https://petsc.org/release/faq/#what-does-the-message-hwloc-linux-ignoring-pci-device-with-non-16bit-domain-mean
Ah. Obscure environment variables, not present in the error message, are always the best way to deal with this. Stay classy, hwloc!
Matt
> On Oct 10, 2022, at 11:54 PM, Sijie Zhang <zhan2355@purdue.edu> wrote:
>
> Hi,
>
> When I try to install petsc on my PC and run the make all check commend it has the following error. Can you help me to troubleshoot that?
>
> Thanks.
>
> Sijie
>
> ++++++++++++++++++++++++++++++++++++++++++++++++
> Running check examples to verify correct installation
> Using PETSC_DIR=/home/zhangsijie1995/Documents/Packages/petsc-3.18.0 and PETSC_ARCH=arch-linux-c-debug
> Possible error running C/C++ src/snes/tutorials/ex19 with 1 MPI process
> See https://petsc.org/release/faq/
> hwloc/linux: Ignoring PCI device with non-16bit domain.
> Pass --enable-32bits-pci-domain to configure to support such devices
> (warning: it would break the library ABI, don't enable unless really needed).
> lid velocity = 0.0016, prandtl # = 1., grashof # = 1.
> Number of SNES iterations = 2
> Possible error running C/C++ src/snes/tutorials/ex19 with 2 MPI processes
> See https://petsc.org/release/faq/
> hwloc/linux: Ignoring PCI device with non-16bit domain.
> Pass --enable-32bits-pci-domain to configure to support such devices
> (warning: it would break the library ABI, don't enable unless really needed).
> hwloc/linux: Ignoring PCI device with non-16bit domain.
> Pass --enable-32bits-pci-domain to configure to support such devices
> (warning: it would break the library ABI, don't enable unless really needed).
> lid velocity = 0.0016, prandtl # = 1., grashof # = 1.
> Number of SNES iterations = 2
> Possible error running Fortran example src/snes/tutorials/ex5f with 1 MPI process
> See https://petsc.org/release/faq/
> hwloc/linux: Ignoring PCI device with non-16bit domain.
> Pass --enable-32bits-pci-domain to configure to support such devices
> (warning: it would break the library ABI, don't enable unless really needed).
> Number of SNES iterations = 3
> Completed test examples
> Error while running make check
> gmake[1]: *** [makefile:149: check] Error 1
> make: *** [GNUmakefile:17: check] Error 2
> ++++++++++++++++++++++++++++++++++++++++++++++++
> <configure.log><make.log>