May 2013 - discuss - mailman3.cels.anl.gov

Re: [mpich-discuss] Network drive recognition problems by mpiexec
by Jayesh Krishna 02 May '13

02 May '13

Hi, Unfortunately there is no way to specify different credentials for mapping network drives and launching MPI processes (jobs). An easy fix would be to create a local Windows user with the same username and password as the user used to share the network drive and register this user with mpiexec. # Assuming User FOO is the user used to share the network drive (with password BAR) # Create a local Windows user FOO with the same password BAR # Run "mpiexec -register" # When mpiexec prompts for registering the user register FOO (with password BAR) # Run your jobs (All jobs will now be launched using FOO's credentials - network drives will now be mapped using FOO's credentials). Hope this helps. Regards, Jayesh ----- Original Message ----- From: "Robert Bauer" <Robert.Bauer(a)iconplc.com> To: "Jayesh Krishna" <jayesh(a)mcs.anl.gov> Cc: discuss(a)mpich.org Sent: Thursday, May 2, 2013 11:24:54 AM Subject: RE: [mpich-discuss] Network drive recognition problems by mpiexec Jayesh: When I establish the networked drive using "map network drive" , I identify of course computer name, and share drive name, but I also must enter in a user name and password that differs from my user account and password on the local computer on which I hope to execute mpiexec. I see your point, if I issue -map request through mpiexec, then the mpiexec would also need the user name and password pertaining to the computer that is hosting the network drive. How may I pass on these credentials to mpiexec? If this is going to turn in to quite a bit of back and forth, I would be happy to t-con with you on this. I am presently at the 215 number below. Robert J. Bauer, Ph.D. Vice President, Pharmacometrics, R&D ICON Development Solutions 7740 Milestone Parkway Suite 150 Hanover, MD 21076 Tel: (215) 616-6428 Mob: (925) 286-0769 Email: Robert.Bauer(a)iconplc.com Web: www.iconplc.com -----Original Message----- From: Jayesh Krishna [mailto:[email protected]] Sent: Thursday, May 02, 2013 12:15 PM To: Bauer, Robert Cc: discuss(a)mpich.org Subject: Re: [mpich-discuss] Network drive recognition problems by mpiexec Hi, Are the network drives shared/accessible by the user registered with mpiexec? The user registered with mpiexec is the user mpiexec uses to launch the job. While launching the process manager uses credentials of this user to map the network drives. The network drives could be mapped as any user from the Windows explorer. Please try disconnecting and reconnecting your mapped drive using the user registered with mpiexec. Regards, Jayesh ----- Original Message ----- From: "Robert Bauer" <Robert.Bauer(a)iconplc.com> To: "Jayesh Krishna" <jayesh(a)mcs.anl.gov>, discuss(a)mpich.org Sent: Thursday, May 2, 2013 11:07:55 AM Subject: RE: [mpich-discuss] Network drive recognition problems by mpiexec The network drives are already connected, prior to executing mpiexec. The network drives also work after mpiexec has executed. The network drives are not working while mpiexec is loaded. Robert J. Bauer, Ph.D. Vice President, Pharmacometrics, R&D ICON Development Solutions 7740 Milestone Parkway Suite 150 Hanover, MD 21076 Tel: (215) 616-6428 Mob: (925) 286-0769 Email: Robert.Bauer(a)iconplc.com Web: www.iconplc.com -----Original Message----- From: Jayesh Krishna [mailto:[email protected]] Sent: Thursday, May 02, 2013 10:22 AM To: discuss(a)mpich.org Cc: Bauer, Robert Subject: Re: [mpich-discuss] Network drive recognition problems by mpiexec Hi, Are the network drives accessible by the user launching the job (registered with mpiexec)? Try manually mapping the network drive, as the user registered with