Matt,
Here are matrices (double complex, 3 MB each):
http://dl.dropbox.com/u/60982984/X.dat
http://dl.dropbox.com/u/60982984/Y.dat
Code:
static char help[] = "";
int main(int argc,char **args)
{
Mat A,B;
PetscErrorCode ierr;
PetscViewer viewer;
PetscScalar cone;
PetscInitialize(&argc,&args,(char *)0,help);
ierr =
PetscViewerBinaryOpen(PETSC_COMM_WORLD,"Y.dat",FILE_MODE_READ,&viewer);CHKERRQ(ierr);
ierr = MatCreate(PETSC_COMM_WORLD,&A);CHKERRQ(ierr);
ierr = MatSetFromOptions(A);CHKERRQ(ierr);
ierr = MatLoad(A,viewer);CHKERRQ(ierr);
ierr = PetscViewerDestroy(&viewer);CHKERRQ(ierr);
ierr =
PetscViewerBinaryOpen(PETSC_COMM_WORLD,"X.dat",FILE_MODE_READ,&viewer);CHKERRQ(ierr);
ierr = MatCreate(PETSC_COMM_WORLD,&B);CHKERRQ(ierr);
ierr = MatSetFromOptions(B);CHKERRQ(ierr);
ierr = MatLoad(B,viewer);CHKERRQ(ierr);
ierr = PetscViewerDestroy(&viewer);CHKERRQ(ierr);
cone = 1.0;
ierr = MatAYPX(A,cone,B,DIFFERENT_NONZERO_PATTERN);
ierr = PetscFinalize();
return 0;
}
It works fine if you run it with:
mpirun -n 10 solveTest -mat_type aij
and crashes if n > 10
Thanks.
On 22.04.2012 14:51, Matthew Knepley wrote:
On Sun, Apr 22, 2012 at 8:41
AM, Alexander Grayver <agrayver@gfz-potsdam.de>
wrote:
Sorry, I
don't quite get. Is this something I can avoid
by doing preallocation properly or petsc issue
that will be fixed?
This looks like a PETSc bug to me, but it
would be nice to get input that triggers it.
Thanks,
Matt
On 20.04.2012 14:23, Jed Brown wrote:
On Fri, Apr 20,
2012 at 05:18, Matthew Knepley
<knepley@gmail.com>
wrote:
Did someone intend to fix this,
and then
stop? MatAXPY_BasicWithPreallocation()
is the same as MatAXPY_Basic().
Look how it's called. I don't know
what's going on here.
ierr =
MatAXPYGetPreallocation_SeqAIJ(yy->A,xx->A,nnz_d);CHKERRQ(ierr);
ierr =
MatAXPYGetPreallocation_SeqAIJ(yy->B,xx->B,nnz_o);CHKERRQ(ierr);
ierr =
MatMPIAIJSetPreallocation(B,0,nnz_d,0,nnz_o);CHKERRQ(ierr);
ierr =
MatAXPY_BasicWithPreallocation(B,Y,a,X,str);CHKERRQ(ierr);
--
Regards,
Alexander
--
What most experimenters take for granted before they
begin their experiments is infinitely more
interesting than any results to which their
experiments lead.
-- Norbert Wiener
--
Regards,
Alexander