will stick with that branch.
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This message came from outside your organization.
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Hi Hui
That didn’t help. I am not surprised though as our cluster is an NVIDIA free zone. What did help is to switch to the mpich 4.3.x branch and latency results are nominal and the slurm problem went away too. So we will stick with that branch.
Howard
On Mon, Jul 28, 2025 at 4:15 PM Zhou, Hui <[email protected]> wrote:
Hi Howard,
I wonder whether it is due to the overhead of querying pointer attributes. Could you try disable GPU support with `MPIR_CVAR_ENABLE_GPU=0` and see if the latency improves?
Hui ------------------------------
*From:* Howard Pritchard via discuss <[email protected]> *Sent:* Monday, July 28, 2025 9:41 AM *To:* [email protected] <[email protected]> *Cc:* Howard Pritchard <[email protected]> *Subject:* [mpich-discuss] MPICH 5.0.1 performance on HPE SS11 plus more - a slurm problem
Hi Folks, We are seeing a strange performance issue on our HPE SS11 system when testing osu_latency inter-node with MPICH. First the info: system using libfabric 1. 22. 0 slurm - 24. 11. 5 Here's my mpichversion output: MPICH Version: 5. 0. 0a1
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Hi Folks,
We are seeing a strange performance issue on our HPE SS11 system when testing osu_latency inter-node with MPICH.
First the info:
system using libfabric 1.22.0
slurm - 24.11.5
Here's my mpichversion output:
MPICH Version: 5.0.0a1
MPICH Release date: unreleased development copy
MPICH ABI: 0:0:0
MPICH Device: ch4:ofi
MPICH configure: --prefix=/XXXX/mpich_again/install --enable-g=no --enable-error-checking=no --with-device=ch4:ofi --enable-threads=multiple --with-ch4-shmmods=posix,xpmem --enable-thread-cs=per-vci --with-libfabric=/opt/cray/libfabric/1.22.0 --with-xpmem=/opt/cray/xpmem/default --with-pmix=/opt/pmix/gcc4x/5.0.8 --enable-fast=O3
MPICH CC: gcc -O3
MPICH CXX: g++ -O3
MPICH F77: gfortran -O3
MPICH FC: gfortran -O3
MPICH features: threadcomm
And here's the OSU latency results:
slurmstepd: error: mpi/pmix_v4: pmixp_coll_belong_chk: nid001439 [1]: pmixp_coll.c:280: No process controlled by this slurmstepd is involved in this collective.
slurmstepd: error: mpi/pmix_v4: _process_server_request: nid001439 [1]: pmixp_server.c:923: Unable to pmixp_state_coll_get()
slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_check: nid001438 [0]: pmixp_coll_ring.c:614: 0x15005c005dc0: unexpected contrib from nid001439:1, expected is 0
slurmstepd: error: mpi/pmix_v4: _process_server_request: nid001438 [0]: pmixp_server.c:937: 0x15005c005dc0: unexpected contrib from nid001439:1, coll->seq=0, seq=0
slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_reset_if_to: nid001438 [0]: pmixp_coll_ring.c:738: 0x1500580532f0: collective timeout seq=0
slurmstepd: error: mpi/pmix_v4: pmixp_coll_log: nid001438 [0]: pmixp_coll.c:286: Dumping collective state
slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001438 [0]: pmixp_coll_ring.c:756: 0x1500580532f0: COLL_FENCE_RING state seq=0
slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001438 [0]: pmixp_coll_ring.c:758: my peerid: 0:nid001438
slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001438 [0]: pmixp_coll_ring.c:765: neighbor id: next 1:nid001439, prev 1:nid001439
slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001438 [0]: pmixp_coll_ring.c:775: Context ptr=0x150058053368, #0, in-use=0
slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001438 [0]: pmixp_coll_ring.c:775: Context ptr=0x1500580533a0, #1, in-use=0
slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001438 [0]: pmixp_coll_ring.c:775: Context ptr=0x1500580533d8, #2, in-use=1
slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001438 [0]: pmixp_coll_ring.c:786: seq=0 contribs: loc=1/prev=0/fwd=1
slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001438 [0]: pmixp_coll_ring.c:788: neighbor contribs [2]:
slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001438 [0]: pmixp_coll_ring.c:821: done contrib: -
slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001438 [0]: pmixp_coll_ring.c:823: wait contrib: nid001439
slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001438 [0]: pmixp_coll_ring.c:825: status=PMIXP_COLL_RING_PROGRESS
slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001438 [0]: pmixp_coll_ring.c:829: buf (offset/size): 36/16384
slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_reset_if_to: nid001439 [1]: pmixp_coll_ring.c:738: 0x151d0c053400: collective timeout seq=0
slurmstepd: error: mpi/pmix_v4: pmixp_coll_log: nid001439 [1]: pmixp_coll.c:286: Dumping collective state
slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001439 [1]: pmixp_coll_ring.c:756: 0x151d0c053400: COLL_FENCE_RING state seq=0
slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001439 [1]: pmixp_coll_ring.c:758: my peerid: 1:nid001439
slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001439 [1]: pmixp_coll_ring.c:765: neighbor id: next 0:nid001438, prev 0:nid001438
slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001439 [1]: pmixp_coll_ring.c:775: Context ptr=0x151d0c053478, #0, in-use=0
slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001439 [1]: pmixp_coll_ring.c:775: Context ptr=0x151d0c0534b0, #1, in-use=0
slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001439 [1]: pmixp_coll_ring.c:775: Context ptr=0x151d0c0534e8, #2, in-use=1
slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001439 [1]: pmixp_coll_ring.c:786: seq=0 contribs: loc=1/prev=0/fwd=1
slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001439 [1]: pmixp_coll_ring.c:788: neighbor contribs [2]:
slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001439 [1]: pmixp_coll_ring.c:821: done contrib: -
slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001439 [1]: pmixp_coll_ring.c:823: wait contrib: nid001438
slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001439 [1]: pmixp_coll_ring.c:825: status=PMIXP_COLL_RING_PROGRESS
slurmstepd: error: mpi/pmix_v4: pmixp_coll_ring_log: nid001439 [1]: pmixp_coll_ring.c:829: buf (offset/size): 36/16384
# OSU MPI Latency Test v5.8
# Size Latency (us)
0 1.66
1 9.29
2 9.57
4 9.69
8 9.76
16 9.77
32 9.76
64 9.77
128 10.32
256 7.54
512 7.45
1024 7.38
2048 7.37
4096 7.45
8192 9.21
16384 9.70
32768 10.63
65536 13.15
131072 16.96
262144 23.84
524288 36.16
1048576 60.36
2097152 108.43
4194304 228.31
Note the slurm behavior is - I launch the job. Go get coffee, do some duo-lingo, read some emails, then after about 10 minutes the osu latency runs.
I did not get the slurm problems using an older mpich 4.3.1 but did get the same performance issue. 9 usecs doesn't seem right for an 8-byte pingpong over libfabric S11. I was expecting more like 1.6 or so.
I am confident the slurm issue is unrelated to the latency issue.
Thanks for any suggestions on how to address either issue however.
participants (1)
-
Howard Pritchard