Hello again, The analysis is running very slow is their a reason for it? Also, one states completed in analysis but looks stuck? Whats up with that? YOUR #1 FAN Rick On Thu, Jun 23, 2011 at 10:30 AM, <[email protected]> wrote:
Thanks buddy! Sent from my “contract free” BlackBerry® smartphone on the WIND network.
-----Original Message----- From: Mark D'Souza <[email protected]> Date: Thu, 23 Jun 2011 12:10:11 To: Rick White<[email protected]> Cc: <[email protected]> Subject: Re: [mg-rast] MGRAST - account request approved
Hi Rick,
Sorry about that, I reset the upload and it should work fine now.
Regards, Mark D'Souza -- for the MG-RAST team
[email protected] http://metagenomics.anl.gov/
If you need to respond to this email please address it to the mailing-list [email protected]
On Jun 22, 2011, at 11:49 PM, Rick White wrote:
Hello again, I cant upload any more files...
uploaded a RMStromCCMexMic20050722.fa.gz file and its stuck...
I can't upload any more?
Please help!
Thanks rick
On Tue, Jun 21, 2011 at 2:16 PM, Mark D'Souza <[email protected]> wrote: Hi,
Give us the metagenome IDs and queries the next time you get an undefined tree, we will check into it. We have seen this happen before, querying the database for huge amounts of data is the problem and we are working on fixing this.
What are the parameters you are using for the sequence trimming?
Regards, Mark
On Jun 21, 2011, at 11:50 AM, Rick White wrote:
I have noticed a bug with the tree output it keeps stating undefined? Is this a bug or something else?
Yes, I will let you know the asap the renaming & deletion.
Also, when I put in my amplicons & use the trimmer it takes the mean 400 bp down to 205 bp. It would be great to reject reads that are shorter then the length you want them.
ONCE AGAIN, I AM A HUGE FAN OF THE SITE! I plan on using from now on.
Keep up the great work! Rick
On Tue, Jun 21, 2011 at 9:32 AM, Mark D'Souza <[email protected]> wrote: Hi, and thanks for the compliment,
The deletion/renaming is something we are working on, if you let me know the MG-RAST IDs and changes to be made I can take care of it.
Regards, Mark D'Souza -- for the MG-RAST team
[email protected] http://metagenomics.anl.gov/
If you need to respond to this email please address it to the mailing-list [email protected]
On Jun 20, 2011, at 5:49 PM, Rick White wrote:
Mark, MG-RAST, is the greatest thing ever!!!!!!!!!
It has saved me so much TIME! I wished I would have known about it sooner.
Quick question, how do I delete ones that completed analysis but I labeled wrong?
Or how can I edit them? Just rename them it sends me a wierd error message. I would like to input pH etc or rename them!
Thanks Rick
On Thu, Jun 9, 2011 at 11:59 AM, Mark D'Souza <[email protected]> wrote: Hi,
Can you tell us what you see when you login and the browser you are using? You will need to set the preferences for your browser to accept cookies (required for login) and we test on FireFox. The URL in the notification email you received (http://metagenomics.anl.gov/) points to the V3.1 site.
Regards, Mark D'Souza -- for the MG-RAST team
[email protected] http://metagenomics.anl.gov/
If you need to respond to this email please address it to the mailing-list [email protected]
On Jun 9, 2011, at 12:46 PM, Rick White wrote:
Is verison 3 avaliable?
I can't login or upload my data on using ubuntu??
On Thu, Jun 9, 2011 at 10:27 AM, <[email protected]> wrote: Dear RIck White,
your account request for access to our web service MGRAST has been accepted.
Your login is: raw937 Your password is: v307SsCD
We recommend to change the password immediately. To do so please go to our web service http://metagenomics.anl.gov/ and change your password from the account management.
--
This email was automatically generated by the MGRAST web service. Do not reply.
-- Richard Allen White III M.S. PhD Student - Suttle Lab Department of Microbiology & Immunology The University of British Columbia Vancouver, BC, Canada V6T 1Z4 ph.(604) 827-5715 cell. ***My new number is 604-440-5150*** http://www.ocgy.ubc.ca/~suttle/
For Shipping: Richard Allen White III & Amy Chan Suttle Lab UBC-Botany/zoology/micro 1316-6270 University Blvd. Vancouver, BC V6T 1Z4 1.604.827.5715
-- Richard Allen White III M.S. PhD Student - Suttle Lab Department of Microbiology & Immunology The University of British Columbia Vancouver, BC, Canada V6T 1Z4 ph.(604) 827-5715 cell. ***My new number is 604-440-5150*** http://www.ocgy.ubc.ca/~suttle/
For Shipping: Richard Allen White III & Amy Chan Suttle Lab UBC-Botany/zoology/micro 1316-6270 University Blvd. Vancouver, BC V6T 1Z4 1.604.827.5715
-- Richard Allen White III M.S. PhD Student - Suttle Lab Department of Microbiology & Immunology The University of British Columbia Vancouver, BC, Canada V6T 1Z4 ph.(604) 827-5715 cell. ***My new number is 604-440-5150*** http://www.ocgy.ubc.ca/~suttle/
For Shipping: Richard Allen White III & Amy Chan Suttle Lab UBC-Botany/zoology/micro 1316-6270 University Blvd. Vancouver, BC V6T 1Z4 1.604.827.5715
-- Richard Allen White III M.S. PhD Student - Suttle Lab Department of Microbiology & Immunology The University of British Columbia Vancouver, BC, Canada V6T 1Z4 ph.(604) 827-5715 cell. ***My new number is 604-440-5150*** http://www.ocgy.ubc.ca/~suttle/
For Shipping: Richard Allen White III & Amy Chan Suttle Lab UBC-Botany/zoology/micro 1316-6270 University Blvd. Vancouver, BC V6T 1Z4 1.604.827.5715
-- Richard Allen White III M.S. PhD Student - Suttle Lab Department of Microbiology & Immunology The University of British Columbia Vancouver, BC, Canada V6T 1Z4 ph.(604) 827-5715 cell. ***My new number is 604-440-5150*** http://www.ocgy.ubc.ca/~suttle/ For Shipping: Richard Allen White III & Amy Chan Suttle Lab UBC-Botany/zoology/micro 1316-6270 University Blvd. Vancouver, BC V6T 1Z4 1.604.827.5715