mpiexec, to make sure it works. Regards, Jayesh ----- Original Message ----- From: "Robert Bauer" <Robert.Bauer(a)iconplc.com> To: discuss(a)mpich.org Sent: Wednesday, May 1, 2013 6:19:19 PM Subject: [mpich-discuss] Network drive recognition problems by mpiexec The mpiexec program on a windows environment does not recognize networked drives despite my attempts at using –map and –mapall. Can anyone provide suggestions? Robert J. Bauer, Ph.D. Vice President, Pharmacometrics, R&D ICON Development Solutions 7740 Milestone Parkway Suite 150 Hanover, MD 21076 Tel: (215) 616-6428 Mob: (925) 286-0769 Email: Robert.Bauer(a)iconplc.com Web: www.iconplc.com ICON plc made the following annotations. ------------------------------------------------------------------------------ This e-mail transmission may contain confidential or legally privileged information that is intended only for the individual or entity named in the e-mail address. If you are not the intended recipient, you are hereby notified that any disclosure, copying, distribution, or reliance upon the contents of this e-mail is strictly prohibited. If you have received this e-mail transmission in error, please reply to the sender, so that ICON plc can arrange for proper delivery, and then please delete the message. Thank You, ICON plc South County Business Park Leopardstown Dublin 18 Ireland Registered number: 145835 ICON plc made the following annotations. ------------------------------------------------------------------------------ This e-mail transmission may contain confidential or legally privileged information that is intended only for the individual or entity named in the e-mail address. If you are not the intended recipient, you are hereby notified that any disclosure, copying, distribution, or reliance upon the contents of this e-mail is strictly prohibited. If you have received this e-mail transmission in error, please reply to the sender, so that ICON plc can arrange for proper delivery, and then please delete the message. Thank You, ICON plc South County Business Park Leopardstown Dublin 18 Ireland Registered number: 145835 _______________________________________________ discuss mailing list discuss(a)mpich.org To manage subscription options or unsubscribe: https://lists.mpich.org/mailman/listinfo/discuss ICON plc made the following annotations. ------------------------------------------------------------------------------ This e-mail transmission may contain confidential or legally privileged information that is intended only for the individual or entity named in the e-mail address. If you are not the intended recipient, you are hereby notified that any disclosure, copying, distribution, or reliance upon the contents of this e-mail is strictly prohibited. If you have received this e-mail transmission in error, please reply to the sender, so that ICON plc can arrange for proper delivery, and then please delete the message. Thank You, ICON plc South County Business Park Leopardstown Dublin 18 Ireland Registered number: 145835 ICON plc made the following annotations. ------------------------------------------------------------------------------ This e-mail transmission may contain confidential or legally privileged information that is intended only for the individual or entity named in the e-mail address. If you are not the intended recipient, you are hereby notified that any disclosure, copying, distribution, or reliance upon the contents of this e-mail is strictly prohibited. If you have received this e-mail transmission in error, please reply to the sender, so that ICON plc can arrange for proper delivery, and then please delete the message. Thank You, ICON plc South County Business Park Leopardstown Dublin 18 Ireland Registered number: 145835

