Hello all,

Thanks for the replies, I think my log-file was too big even after compression and stuck in moderator approval for the list. But here is the part of the log-file where the problem starts. I have attached a google drive link which has the log file and .rea file, the Lewis Number is set in line 133 of the .rea file after parameter 128 (p128). Link - https://drive.google.com/open?id=1ozsy0IgVKuxDiplGl6CfYDn3GuhDWoWI


Solving for fluid F T T
       2071    Hmholtz TEMP:      1   1.1353E+00   5.5267E+00   7.0000E+00
       2071    Hmholtz PS 1:     13   5.5318E+00   3.8255E+21   7.0000E+00
  2071   100 **ERROR**: Failed in HMHOLTZ: PS 2   6.5359E+15   3.8255E+21   7.0000E+00
       2071    Hmholtz PS 3:     13   5.5318E+00   3.8255E+21   7.0000E+00
       2071   1.3076E+03  2.0528E+00 Heat done
       2071    Hmholtz VELX:     38   9.8896E-11   4.9469E+02   1.0000E-10
       2071    Hmholtz VELY:     38   9.2808E-11   4.4808E+02   1.0000E-10
       2071    Hmholtz VELZ:     38   8.0264E-11   4.6649E+02   1.0000E-10
        2071 reorthogo:           0
 2071    6 alpha:  9.1687E-01  4.2049E-02  6.7213E-03  2.4412E-03  1.0813E-03  1.7375E-03
  2071   6  1.7386E-01  1.3111E-03  1.3260E+02 alph12
      2071 U-PRES gmres:      5  7.5724E-09  1.0000E-08  4.0064E-08  7.3007E-02  3.7297E-01
        2071  DNORM, DIVEX  5.430060732380546E-007  7.572385434962068E-009
       2071   1.3076E+03  2.4498E+00 Fluid done
  2071 1 flx  1.307563E+03  5.633556E-02  1.121772E+04  1.174017E+04  5.092129E+02
  2071 2 flx  1.307563E+03  5.633556E-02 -1.122518E+04 -1.174681E+04  4.949962E+02
Step   2072, t= 1.3075634E+03, DT= 5.6082644E-05, C=  0.500 6.5792E+03 5.2920E+00
             Solving for heat
 Solving for fluid F T T
       2072    Hmholtz TEMP:      1   1.1351E+00   5.5225E+00   7.0000E+00
  2072   100 **ERROR**: Failed in HMHOLTZ: PS 1   3.2982E+26   3.0368E+40   7.0000E+00
  2072   100 **ERROR**: Failed in HMHOLTZ: PS 2   4.0048E+36   3.0365E+40   7.0000E+00
  2072   100 **ERROR**: Failed in HMHOLTZ: PS 3   3.2982E+26   3.0368E+40   7.0000E+00
       2072   1.3076E+03  4.8085E+00 Heat done
       2072    Hmholtz VELX:     38   9.9602E-11   4.9398E+02   1.0000E-10
       2072    Hmholtz VELY:     38   9.3511E-11   4.4755E+02   1.0000E-10
       2072    Hmholtz VELZ:     38   8.0881E-11   4.6601E+02   1.0000E-10
        2072 reorthogo:           0
 2072    7 alpha:  9.1610E-01  4.8479E-02  7.7574E-03  5.1508E-03  1.8164E-03 -4.1065E-04 -4.3921E-04
  2072   7  1.7378E-01  1.1572E-03  1.5018E+02 alph12
      2072 U-PRES gmres:      4  8.4386E-09  1.0000E-08  3.5390E-08  4.9622E-02  3.2245E-01
        2072  DNORM, DIVEX  5.419045247755792E-007  8.438599514879914E-009
       2072   1.3076E+03  2.5401E+00 Fluid done

Thanks,
Saikat

Saikat Mukherjee,
PhD Student,
Paul Research Group - http://www.me.vt.edu/mpaul/
Engineering Science and Mechanics,
Virginia Tech.

On Tue, Dec 5, 2017 at 1:38 PM, Saikat Mukherjee <msaikat6@vt.edu> wrote:
Hello all,

Thanks for the replies, I think my log-file was too big and stuck in approval for the list. But here is the part of the log-file where the problem starts. I have attached the .rea file, the Lewis Number is set in line 133 of the .rea file after parameter 128 (p128).

