On Fri, Mar 19, 2021 at 11:52 AM Lawrence Mitchell <[email protected]> wrote:

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On 19 Mar 2021, at 15:20, Jed Brown <[email protected]> wrote:

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I guess the only issue is now one needs to always remember to traverse cells in the reordered_cells order (although if you call DMPlexPermute that is automatic?).

Can DMPlexPermute handle a non-stratified permutation?

I think the answer here is still no (as per your previous statement). The way we work around this in Firedrake is as I described above. Effectively we always traverse the cells in order specified by the RCM reordering. For traversal of facets and other entities we then build a traversal order once by traversing the cells and greedily ordering the facets/edges/etc...

I think you could get this behaviour from dmplexpermute if one wrote it so that it permutes the cells with RCM and then compatibly permutes lower-dimensional entities. This would maintain stratification, but I think keep good cache locality for all entity traversals. But I do not understand the details of what dmplexpermute is doing at the moment.

I thought Plex already did that. Maybe I am wrong, it was a long time ago. Matt

Cheers,

Lawrence

-- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener https://www.cse.buffalo.edu/~knepley/ <http://www.cse.buffalo.edu/~knepley/>