HDF5-DIAG: Error detected in HDF5 (1.8.18) MPI-process 0:
#000: H5Pdcpl.c line 870 in H5Pset_chunk(): all chunk dimensions must be positive
major: Invalid arguments to routine
minor: Out of range
[0]PETSC ERROR: --------------------- Error Message --------------------------------------------------------------
[0]PETSC ERROR: Error in external library
[0]PETSC ERROR: Error in HDF5 call H5Pset_chunk() Status -1
[0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting.
[0]PETSC ERROR: Petsc Development GIT revision: v3.10.3-1549-g9b78045  GIT Date: 2019-02-13 11:10:12 -0600
[0]PETSC ERROR: plex_prism on a debug_gcc named met-ws-970r17 by Fabian.Jakub Thu Feb 14 14:39:13 2019
[0]PETSC ERROR: Configure options --with-cc=/usr/bin/mpicc --with-fc=/usr/bin/mpif90 --with-cxx=/usr/bin/mpicxx --with-fortran --with-fortran-interfaces --with-shared-libraries=1 --download-hdf5 --download-netcdf=netcdf-c-4.6.2.tar.gz --download-zlib --download-szlib --download-openblas --download-metis --download-parmetis --download-ptscotch --no-download-petsc4py --download-ml --download-hypre --with-debugging=1 COPTFLAGS="-O2 -g" FOPTFLAGS="-O2 -g"
[0]PETSC ERROR: #1 ISView_General_HDF5() line 288 in /software/meteo/xenial/x86_64/petsc/master/src/vec/is/is/impls/general/general.c
[0]PETSC ERROR: #2 ISView_General() line 513 in /software/meteo/xenial/x86_64/petsc/master/src/vec/is/is/impls/general/general.c
[0]PETSC ERROR: #3 ISView() line 1015 in /software/meteo/xenial/x86_64/petsc/master/src/vec/is/is/interface/index.c
[0]PETSC ERROR: #4 DMPlexWriteLabels_HDF5_Static() line 668 in /software/meteo/xenial/x86_64/petsc/master/src/dm/impls/plex/plexhdf5.c
[0]PETSC ERROR: #5 DMPlexView_HDF5_Internal() line 692 in /software/meteo/xenial/x86_64/petsc/master/src/dm/impls/plex/plexhdf5.c
[0]PETSC ERROR: #6 DMView_Plex() line 1103 in /software/meteo/xenial/x86_64/petsc/master/src/dm/impls/plex/plex.c
[0]PETSC ERROR: #7 DMView() line 904 in /software/meteo/xenial/x86_64/petsc/master/src/dm/interface/dm.c
[0]PETSC ERROR: #8 PetscObjectView() line 100 in /software/meteo/xenial/x86_64/petsc/master/src/sys/objects/destroy.c
[0]PETSC ERROR: #9 PetscObjectViewFromOptions() line 136 in /software/meteo/xenial/x86_64/petsc/master/src/sys/objects/destroy.c
[0]PETSC ERROR: #10 User provided function() line 0 in User file


HDF5-DIAG: Error detected in HDF5 (1.8.18) MPI-process 1:
#000: H5Pdcpl.c line 870 in H5Pset_chunk(): all chunk dimensions must be positive
major: Invalid arguments to routine
minor: Out of range
[1]PETSC ERROR: --------------------- Error Message --------------------------------------------------------------
[1]PETSC ERROR: Error in external library
[1]PETSC ERROR: Error in HDF5 call H5Pset_chunk() Status -1
[1]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting.
[1]PETSC ERROR: Petsc Development GIT revision: v3.10.3-1549-g9b78045  GIT Date: 2019-02-13 11:10:12 -0600
[1]PETSC ERROR: plex_prism on a debug_gcc named met-ws-970r17 by Fabian.Jakub Thu Feb 14 14:39:13 2019
[1]PETSC ERROR: Configure options --with-cc=/usr/bin/mpicc --with-fc=/usr/bin/mpif90 --with-cxx=/usr/bin/mpicxx --with-fortran --with-fortran-interfaces --with-shared-libraries=1 --download-hdf5 --download-netcdf=netcdf-c-4.6.2.tar.gz --download-zlib --download-szlib --download-openblas --download-metis --download-parmetis --download-ptscotch --no-download-petsc4py --download-ml --download-hypre --with-debugging=1 COPTFLAGS="-O2 -g" FOPTFLAGS="-O2 -g"
[1]PETSC ERROR: #1 ISView_General_HDF5() line 288 in /software/meteo/xenial/x86_64/petsc/master/src/vec/is/is/impls/general/general.c
[1]PETSC ERROR: #2 ISView_General() line 513 in /software/meteo/xenial/x86_64/petsc/master/src/vec/is/is/impls/general/general.c
[1]PETSC ERROR: #3 ISView() line 1015 in /software/meteo/xenial/x86_64/petsc/master/src/vec/is/is/interface/index.c
[1]PETSC ERROR: #4 DMPlexWriteLabels_HDF5_Static() line 668 in /software/meteo/xenial/x86_64/petsc/master/src/dm/impls/plex/plexhdf5.c
[1]PETSC ERROR: #5 DMPlexView_HDF5_Internal() line 692 in /software/meteo/xenial/x86_64/petsc/master/src/dm/impls/plex/plexhdf5.c
[1]PETSC ERROR: #6 DMView_Plex() line 1103 in /software/meteo/xenial/x86_64/petsc/master/src/dm/impls/plex/plex.c
[1]PETSC ERROR: #7 DMView() line 904 in /software/meteo/xenial/x86_64/petsc/master/src/dm/interface/dm.c
[1]PETSC ERROR: #8 PetscObjectView() line 100 in /software/meteo/xenial/x86_64/petsc/master/src/sys/objects/destroy.c
[1]PETSC ERROR: #9 PetscObjectViewFromOptions() line 136 in /software/meteo/xenial/x86_64/petsc/master/src/sys/objects/destroy.c
[1]PETSC ERROR: #10 User provided function() line 0 in User file
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