Thanks,
Saikat




Solving for fluid F T T
       2071    Hmholtz TEMP:      1   1.1353E+00   5.5267E+00   7.0000E+00
       2071    Hmholtz PS 1:     13   5.5318E+00   3.8255E+21   7.0000E+00
  2071   100 **ERROR**: Failed in HMHOLTZ: PS 2   6.5359E+15   3.8255E+21   7.0000E+00
       2071    Hmholtz PS 3:     13   5.5318E+00   3.8255E+21   7.0000E+00
       2071   1.3076E+03  2.0528E+00 Heat done
       2071    Hmholtz VELX:     38   9.8896E-11   4.9469E+02   1.0000E-10
       2071    Hmholtz VELY:     38   9.2808E-11   4.4808E+02   1.0000E-10
       2071    Hmholtz VELZ:     38   8.0264E-11   4.6649E+02   1.0000E-10
        2071 reorthogo:           0
 2071    6 alpha:  9.1687E-01  4.2049E-02  6.7213E-03  2.4412E-03  1.0813E-03  1.7375E-03
  2071   6  1.7386E-01  1.3111E-03  1.3260E+02 alph12
      2071 U-PRES gmres:      5  7.5724E-09  1.0000E-08  4.0064E-08  7.3007E-02  3.7297E-01
        2071  DNORM, DIVEX  5.430060732380546E-007  7.572385434962068E-009
       2071   1.3076E+03  2.4498E+00 Fluid done
  2071 1 flx  1.307563E+03  5.633556E-02  1.121772E+04  1.174017E+04  5.092129E+02
  2071 2 flx  1.307563E+03  5.633556E-02 -1.122518E+04 -1.174681E+04  4.949962E+02
Step   2072, t= 1.3075634E+03, DT= 5.6082644E-05, C=  0.500 6.5792E+03 5.2920E+00
             Solving for heat
 Solving for fluid F T T
       2072    Hmholtz TEMP:      1   1.1351E+00   5.5225E+00   7.0000E+00
  2072   100 **ERROR**: Failed in HMHOLTZ: PS 1   3.2982E+26   3.0368E+40   7.0000E+00
  2072   100 **ERROR**: Failed in HMHOLTZ: PS 2   4.0048E+36   3.0365E+40   7.0000E+00
  2072   100 **ERROR**: Failed in HMHOLTZ: PS 3   3.2982E+26   3.0368E+40   7.0000E+00
       2072   1.3076E+03  4.8085E+00 Heat done
       2072    Hmholtz VELX:     38   9.9602E-11   4.9398E+02   1.0000E-10
       2072    Hmholtz VELY:     38   9.3511E-11   4.4755E+02   1.0000E-10
       2072    Hmholtz VELZ:     38   8.0881E-11   4.6601E+02   1.0000E-10
        2072 reorthogo:           0
 2072    7 alpha:  9.1610E-01  4.8479E-02  7.7574E-03  5.1508E-03  1.8164E-03 -4.1065E-04 -4.3921E-04
  2072   7  1.7378E-01  1.1572E-03  1.5018E+02 alph12
      2072 U-PRES gmres:      4  8.4386E-09  1.0000E-08  3.5390E-08  4.9622E-02  3.2245E-01
        2072  DNORM, DIVEX  5.419045247755792E-007  8.438599514879914E-009
       2072   1.3076E+03  2.5401E+00 Fluid done




















Saikat Mukherjee,
PhD Student,
Paul Research Group - http://www.me.vt.edu/mpaul/
Engineering Science and Mechanics,
Virginia Tech.

On Mon, Dec 4, 2017 at 3:52 PM, Saikat Mukherjee <msaikat6@vt.edu> wrote:
Hey all,

Thanks for the replies. Attached are the log file and the .rea file where I set my Lewis Number. The Lewis Number is set after parameter 128 (p128) at line 133 of the .rea file.

Saikat

Saikat Mukherjee,
PhD Student,
Paul Research Group - http://www.me.vt.edu/mpaul/
Engineering Science and Mechanics,
Virginia Tech.

On Mon, Dec 4, 2017 at 3:15 PM, <nek5000-users@lists.mcs.anl.gov> wrote:
Can you please post your logfile 
Hey Marco,

The error message is "Failed in HMHOLTZ" for the scalar and NaN value is being returned.

Thanks,
Saikat

Saikat Mukherjee,
PhD Student,
Paul Research Group - http://www.me.vt.edu/mpaul/
Engineering Science and Mechanics,
Virginia Tech.

On Mon, Dec 4, 2017 at 2:34 PM, <nek5000-users@lists.mcs.anl.gov> wrote:
Salkat,

could you please be more specific when you write ‘ I have not been successful’? Do you get an error message? 

Marco

On Dec 4, 2017, at 2:31 PM, nek5000-users@lists.mcs.anl.gov wrote:

Hello Neks,

I am solving a Reaction Advection Diffusion equation, where with my non-dimensionalization, the Lewis Number(Le) is the parameter multiplying the Laplacian. That is, Le is the  non-dimensional Diffusion co-efficient of the species. Currently I can do Le = 0.1, but to reduce it further down to 0.01, or 0.001, the spatial resolution has to be increased. I tried doing that increasing the GLL points in SIZE file by increasing the lx1, lxd, but till now I have been unsuccessful.

I am aware there is a special filtering that can be used( Fischer and Mullen, 2001). My question is how to implement that in my .usr file. Is there a routine?

Thanks,
Saikat


Saikat Mukherjee,
PhD Student,
Paul Research Group - http://www.me.vt.edu/mpaul/
Engineering Science and Mechanics,
Virginia Tech.
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