Any change sites might strip out "dangerous" shell scripts I reproduced the same problem several times with different versions of OpenMPI on the UTK xSDK machine.

On Jan 3, 2021, at 9:36 AM, Jed Brown <[email protected]> wrote:

I don't understand.

$ wget https://download.open-mpi.org/release/open-mpi/v4.1/openmpi-4.1.0.tar.bz2 --2021-01-03 08:35:08-- https://download.open-mpi.org/release/open-mpi/v4.1/openmpi-4.1.0.tar.bz2 Resolving download.open-mpi.org (download.open-mpi.org)... 143.204.26.61, 143.204.26.76, 143.204.26.58, ... Connecting to download.open-mpi.org (download.open-mpi.org)|143.204.26.61|:443... connected. HTTP request sent, awaiting response... 200 OK Length: 10022171 (9.6M) [binary/octet-stream] Saving to: ‘openmpi-4.1.0.tar.bz2’

openmpi-4.1.0.tar.bz2 100%[==================================>] 9.56M 46.6MB/s in 0.2s

2021-01-03 08:35:08 (46.6 MB/s) - ‘openmpi-4.1.0.tar.bz2’ saved [10022171/10022171]

$ tar xf openmpi-4.1.0.tar.bz2 $ file openmpi-4.1.0/configure openmpi-4.1.0/configure: POSIX shell script, ASCII text executable, with very long lines

Barry Smith <[email protected]> writes:

...

4.1 is also missing ./configure but documentation clearly states you install openMPI with ./configure !

...

On Jan 3, 2021, at 8:31 AM, Barry Smith <[email protected]> wrote:

$ wget https://download.open-mpi.org/release/open-mpi/v4.0/openmpi-4.0.3.tar.gz <https://download.open-mpi.org/release/open-mpi/v4.0/openmpi-4.0.3.tar.gz> --2021-01-03 09:24:24-- https://download.open-mpi.org/release/open-mpi/v4.0/openmpi-4.0.3.tar.gz <https://download.open-mpi.org/release/open-mpi/v4.0/openmpi-4.0.3.tar.gz> Resolving download.open-mpi.org <http://download.open-mpi.org/> (download.open-mpi.org <http://download.open-mpi.org/>)... 13.249.117.107, 13.249.117.91, 13.249.117.41, ... Connecting to download.open-mpi.org <http://download.open-mpi.org/> (download.open-mpi.org <http://download.open-mpi.org/>)|13.249.117.107|:443... connected. HTTP request sent, awaiting response... 200 OK Length: 17418534 (17M) [binary/octet-stream] Saving to: ‘openmpi-4.0.3.tar.gz’

100%[=======================================================================>] 17,418,534 49.1MB/s in 0.3s

2021-01-03 09:24:26 (49.1 MB/s) - ‘openmpi-4.0.3.tar.gz’ saved [17418534/17418534]

~ arch-fix-cuda-ccbin-wrong-arguments $ cd petsc ~/petsc (barry/2020-12-31/fix-cuda-ccbin-wrong-arguments>) arch-fix-cuda-ccbin-wrong-arguments $ ./configure --download-openmpi=../openmpi-4.0.3.tar.gz --with-cc=gcc --with-cxx=g++ --with-fc=gfortran --with-cuda --download-slepc =============================================================================== Configuring PETSc to compile on your system =============================================================================== ============================================================================================= ***** WARNING: F77 (set to /nfs/apps/spacks/2020-10-22/opt/spack/linux-centos7-x86_64/gcc-7.3.0/gcc-7.3.0-l use ./configure F77=$F77 if you really want to use that value ****** ============================================================================================= ============================================================================================= ***** WARNING: You have a version of GNU make older than 4.0. It will work, but may not support all the parallel testing options. You can install the latest GNU make with your package manager, such as brew or macports, or use the --download-make option to get the latest GNU make ***** ============================================================================================= ============================================================================================= It appears you do not have valgrind installed on your system. We HIGHLY recommend you install it from www.valgrind.org <http://www.valgrind.org/> Or install valgrind-devel or equivalent using your package manager. Then rerun ./configure ============================================================================================= ============================================================================================= Running libtoolize on OPENMPI; this may take several minutes ============================================================================================= ============================================================================================= Running autoreconf on OPENMPI; this may take several minutes ============================================================================================= ******************************************************************************* UNABLE to CONFIGURE with GIVEN OPTIONS (see configure.log for details): ------------------------------------------------------------------------------- Error running libtoolize or autoreconf on OPENMPI: Could not execute "[['/usr/bin/autoreconf', '--force', '--install']]": autoreconf: 'configure.ac' or 'configure.in' is required *******************************************************************************