On 10/31/2016 11:47 PM, Luke Van Roekel wrote:
Hello,
I've been trying to compile and run a very simple mpi test on our cluster with intel-mpi and openmpi. The test program is below. When I run with openmpi everything is fine. When I run with intel-mpi, I receive the following error
This requires fcntl(2) to be implemented. As of 8/25/2011 it is not. Generic MPICH Message: File locking failed in ADIOI_Set_lock(fd 6,cmd F_SETLKW/7,type F_WRLCK/1,whence 0) with return value FFFFFFFF and errno 26.
- If the file system is NFS, you need to use NFS version 3, ensure that the lockd daemon is running on all the machines, and mount the directory with the 'noac' option (no attribute caching).
- If the file system is LUSTRE, ensure that the directory is mounted with the 'flock' option.
ADIOI_Set_lock:: Function not implemented
ADIOI_Set_lock:offset 0, length 4
your site administrator needs to enable fcntl locking with the 'flock' mount option . You can try disabling data sieving: you would create an MPI_Info object and add the key "romio_ds_write" with the value "disable" ==rob
Any thoughts on how to proceed? The size/format of the file read in seems to make no difference.
Regards, Luke
#include <stdio.h>
#include <stdlib.h>
#include <mpi.h>
int main(int argc, char **argv) {
int buf, err;
MPI_File fh;
MPI_Status status;
MPI_Init(&argc, &argv);
if (argc != 2) {
printf("Usage: %s filename\n", argv[0]);
MPI_Finalize();
return 1;
}
err = MPI_File_open(MPI_COMM_WORLD, argv[1], MPI_MODE_CREATE |
MPI_MODE_RDWR, MPI_INFO_NULL, &fh);
if (err != MPI_SUCCESS) printf("Error: MPI_File_open()\n");
err = MPI_File_write_all(fh, &buf, 1, MPI_INT, &status);
if (err != MPI_SUCCESS) printf("Error: MPI_File_write_all()\n");
MPI_File_close(&fh);
MPI_Finalize();
return 0;
}
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