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Re: [mpich-discuss] Network drive recognition problems by mpiexec
by Bauer, Robert 02 May '13

02 May '13

Jayesh: When I establish the networked drive using "map network drive" , I identify of course computer name, and share drive name, but I also must enter in a user name and password that differs from my user account and password on the local computer on which I hope to execute mpiexec. I see your point, if I issue -map request through mpiexec, then the mpiexec would also need the user name and password pertaining to the computer that is hosting the network drive. How may I pass on these credentials to mpiexec? If this is going to turn in to quite a bit of back and forth, I would be happy to t-con with you on this. I am presently at the 215 number below. Robert J. Bauer, Ph.D. Vice President, Pharmacometrics, R&D ICON Development Solutions 7740 Milestone Parkway Suite 150 Hanover, MD 21076 Tel: (215) 616-6428 Mob: (925) 286-0769 Email: Robert.Bauer(a)iconplc.com Web: www.iconplc.com -----Original Message----- From: Jayesh Krishna [mailto:[email protected]] Sent: Thursday, May 02, 2013 12:15 PM To: Bauer, Robert Cc: discuss(a)mpich.org Subject: Re: [mpich-discuss] Network drive recognition problems by mpiexec Hi, Are the network drives shared/accessible by the user registered with mpiexec? The user registered with mpiexec is the user mpiexec uses to launch the job. While launching the process manager uses credentials of this user to map the network drives. The network drives could be mapped as any user from the Windows explorer. Please try disconnecting and reconnecting your mapped drive using the user registered with mpiexec. Regards, Jayesh ----- Original Message ----- From: "Robert Bauer" <Robert.Bauer(a)iconplc.com> To: "Jayesh Krishna" <jayesh(a)mcs.anl.gov>, discuss(a)mpich.org Sent: Thursday, May 2, 2013 11:07:55 AM Subject: RE: [mpich-discuss] Network drive recognition problems by mpiexec The network drives are already connected, prior to executing mpiexec. The network drives also work after mpiexec has executed. The network drives are not working while mpiexec is loaded. Robert J. Bauer, Ph.D. Vice President, Pharmacometrics, R&D ICON Development Solutions 7740 Milestone Parkway Suite 150 Hanover, MD 21076 Tel: (215) 616-6428 Mob: (925) 286-0769 Email: Robert.Bauer(a)iconplc.com Web: www.iconplc.com -----Original Message----- From: Jayesh Krishna [mailto:[email protected]] Sent: Thursday, May 02, 2013 10:22 AM To: discuss(a)mpich.org Cc: Bauer, Robert Subject: Re: [mpich-discuss] Network drive recognition problems by mpiexec Hi, Are the network drives accessible by the user launching the job (registered with mpiexec)? Try manually mapping the network drive, as the user registered with mpiexec, to make sure it works. Regards, Jayesh ----- Original Message ----- From: "Robert Bauer" <Robert.Bauer(a)iconplc.com> To: discuss(a)mpich.org Sent: Wednesday, May 1, 2013 6:19:19 PM Subject: [mpich-discuss] Network drive recognition problems by mpiexec The mpiexec program on a windows environment does not recognize networked drives despite my attempts at using –map and –mapall. Can anyone provide suggestions? Robert J. Bauer, Ph.D. Vice President, Pharmacometrics, R&D ICON Development Solutions 7740 Milestone Parkway Suite 150 Hanover, MD 21076 Tel: (215) 616-6428 Mob: (925) 286-0769 Email: Robert.Bauer(a)iconplc.com Web: www.iconplc.com ICON plc made the following annotations. ------------------------------------------------------------------------------ This e-mail transmission may contain confidential or legally privileged information that is intended only for the individual or entity named in the e-mail address. If you are not the intended recipient, you are hereby notified that any disclosure, copying, distribution, or reliance upon the contents of this e-mail is strictly prohibited. If you have received this e-mail transmission in error, please reply to the sender, so that ICON plc can arrange for proper delivery, and then please delete the message. Thank You, ICON plc South County Business Park Leopardstown Dublin 18 Ireland Registered number: 145835 ICON plc made the following annotations. ------------------------------------------------------------------------------ This e-mail transmission may contain confidential or legally privileged information that is intended only for the individual or entity named in the e-mail address. If you are not the intended recipient, you are hereby notified that any disclosure, copying, distribution, or reliance upon the contents of this e-mail is strictly prohibited. If you have received this e-mail transmission in error, please reply to the sender, so that ICON plc can arrange for proper delivery, and then please delete the message. Thank You, ICON plc South County Business Park Leopardstown Dublin 18 Ireland Registered number: 145835 _______________________________________________ discuss mailing list discuss(a)mpich.org To manage subscription options or unsubscribe: https://lists.mpich.org/mailman/listinfo/discuss ICON plc made the following annotations. ------------------------------------------------------------------------------ This e-mail transmission may contain confidential or legally privileged information that is intended only for the individual or entity named in the e-mail address. If you are not the intended recipient, you are hereby notified that any disclosure, copying, distribution, or reliance upon the contents of this e-mail is strictly prohibited. If you have received this e-mail transmission in error, please reply to the sender, so that ICON plc can arrange for proper delivery, and then please delete the message. Thank You, ICON plc South County Business Park Leopardstown Dublin 18 Ireland Registered number: 145835 ICON plc made the following annotations. ------------------------------------------------------------------------------ This e-mail transmission may contain confidential or legally privileged information that is intended only for the individual or entity named in the e-mail address. If you are not the intended recipient, you are hereby notified that any disclosure, copying, distribution, or reliance upon the contents of this e-mail is strictly prohibited. If you have received this e-mail transmission in error, please reply to the sender, so that ICON plc can arrange for proper delivery, and then please delete the message. Thank You, ICON plc South County Business Park Leopardstown Dublin 18 Ireland Registered number: 145835

