February 2012 - moab-dev - mailman3.cels.anl.gov

Problem with src/parallel/Makefile.am
by Roman Putanowicz 05 Feb '12

05 Feb '12

Hi, There is a problem with src/parallel/Makefile.am (MOAB revision 5377): The file moab/gs.hpp is specified twice in MOAB_PARALLEL_HDRS which chokes /usr/bin/install Regards, Roman -- Roman Putanowicz, PhD < putanowr(a)l5.pk.edu.pl > Institute for Computational Civil Engng (L-5) Dept. of Civil Engng, Cracow Univ. of Technology www.l5.pk.edu.pl, tel. +48 12 628 2569, fax 2034

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r5378 - MOAB/trunk/src/parallel
by iulian＠mcs.anl.gov 05 Feb '12

05 Feb '12

Author: iulian Date: 2012-02-05 22:29:21 -0600 (Sun, 05 Feb 2012) New Revision: 5378 Modified: MOAB/trunk/src/parallel/Makefile.am Log: duplicate entry, make install failed Thanks, Roman Modified: MOAB/trunk/src/parallel/Makefile.am =================================================================== --- MOAB/trunk/src/parallel/Makefile.am 2012-02-03 17:30:54 UTC (rev 5377) +++ MOAB/trunk/src/parallel/Makefile.am 2012-02-06 04:29:21 UTC (rev 5378) @@ -48,7 +48,6 @@ moab/ProcConfig.hpp \ moab/ParallelData.hpp \ MBParallelConventions.h \ - moab/gs.hpp \ moab/TupleList.hpp if PARALLEL_HDF5

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r5375 - MOAB/trunk/tools/mbcoupler
by jvporter＠wisc.edu 02 Feb '12

02 Feb '12

Author: jvporter Date: 2012-02-02 17:44:10 -0600 (Thu, 02 Feb 2012) New Revision: 5375 Modified: MOAB/trunk/tools/mbcoupler/Makefile.am Log: Fix makefile Modified: MOAB/trunk/tools/mbcoupler/Makefile.am =================================================================== --- MOAB/trunk/tools/mbcoupler/Makefile.am 2012-02-02 21:24:56 UTC (rev 5374) +++ MOAB/trunk/tools/mbcoupler/Makefile.am 2012-02-02 23:44:10 UTC (rev 5375) @@ -18,7 +18,7 @@ poly.h \ tensor.c \ tensor.h \ - errmem.cpp \ + errmem.c \ errmem.h \ extrafindpt.h \ findpt.c \

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r5374 - MOAB/trunk/doc
by tautges＠mcs.anl.gov 02 Feb '12

02 Feb '12

Author: tautges Date: 2012-02-02 15:24:56 -0600 (Thu, 02 Feb 2012) New Revision: 5374 Modified: MOAB/trunk/doc/metadata_info.doc MOAB/trunk/doc/metadata_info.pdf Log: Added structured mesh info. Modified: MOAB/trunk/doc/metadata_info.doc =================================================================== (Binary files differ) Modified: MOAB/trunk/doc/metadata_info.pdf =================================================================== (Binary files differ)

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r5373 - MOAB/trunk/itaps/imesh
by tautges＠mcs.anl.gov 02 Feb '12

02 Feb '12

Author: tautges Date: 2012-02-02 14:59:27 -0600 (Thu, 02 Feb 2012) New Revision: 5373 Modified: MOAB/trunk/itaps/imesh/iMesh_extensions.h Log: Clarifying ordering of ijk in local_dims and global_dims. Modified: MOAB/trunk/itaps/imesh/iMesh_extensions.h =================================================================== --- MOAB/trunk/itaps/imesh/iMesh_extensions.h 2012-02-02 20:57:24 UTC (rev 5372) +++ MOAB/trunk/itaps/imesh/iMesh_extensions.h 2012-02-02 20:59:27 UTC (rev 5373) @@ -270,9 +270,11 @@ iMesh_Instance instance, /**< [in] iMesh instance handle */ int *local_dims, - /**< [in] Min/max corners of local ijk parameters, -1 for unused dimensions */ + /**< [in] Min/max corners of local ijk parameters, -1 for unused dimensions; specified as + ilo, jlo, klo, ihi, jhi, khi. */ int *global_dims, - /**< [in] Min/max corners of global ijk parameters, -1 for unused dimensions; NULL if running in serial. */ + /**< [in] Min/max corners of global ijk parameters, -1 for unused dimensions; NULL if running in serial. + Order similar to local_dims. */ double *i_vals, /**< [in] Physical positions of i values, NULL if not placed in physical space. */ double *j_vals,

