Re: [mg-rast] MG-Rast uploading problem
Hi, Your latest upload worked correctly, the fasta file and quality file are paired and you can now create the job (you could also delete the other two files). Regards, Mark On Aug 25, 2011, at 3:11 PM, Fei Luo wrote:
Hi Mark,
Yes I have tried that. But still, I cannot extract the qual file... Any other hint?
Thanks,
Fei
On 11-08-25 3:43 PM, "Mark DSouza" <[email protected]> wrote:
Hi,
The problem is with the naming of the quality file, you will need to rename your files so that they are named as 'polished_trial2.fasta' and 'polished_trial2.qual' with a common prefix 'polished_trial2'. The names in your zipped file are not getting matched correctly and the qual file is getting treated as a fasta file, causing the error.
Regards, Mark
----- Original Message -----
From: "Fei Luo" <[email protected]> To: "Mark DSouza" <[email protected]> Sent: Thursday, August 25, 2011 2:30:53 PM Subject: Re: [mg-rast] MG-Rast uploading problem Hi,
Oh sorry I forgot... I was using the account laura.hug
Thanks!
Fei
On 11-08-25 3:25 PM, "Mark DSouza" <[email protected]> wrote:
Hi,
Could you provide us with the username for the account you are using for the upload? I did not find a record of uploads for the username associated with this email address.
-- Regards, Mark D'Souza -- for the MG-RAST team
[email protected] http://metagenomics.anl.gov/
If you need to respond to this email please address it to the mailing-list [email protected]
----- Original Message -----
From: "Fei Luo" <[email protected]> To: [email protected] Sent: Thursday, August 25, 2011 2:18:43 PM Subject: [mg-rast] MG-Rast uploading problem Hi,
I am trying uploading some assembled contig files to MG-Rast for analysis. I was trying uploading a zip file including the fasta file and fasta.qual file with the same prefix. However, only the fasta file got extracted and there is always error information for qual file. Can you give me some suggestion about what was going on and how I can get it work?
Thanks!
Fei
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Mark D'Souza