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Re: [mpich-discuss] Network drive recognition problems by mpiexec
by Jayesh Krishna 02 May '13

02 May '13

Hi, Are the network drives shared/accessible by the user registered with mpiexec? The user registered with mpiexec is the user mpiexec uses to launch the job. While launching the process manager uses credentials of this user to map the network drives. The network drives could be mapped as any user from the Windows explorer. Please try disconnecting and reconnecting your mapped drive using the user registered with mpiexec. Regards, Jayesh ----- Original Message ----- From: "Robert Bauer" <Robert.Bauer(a)iconplc.com> To: "Jayesh Krishna" <jayesh(a)mcs.anl.gov>, discuss(a)mpich.org Sent: Thursday, May 2, 2013 11:07:55 AM Subject: RE: [mpich-discuss] Network drive recognition problems by mpiexec The network drives are already connected, prior to executing mpiexec. The network drives also work after mpiexec has executed. The network drives are not working while mpiexec is loaded. Robert J. Bauer, Ph.D. Vice President, Pharmacometrics, R&D ICON Development Solutions 7740 Milestone Parkway Suite 150 Hanover, MD 21076 Tel: (215) 616-6428 Mob: (925) 286-0769 Email: Robert.Bauer(a)iconplc.com Web: www.iconplc.com -----Original Message----- From: Jayesh Krishna [mailto:[email protected]] Sent: Thursday, May 02, 2013 10:22 AM To: discuss(a)mpich.org Cc: Bauer, Robert Subject: Re: [mpich-discuss] Network drive recognition problems by mpiexec Hi, Are the network drives accessible by the user launching the job (registered with mpiexec)? Try manually mapping the network drive, as the user registered with mpiexec, to make sure it works. Regards, Jayesh ----- Original Message ----- From: "Robert Bauer" <Robert.Bauer(a)iconplc.com> To: discuss(a)mpich.org Sent: Wednesday, May 1, 2013 6:19:19 PM Subject: [mpich-discuss] Network drive recognition problems by mpiexec The mpiexec program on a windows environment does not recognize networked drives despite my attempts at using –map and –mapall. Can anyone provide suggestions? Robert J. Bauer, Ph.D. Vice President, Pharmacometrics, R&D ICON Development Solutions 7740 Milestone Parkway Suite 150 Hanover, MD 21076 Tel: (215) 616-6428 Mob: (925) 286-0769 Email: Robert.Bauer(a)iconplc.com Web: www.iconplc.com ICON plc made the following annotations. ------------------------------------------------------------------------------ This e-mail transmission may contain confidential or legally privileged information that is intended only for the individual or entity named in the e-mail address. If you are not the intended recipient, you are hereby notified that any disclosure, copying, distribution, or reliance upon the contents of this e-mail is strictly prohibited. If you have received this e-mail transmission in error, please reply to the sender, so that ICON plc can arrange for proper delivery, and then please delete the message. Thank You, ICON plc South County Business Park Leopardstown Dublin 18 Ireland Registered number: 145835 ICON plc made the following annotations. ------------------------------------------------------------------------------ This e-mail transmission may contain confidential or legally privileged information that is intended only for the individual or entity named in the e-mail address. If you are not the intended recipient, you are hereby notified that any disclosure, copying, distribution, or reliance upon the contents of this e-mail is strictly prohibited. If you have received this e-mail transmission in error, please reply to the sender, so that ICON plc can arrange for proper delivery, and then please delete the message. Thank You, ICON plc South County Business Park Leopardstown Dublin 18 Ireland Registered number: 145835 _______________________________________________ discuss mailing list discuss(a)mpich.org To manage subscription options or unsubscribe: https://lists.mpich.org/mailman/listinfo/discuss ICON plc made the following annotations. ------------------------------------------------------------------------------ This e-mail transmission may contain confidential or legally privileged information that is intended only for the individual or entity named in the e-mail address. If you are not the intended recipient, you are hereby notified that any disclosure, copying, distribution, or reliance upon the contents of this e-mail is strictly prohibited. If you have received this e-mail transmission in error, please reply to the sender, so that ICON plc can arrange for proper delivery, and then please delete the message. Thank You, ICON plc South County Business Park Leopardstown Dublin 18 Ireland Registered number: 145835

