If the Genbank file has EC numbers, it should not be a problem. Cheers Tobi On Jul 26, 2011, at 12:07 PM, Mark DSouza wrote:

Tobi,

Would it be possible to allow the user to do this (see user email below)?

Maybe upload a file with the relevant information and create the comparison to a metagenome for them? Or just have the KEGG data downloadable so that they can do this themselves.

Mark

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From: "Stephen Mondo" <[email protected]> To: [email protected] Sent: Tuesday, July 26, 2011 10:55:32 AM Subject: [mg-rast] Any way to upload genbank genomes for KEGG comparison? Dear MG-RAST, I have uploaded my data and am interested in seeing how my KEGG pathways overlap with a particular genome which is deposited in Genbank (ie data A = my metagenome, data B = Genbank genome). Is this feature available? If not, where should I look to find such a comparison?

Thanks a lot, Stephen