Re: [mpich-discuss] MPI_Waitany got abort signal.
Hi Anatoly, Without a reproducible simple case, it will be difficult to pin down the issue. To debug, I would start injecting prints right above the assertion to see what is actually in the pkt_type. But since mpich-3.1 is very old, can you try a newer release? The latest is mpich 4.0b1 -- https://www.mpich.org/downloads/ -- Hui Zhou [https://www.mpich.org/files/2012/10/rnd100_home.jpg1zB]<https://www.mpich.org/downloads/> Downloads | MPICH<https://www.mpich.org/downloads/> Downloads MPICH is distributed under a BSD-like license. NOTE: MPICH binary packages are available in many UNIX distributions and for Windows. For example, you can search for it using “yum” (on Fedora), “apt” (Debian/Ubuntu), “pkg_add” (FreeBSD) or “port”/”brew” (Mac OS). www.mpich.org ________________________________ From: Anatoly G via discuss <[email protected]> Sent: Wednesday, November 24, 2021 3:49 AM To: [email protected] <[email protected]> Cc: Anatoly G <[email protected]> Subject: [mpich-discuss] MPI_Waitany got abort signal. Hello Mpich, I use mpich-3.1 on Ubuntu 14. Each process has complicated logic except process 0. Process 0 is used as a router to communicate with an application and broadcast/collect results from other processes. During night runs, sometimes I see a single failure of process with rank 0. From process 0 I get wallowing print: Assertion failed in file src/mpid/ch3/channels/nemesis/netmod/tcp/socksm.c at line 596: hdr.pkt_type == MPIDI_NEM_TCP_SOCKSM_PKT_ID_INFO || hdr.pkt_type == MPIDI_NEM_TCP_SOCKSM_PKT_TMPVC_INFO internal ABORT - process 0 *** Error in `/export/home/fpd/versions/current_ver/third_party/MPI_Scheduler': double free or corruption (fasttop): 0x00007f27003f59a0 *** Stack trace: 2d40 /lib/x86_64-linux-gnu/libc.so.6(+0x36d40) [0x7f2712ff2d40] gsignal + 57 abort + 328 f394 /lib/x86_64-linux-gnu/libc.so.6(+0x73394) [0x7f271302f394] b66e /lib/x86_64-linux-gnu/libc.so.6(+0x7f66e) [0x7f271303b66e] std::basic_string<char, std::char_traits<char>, std::allocator<char> >::~basic_string() + 31 8259 /lib/x86_64-linux-gnu/libc.so.6(+0x3c259) [0x7f2712ff8259] 82a5 /lib/x86_64-linux-gnu/libc.so.6(+0x3c2a5) [0x7f2712ff82a5] d049 /export/home/fpd/versions/current_ver/third_party/libMPIServices.so(+0x224049) [0x7f2714bdd049] MPID_Abort + 103 MPIR_Assert_fail + 37 d598 /export/home/fpd/versions/current_ver/third_party/libMPIServices.so(+0x244598) [0x7f2714bfd598] MPID_nem_tcp_connpoll + 366 MPIDI_CH3I_Progress + 1408 MPI_Waitany + 1072 From the rest of processes I get: terminate called after throwing an instance of 'int' s/netmod/tcp/socksm.c at line 596: hdr.pkt_type == MPIDI_NEM_TCP_SOCKSM_PKT_ID_INFO || hdr.pkt_type == MPIDI_NEM_TCP_SOCKSM_PKT_TMPVC_INFO internal ABORT - process 1 *** Error in `Scheduler': double free or corruption (fasttop): 0x0000000003e16d60 *** Unfortunately, I can't reproduce this failure on a simplified system. Even on a real system failure can happen once in at night. We have a memory monitor which shows that we have free memory on the computer. Can you please advise me, what can be the reason for failure? Regards, Anatoly.
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Zhou, Hui