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Re: [mpich-discuss] Network drive recognition problems by mpiexec
by Bauer, Robert 02 May '13

02 May '13

The network drives are already connected, prior to executing mpiexec. The network drives also work after mpiexec has executed. The network drives are not working while mpiexec is loaded. Robert J. Bauer, Ph.D. Vice President, Pharmacometrics, R&D ICON Development Solutions 7740 Milestone Parkway Suite 150 Hanover, MD 21076 Tel: (215) 616-6428 Mob: (925) 286-0769 Email: Robert.Bauer(a)iconplc.com Web: www.iconplc.com -----Original Message----- From: Jayesh Krishna [mailto:[email protected]] Sent: Thursday, May 02, 2013 10:22 AM To: discuss(a)mpich.org Cc: Bauer, Robert Subject: Re: [mpich-discuss] Network drive recognition problems by mpiexec Hi, Are the network drives accessible by the user launching the job (registered with mpiexec)? Try manually mapping the network drive, as the user registered with mpiexec, to make sure it works. Regards, Jayesh ----- Original Message ----- From: "Robert Bauer" <Robert.Bauer(a)iconplc.com> To: discuss(a)mpich.org Sent: Wednesday, May 1, 2013 6:19:19 PM Subject: [mpich-discuss] Network drive recognition problems by mpiexec The mpiexec program on a windows environment does not recognize networked drives despite my attempts at using –map and –mapall. Can anyone provide suggestions? Robert J. Bauer, Ph.D. Vice President, Pharmacometrics, R&D ICON Development Solutions 7740 Milestone Parkway Suite 150 Hanover, MD 21076 Tel: (215) 616-6428 Mob: (925) 286-0769 Email: Robert.Bauer(a)iconplc.com Web: www.iconplc.com ICON plc made the following annotations. ------------------------------------------------------------------------------ This e-mail transmission may contain confidential or legally privileged information that is intended only for the individual or entity named in the e-mail address. If you are not the intended recipient, you are hereby notified that any disclosure, copying, distribution, or reliance upon the contents of this e-mail is strictly prohibited. If you have received this e-mail transmission in error, please reply to the sender, so that ICON plc can arrange for proper delivery, and then please delete the message. Thank You, ICON plc South County Business Park Leopardstown Dublin 18 Ireland Registered number: 145835 ICON plc made the following annotations. ------------------------------------------------------------------------------ This e-mail transmission may contain confidential or legally privileged information that is intended only for the individual or entity named in the e-mail address. If you are not the intended recipient, you are hereby notified that any disclosure, copying, distribution, or reliance upon the contents of this e-mail is strictly prohibited. If you have received this e-mail transmission in error, please reply to the sender, so that ICON plc can arrange for proper delivery, and then please delete the message. Thank You, ICON plc South County Business Park Leopardstown Dublin 18 Ireland Registered number: 145835 _______________________________________________ discuss mailing list discuss(a)mpich.org To manage subscription options or unsubscribe: https://lists.mpich.org/mailman/listinfo/discuss ICON plc made the following annotations. ------------------------------------------------------------------------------ This e-mail transmission may contain confidential or legally privileged information that is intended only for the individual or entity named in the e-mail address. If you are not the intended recipient, you are hereby notified that any disclosure, copying, distribution, or reliance upon the contents of this e-mail is strictly prohibited. If you have received this e-mail transmission in error, please reply to the sender, so that ICON plc can arrange for proper delivery, and then please delete the message. Thank You, ICON plc South County Business Park Leopardstown Dublin 18 Ireland Registered number: 145835

