Re: [petsc-dev] Cannot locate file: share/petsc/datafiles/matrices/small
Okay. I will try to set correctly the DATAFILESPATH options. I see even this error: not ok vec_is_sf_tutorials-ex1_4+sf_window_sync-fence_sf_window_flavor-create # Error code: 68 # PetscSF Object: 4 MPI processes # type: window # [0] Number of roots=3, leaves=2, remote ranks=2 # [0] 0 <- (3,1) # [0] 1 <- (1,0) # [1] Number of roots=2, leaves=3, remote ranks=2 # [1] 0 <- (0,1) # [1] 1 <- (2,0) # [1] 2 <- (0,2) # [2] Number of roots=2, leaves=3, remote ranks=3 # [2] 0 <- (1,1) # [2] 1 <- (3,0) # [2] 2 <- (0,2) # [3] Number of roots=2, leaves=3, remote ranks=2 # [3] 0 <- (2,1) # [3] 1 <- (0,0) # [3] 2 <- (0,2) # [0] Roots referenced by my leaves, by rank # [0] 1: 1 edges # [0] 1 <- 0 # [0] 3: 1 edges # [0] 0 <- 1 # [1] Roots referenced by my leaves, by rank # [1] 0: 2 edges # [1] 0 <- 1 # [1] 2 <- 2 # [1] 2: 1 edges # [1] 1 <- 0 # [2] Roots referenced by my leaves, by rank # [2] 0: 1 edges # [2] 2 <- 2 # [2] 1: 1 edges # [2] 0 <- 1 # [2] 3: 1 edges # [2] 1 <- 0 # [3] Roots referenced by my leaves, by rank # [3] 0: 2 edges # [3] 1 <- 0 # [3] 2 <- 2 # [3] 2: 1 edges # [3] 0 <- 1 # current flavor=CREATE synchronization=FENCE MultiSF sort=rank-order # current info=MPI_INFO_NULL # [buildhw-x86-09:1135574] *** An error occurred in MPI_Accumulate # [buildhw-x86-09:1135574] *** reported by process [3562602497,3] # [buildhw-x86-09:1135574] *** on win rdma window 4 # [buildhw-x86-09:1135574] *** MPI_ERR_RMA_RANGE: invalid RMA address range # [buildhw-x86-09:1135574] *** MPI_ERRORS_ARE_FATAL (processes in this win will now abort, # [buildhw-x86-09:1135574] *** and potentially your MPI job) # [buildhw-x86-09.iad2.fedoraproject.org:1135567] 3 more processes have sent help message help-mpi-errors.txt / mpi_errors_are_fatal # [buildhw-x86-09.iad2.fedoraproject.org:1135567] Set MCA parameter "orte_base_help_aggregate" to 0 to see all help / error messages Looks like an error related to OpenMPI-4*: https://github.com/open-mpi/ompi/issues/6374 Thank you. On 9/12/21 18:09, Pierre Jolivet wrote:
Hello, Did you copy the files from https://gitlab.com/petsc/datafiles <https://gitlab.com/petsc/datafiles> before the make check? cfd.1.10 is not part of https://gitlab.com/petsc/petsc <https://gitlab.com/petsc/petsc>, so you either need to copy the files from the datafiles repository, or remove the --DATAFILESPATH=/home/sagitter/rpmbuild/BUILD/petsc-3.15.4/petsc-3.15.4/share/petsc/datafiles configure option.
Thanks, Pierre
On 12 Sep 2021, at 6:02 PM, Antonio T. sagitter <[email protected] <mailto:[email protected]>> wrote:
Hi all.
This error is repeated when the tests are compiled in PETSc-3.15.4 compilation: https://paste.in/MhdNjf <https://paste.in/MhdNjf>
This happens in Fedora 34 x86_64 with gcc-11.2.1
make.log and configure.log are attached -- --- Antonio Trande Fedora Project mailto: [email protected] GPG key: 0x29FBC85D7A51CC2F GPG key server: https://keyserver1.pgp.com/ <make_configure.zip><OpenPGP_0x29FBC85D7A51CC2F.asc>
-- --- Antonio Trande Fedora Project mailto: [email protected] GPG key: 0x29FBC85D7A51CC2F GPG key server: https://keyserver1.pgp.com/
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Antonio T. sagitter