October 2012 - swift-bugs - mailman3.cels.anl.gov

[Bug 851] New: Failed to convert .xml to .kml
by bugzilla-daemon＠mcs.anl.gov 15 Oct '12

15 Oct '12

https://bugzilla.mcs.anl.gov/swift/show_bug.cgi?id=851 Summary: Failed to convert .xml to .kml Product: Swift Version: trunk Platform: PC OS/Version: Mac OS Status: NEW Severity: normal Priority: P2 Component: General AssignedTo: hategan(a)mcs.anl.gov ReportedBy: davidk(a)ci.uchicago.edu When trying to run the DSSAT scripts with the trunk, I see the following error: Could not start execution: Failed to convert .xml to .kml for RunDSSAT.swift: org.antlr.stringtemplate.StringTemplate cannot be cast to java.util.List I tried also with just a simple hello world swift script and saw a similar error below: [davidk@communicado ~]$ swift hi.swift no sites file specified, setting to default: /home/davidk/swift-trunk/cog/modules/swift/dist/swift-svn/etc/sites.xml Could not start execution: Failed to convert .xml to .kml for hi.swift: null -- Configure bugmail: https://bugzilla.mcs.anl.gov/swift/userprefs.cgi?tab=email ------- You are receiving this mail because: ------- You are watching all bug changes.

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[Bug 847] New: Document how to set Swift Java heap sizes and how to manage memory
by bugzilla-daemon＠mcs.anl.gov 08 Oct '12

08 Oct '12

https://bugzilla.mcs.anl.gov/swift/show_bug.cgi?id=847 Summary: Document how to set Swift Java heap sizes and how to manage memory Product: Swift Version: trunk Platform: PC OS/Version: Mac OS Status: ASSIGNED Severity: normal Priority: P2 Component: Documentation AssignedTo: hategan(a)mcs.anl.gov ReportedBy: wilde(a)mcs.anl.gov also doc foreach.max.threads with this, in a new User Guide section on "managing and Estimating memory needs". -- Configure bugmail: https://bugzilla.mcs.anl.gov/swift/userprefs.cgi?tab=email ------- You are receiving this mail because: ------- You are watching all bug changes.

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[Bug 845] New: Add Release and Guide navigation to Swift html docs
by bugzilla-daemon＠mcs.anl.gov 08 Oct '12

08 Oct '12

https://bugzilla.mcs.anl.gov/swift/show_bug.cgi?id=845 Summary: Add Release and Guide navigation to Swift html docs Product: Swift Version: trunk Platform: PC OS/Version: Mac OS Status: ASSIGNED Severity: normal Priority: P2 Component: Documentation AssignedTo: davidk(a)ci.uchicago.edu ReportedBy: wilde(a)mcs.anl.gov We should have links (eg at top and bottom) of Swift docs back to: - other releases - other guides - main site Each doc should make clear what doc and release you are reading. Maybe work with Vytas or ask Google for a format that can do this nicely with asciidoc. -- Configure bugmail: https://bugzilla.mcs.anl.gov/swift/userprefs.cgi?tab=email ------- You are receiving this mail because: ------- You are watching all bug changes.

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[Bug 843] New: Map old web pages to their new location to match Google search
by bugzilla-daemon＠mcs.anl.gov 08 Oct '12

08 Oct '12

https://bugzilla.mcs.anl.gov/swift/show_bug.cgi?id=843 Summary: Map old web pages to their new location to match Google search Product: Swift Version: trunk Platform: PC OS/Version: Mac OS Status: ASSIGNED Severity: normal Priority: P2 Component: Documentation AssignedTo: davidk(a)ci.uchicago.edu ReportedBy: wilde(a)mcs.anl.gov Googling for "Swift User Guide" gives: http://www.ci.uchicago.edu/swift/guides/userguide.php which is located in the old Swift web site (and has old format). Replace these pages with a link to the latest guide. -- Configure bugmail: https://bugzilla.mcs.anl.gov/swift/userprefs.cgi?tab=email ------- You are receiving this mail because: ------- You are watching all bug changes.

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[Bug 841] New: Coaster deadlock with DSSAT
by bugzilla-daemon＠mcs.anl.gov 05 Oct '12

05 Oct '12

https://bugzilla.mcs.anl.gov/swift/show_bug.cgi?id=841 Summary: Coaster deadlock with DSSAT Product: Swift Version: trunk Platform: PC OS/Version: Mac OS Status: NEW Severity: normal Priority: P2 Component: General AssignedTo: hategan(a)mcs.anl.gov ReportedBy: davidk(a)ci.uchicago.edu There seems to be a coaster related deadlock in the latest version of trunk that is affecting DSSAT runs. Here is the relevant jstack output. Found one Java-level deadlock: ============================= "PullThread": waiting to lock monitor 0x0000000045f85a50 (object 0x00000007fa51e898, a java.util.ArrayList), which is held by "Block Queue Processor" "Block Queue Processor": waiting to lock monitor 0x0000000045d2e1e8 (object 0x00000007fa51a220, a org.globus.cog.abstraction.coaster.service.job.manager.Cpu), which is held by "PullThread" Java stack information for the threads listed above: =================================================== "PullThread": at org.globus.cog.abstraction.coaster.service.job.manager.Block.add(Block.java:188) - waiting to lock <0x00000007fa51e898> (a java.util.ArrayList) at org.globus.cog.abstraction.coaster.service.job.manager.Cpu.launchSequential(Cpu.java:219) at org.globus.cog.abstraction.coaster.service.job.manager.Cpu.launch(Cpu.java:206) at org.globus.cog.abstraction.coaster.service.job.manager.Cpu.pull(Cpu.java:181) - locked <0x00000007fa51a220> (a org.globus.cog.abstraction.coaster.service.job.manager.Cpu) at org.globus.cog.abstraction.coaster.service.job.manager.PullThread.run(PullThread.java:131) "Block Queue Processor": at org.globus.cog.abstraction.coaster.service.job.manager.Cpu.getTimeLast(Cpu.java:308) - waiting to lock <0x00000007fa51a220> (a org.globus.cog.abstraction.coaster.service.job.manager.Cpu) at org.globus.cog.abstraction.coaster.service.job.manager.Block.isDone(Block.java:121) - locked <0x00000007fa51e898> (a java.util.ArrayList) at org.globus.cog.abstraction.coaster.service.job.manager.BlockQueueProcessor.cleanDoneBlocks(BlockQueueProcessor.java:225) at org.globus.cog.abstraction.coaster.service.job.manager.BlockQueueProcessor.updatePlan(BlockQueueProcessor.java:701) at org.globus.cog.abstraction.coaster.service.job.manager.BlockQueueProcessor.run(BlockQueueProcessor.java:133) Found 1 deadlock. http://www.ci.uchicago.edu/~davidk/logs/jstack-2012-10-04.log http://www.ci.uchicago.edu/~davidk/logs/cps-2012-10-04_00-41-24.log http://www.ci.uchicago.edu/~davidk/logs/RunDSSAT-20121004-0041-c833pbm0.log… -- Configure bugmail: https://bugzilla.mcs.anl.gov/swift/userprefs.cgi?tab=email ------- You are receiving this mail because: ------- You are watching all bug changes.

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