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Re: [mpich-discuss] install + config on windows
by Jayesh Krishna 02 May '13

02 May '13

Hi, Can you send us the output of running your job with mpiexec in the verbose mode (mpiexec -verbose -n 2 YOUR_MPI_PGM.exe)? Please copy-paste the mpiexec command and its output in the email. Regards, Jayesh (PS: I am assuming from your reply in the previous email that you can run a command like "mpiexec -n 2 C:\Progra~1\MPICH2\examples\cpi.exe" correctly) ----- Original Message ----- From: "spatiogis" <geo(a)spatiogis.fr> To: "Jayesh Krishna" <jayesh(a)mcs.anl.gov> Sent: Thursday, May 2, 2013 10:48:56 AM Subject: Re: [mpich-discuss] install + config on windows Hello, > Hi, > Are you able to run any other MPI programs? Try running the example > program, cpi.exe (C:\Program Files\MPICH2\examples\cpi.exe), to make > sure that your MPICH2 installation works. yes it does work > Installing MPICH2 on Windows 7 typically requires you to uninstall any > previous versions of MPICH2, launch an administrative command promt and > run "msiexec /i mpich2-installer.msi" to install MPICH2. yes it 's been installed like this... In wmpiconfig, the message is the following in the 'Get settings' line. Credentials for Utilisateur rejected connecting to host Aborting: Unable to connect to host The software I try to use is Taudem, which is intergrated inside Qgis. Launching a taudem process inside Qgis gives the same message. > Regards, > Jayesh Sincerely, Ben > > ----- Original Message ----- > From: "spatiogis" <geo(a)spatiogis.fr> > To: discuss(a)mpich.org > Sent: Thursday, May 2, 2013 10:08:23 AM > Subject: Re: [mpich-discuss] install + config on windows > > Hello, > > in my case Mpich is normally used to run .exe programs. I guess that > they > are already compiled... > The .exe files are integrated into a software, and accessed from menus > inside it. When I run one of the programs, the answer is actually "unable > to query host". > At the end, the process is not realised. It seems that this 'host' > question is a problem to the software... > > Sincerely, > > Ben. > > >> Hi, >> You can download MPICH2 binaries for Windows at >> http://www.mpich.org/downloads/ . >> You need to compile your MPI programs with MPICH2 to make it work. I >> would recommend recompiling your code after you install MPICH2 (If you >> have MPI program binaries pre-built with MPICH2 - instead of compiling >> them on your own - make sure that you install the same version of MPICH2 >> that was used to build the binaries). >> The wmpiregister program has a bug and you can ignore this error >> message ("...unable to query host"). Can you run your MPI program using >> mpiexec from a command prompt? >> >> Regards, >> Jayesh >> >> ----- Original Message ----- >> From: "spatiogis" <geo(a)spatiogis.fr> >> To: discuss(a)mpich.org >> Sent: Tuesday, April 30, 2013 9:26:35 AM >> Subject: [mpich-discuss] install + config on windows >> >> Hello, >> >> I'm not very good at computing, but I would like to install Mpich2 on >> windows 7 - 64 bits. There is only one pc, with one user plus the admin, >> and a simple core processor. >> >> I would like to know if it's mandatory to have compiling softwares with >> it to make it work, whereas it is asked in this case only to make run >> another software, and not for compiling (that would maybe save some disk >> space and simplify the installation) ? >> >> My second issue is that I must be missing something about the server >> configuration. I have installed Mpich from the .msi file, then >> configured >> the wmpiregister program with the Domain/user informations. >> >> There is this message displayed when trying to connect in the >> 'configurable settings' window : 'MPICH2 not installed or unable to >> query >> the host'. >> >> What is the host actually ? >> >> I know I am starting from very far, I am sorry for these very simple >> questions. Thanks if you can reply me, that would certainly save me some >> long hours of reading and testing ;) >> >> sincerely, >> >> Ben >> _______________________________________________ >> discuss mailing list discuss(a)mpich.org >> To manage subscription options or unsubscribe: >> https://lists.mpich.org/mailman/listinfo/discuss > > -- Benoit Véler Adhérent au groupe JAM Ingénierie 180 Avenue du Genevois, Parc d'Activité de Croix Rousse 73000 Chambéry http://www.spatiogis.fr 06-46-13-40-94

