Hi Helen, I see a new MG-RAST job under your name which is queued for the first processing step. Until this step is completed the job will not be visible to you, are you interpreting this as a failed upload? There should be no contig length limit to 2Kbp for submission to MG-RAST, in fact the current version works best with small fragments. Regards, Mark D'Souza -- for the MG-RAST team [email protected] http://metagenomics.nmpdr.org/ On Mon, 27 Apr 2009, Helen White wrote:

Hi I am trying to upload a fasta file to MG-RAST of a metagenome, but my contigs are only ~800bp. Is it possible to make an exception to the 2Kbp contig length rule for this sample? Thanks for any help you can offer Best, Helen