OK, Will just pointed me at the '&sims=1' trick to get the extended download page. Is this feature going to be released to our users in 3.1?

Mark


On May 31, 2011, at 4:41 PM, Mark D'Souza wrote:

Hi Travis,  (or anyone else familiar with this operation)

Is it possible to get all read annotations for a job through the 3.1 workbench?

Thanks,

Mark

On May 31, 2011, at 2:36 PM, Aaron Garoutte wrote:

Hello MG-RAST Team

I put some assemblies through your pipeline.  Now that I have the contigs annotated I would like to go back and map my raw reads to the contigs to get a better measure of abundance.  To do this I need to know how each contig has been annotated.  I found (under metagenome downloads) the gene clustering file.  This lists the contigs that cluster together and has, what I assume is a group name like aa90_105.  So my question is, this there a file I can download that links the clustered contigs (via the cluster name) to the subsystem annotation?

As always thanks for your help

Aaron