Re: [mg-rast] problem with processing/uploading
Tanya, They is a bug in the system currently that if you reload the browser page immediately after uploading it resubmits it. Should be fixed shortly and we will clear out the cases that it has happend. The one having a error is likely due to some transient problems we have been working through with the new system. Cheers, Jared Wilkening - for the MG-RAST Development Team On Sat, Apr 2, 2011 at 10:21 AM, Tanya Yatsunenko <[email protected]> wrote:
Hello again
Thanks for fixing the previous issue. I have another one now: when I uploaded 2 metagenomes, on the 'browse metagenomes' page, 1 of them showed up as 3 jobs. I'm not sure if it's just an error on the webpage, or it was uploaded 2 or 3 times (although i pressed 'upload' only once). And there's no option to cancel the jobs. Interestingly, 1 of the duplicates shows an error (Finalizing data: error), but I couldn't find where can I see an error and how to fix it.
Thanks very much for your help.
Tanya.
On Wed, Mar 30, 2011 at 1:41 PM, Andreas Wilke <[email protected]> wrote:
Hi Tanya ,
unfortunately we had to change the location of a logfile for our database. This required a restart of the database. This does not require a re-annotation of your metagenomes.
Please let us know if you have still problems to access your metagenomes.
Regards,
Andreas Wilke
On Mar 30, 2011, at 11:42 AM, Tanya Yatsunenko wrote:
Hi
I've used MG RAST long time ago, and still have several metagenomes uploaded. However, when I tried to open "DAta Analysis" tab, I got this message:Can't locate auto/DBI/error.al in @INC (@INC contains: /mcs/bio/mg-rast/prod/FIGDisk/dist/releases/mgrast_release_3_0_2/common/lib /mcs/bio/mg-rast/prod/FIGDisk/dist/releases/mgrast_release_3_0_2/common/lib/FigKernelPackages /mcs/bio/mg-rast/prod/FIGDisk/dist/releases/mgrast_release_3_0_2/common/lib/WebApplication /mcs/bio/mg-rast/prod/FIGDisk/dist/releases/mgrast_release_3_0_2/common/lib/FortyEight /mcs/bio/mg-rast/prod/FIGDisk/dist/releases/mgrast_release_3_0_2/common/lib/PPO /mcs/bio/mg-rast/prod/FIGDisk/dist/releases/mgrast_release_3_0_2/common/lib/RAST /mcs/bio/mg-rast/prod/FIGDisk/dist/releases/mgrast_release_3_0_2/common/lib/MGRAST /mcs/bio/mg-rast/prod/FIGDisk/dist/releases/mgrast_release_3_0_2/common/lib/SeedViewer /mcs/bio/mg-rast/prod/FIGDisk/dist/releases/mgrast_release_3_0_2/common/lib/ModelSEED /mcs/bio/mg-rast/prod/FIGDisk/dist/dev/common/lib /mcs/bio/mg-rast/prod/FIGDisk/dist/dev/common/lib/FigKernelPackages /mcs/bio/mg-rast/prod/FIGDisk/config /mcs/bio/mg-rast/test/FIGDisk/dist/releases/current/common/lib /mcs/bio/mg-rast/test/FIGDisk/dist/releases/current/common/lib/FigKernelPackages /mcs/bio/mg-rast/test/FIGDisk/dist/releases/current/common/lib/WebApplication /mcs/bio/mg-rast/test/FIGDisk/dist/releases/current/common/lib/FortyEight /mcs/bio/mg-rast/test/FIGDisk/dist/releases/current/common/lib/PPO /mcs/bio/mg-rast/test/FIGDisk/config /soft/packages/perl/5.12.1/lib/site_perl/5.12.1/x86_64-linux-thread-multi /soft/packages/perl/5.12.1/lib/site_perl/5.12.1 /soft/packages/perl/5.12.1/lib/5.12.1/x86_64-linux-thread-multi /soft/packages/perl/5.12.1/lib/5.12.1 .) at /mcs/bio/mg-rast/prod/FIGDisk/dist/releases/mgrast_release_3_0_2/common/lib/Babel/lib/Babel.pm line 29
Does that mean that I have to re-annotate all my metagenomes, i.e. submit them as new jobs? Thank you
Tanya.
Andreas Wilke Argonne National Laboratory Mathematics and Computer Science Division Bldg. 240 , 4F8 9700 South Cass Avenue Argonne, IL 60439 (630) 252-3190 (phone) (630) 252-5986.(fax)
participants (1)
-
Jared Wilkening