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r5372 - MOAB/trunk/itaps/imesh
by tautges＠mcs.anl.gov 02 Feb '12

02 Feb '12

Author: tautges Date: 2012-02-02 14:57:24 -0600 (Thu, 02 Feb 2012) New Revision: 5372 Modified: MOAB/trunk/itaps/imesh/iMesh_MOAB.cpp Log: Fix reference through possibly-NULL pointer. Modified: MOAB/trunk/itaps/imesh/iMesh_MOAB.cpp =================================================================== --- MOAB/trunk/itaps/imesh/iMesh_MOAB.cpp 2012-02-02 19:39:35 UTC (rev 5371) +++ MOAB/trunk/itaps/imesh/iMesh_MOAB.cpp 2012-02-02 20:57:24 UTC (rev 5372) @@ -3217,7 +3217,7 @@ CHKERR(rval, "Trouble creating scd vertex sequence."); // set the global box parameters - scd_box->set_global_box_dims(global_dims); + if (global_dims) scd_box->set_global_box_dims(global_dims); tmp_range.insert(scd_box->start_vertex(), scd_box->start_vertex()+scd_box->num_vertices()-1); tmp_range.insert(scd_box->start_element(), scd_box->start_element()+scd_box->num_elements()-1);

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buildbot failure in moab-distcheck: failed compile
by moab-dev＠mcs.anl.gov 02 Feb '12

02 Feb '12

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r5369 - in MOAB/trunk: examples src/parallel src/parallel/moab
by tautges＠mcs.anl.gov 02 Feb '12

02 Feb '12

Author: tautges Date: 2012-02-02 10:03:00 -0600 (Thu, 02 Feb 2012) New Revision: 5369 Modified: MOAB/trunk/examples/Makefile.am MOAB/trunk/examples/SetsNTags.cpp MOAB/trunk/src/parallel/Makefile.am MOAB/trunk/src/parallel/TupleList.cpp MOAB/trunk/src/parallel/moab/TupleList.hpp Log: Few changes to TupleList stuff to make auto tests work. Also a misc change to SetsNTags for parallel running. make check all works. Modified: MOAB/trunk/examples/Makefile.am =================================================================== --- MOAB/trunk/examples/Makefile.am 2012-02-01 19:25:59 UTC (rev 5368) +++ MOAB/trunk/examples/Makefile.am 2012-02-02 16:03:00 UTC (rev 5369) @@ -16,6 +16,7 @@ LDADD = ../src/libMOAB.la AM_CPPFLAGS += -I../src \ -I$(srcdir)/../src \ + -I$(srcdir)/../src/parallel \ -I$(srcdir)/../src/oldinc FileRead_SOURCES = FileRead.cpp Modified: MOAB/trunk/examples/SetsNTags.cpp =================================================================== --- MOAB/trunk/examples/SetsNTags.cpp 2012-02-01 19:25:59 UTC (rev 5368) +++ MOAB/trunk/examples/SetsNTags.cpp 2012-02-02 16:03:00 UTC (rev 5369) @@ -1,6 +1,11 @@ #include "moab/Core.hpp" #include "moab/Interface.hpp" #include "moab/Range.hpp" + +#ifdef USE_MPI +#include "moab_mpi.h" +#endif + #include <iostream> int main(int argc, char **argv) { @@ -20,7 +25,7 @@ std::cout << "Usage: " << argv[0] << "[-p] <filename>" << std::endl; return 0; } - + if (parallel) rval = mb->load_file(argv[argc-1], 0, par_opt); else @@ -68,5 +73,15 @@ rval = mb->list_entities(sets); if (moab::MB_SUCCESS != rval) return 1; + rval = mb->list_entities(NULL, 1); + +#ifdef USE_MPI + if (parallel) { + MPI_Barrier(MPI_COMM_WORLD); + std::cout << std::flush; + std::cerr << std::flush; + } +#endif

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buildbot failure in moab-distcheck: failed compile
by moab-dev＠mcs.anl.gov 02 Feb '12

02 Feb '12

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r5368 - MOAB/trunk/doc
by xbxu＠mcs.anl.gov 01 Feb '12

01 Feb '12

Author: xbxu Date: 2012-02-01 13:25:59 -0600 (Wed, 01 Feb 2012) New Revision: 5368 Modified: MOAB/trunk/doc/metadata_info.doc Log: update the doc to include specification of global and variables attributes tags Modified: MOAB/trunk/doc/metadata_info.doc =================================================================== (Binary files differ)

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