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Re: [mpich-discuss] install + config on windows
by Jayesh Krishna 02 May '13

02 May '13

Hi, Are you able to run any other MPI programs? Try running the example program, cpi.exe (C:\Program Files\MPICH2\examples\cpi.exe), to make sure that your MPICH2 installation works. Installing MPICH2 on Windows 7 typically requires you to uninstall any previous versions of MPICH2, launch an administrative command promt and run "msiexec /i mpich2-installer.msi" to install MPICH2. Regards, Jayesh ----- Original Message ----- From: "spatiogis" <geo(a)spatiogis.fr> To: discuss(a)mpich.org Sent: Thursday, May 2, 2013 10:08:23 AM Subject: Re: [mpich-discuss] install + config on windows Hello, in my case Mpich is normally used to run .exe programs. I guess that they are already compiled... The .exe files are integrated into a software, and accessed from menus inside it. When I run one of the programs, the answer is actually "unable to query host". At the end, the process is not realised. It seems that this 'host' question is a problem to the software... Sincerely, Ben. > Hi, > You can download MPICH2 binaries for Windows at > http://www.mpich.org/downloads/ . > You need to compile your MPI programs with MPICH2 to make it work. I > would recommend recompiling your code after you install MPICH2 (If you > have MPI program binaries pre-built with MPICH2 - instead of compiling > them on your own - make sure that you install the same version of MPICH2 > that was used to build the binaries). > The wmpiregister program has a bug and you can ignore this error > message ("...unable to query host"). Can you run your MPI program using > mpiexec from a command prompt? > > Regards, > Jayesh > > ----- Original Message ----- > From: "spatiogis" <geo(a)spatiogis.fr> > To: discuss(a)mpich.org > Sent: Tuesday, April 30, 2013 9:26:35 AM > Subject: [mpich-discuss] install + config on windows > > Hello, > > I'm not very good at computing, but I would like to install Mpich2 on > windows 7 - 64 bits. There is only one pc, with one user plus the admin, > and a simple core processor. > > I would like to know if it's mandatory to have compiling softwares with > it to make it work, whereas it is asked in this case only to make run > another software, and not for compiling (that would maybe save some disk > space and simplify the installation) ? > > My second issue is that I must be missing something about the server > configuration. I have installed Mpich from the .msi file, then configured > the wmpiregister program with the Domain/user informations. > > There is this message displayed when trying to connect in the > 'configurable settings' window : 'MPICH2 not installed or unable to query > the host'. > > What is the host actually ? > > I know I am starting from very far, I am sorry for these very simple > questions. Thanks if you can reply me, that would certainly save me some > long hours of reading and testing ;) > > sincerely, > > Ben > _______________________________________________ > discuss mailing list discuss(a)mpich.org > To manage subscription options or unsubscribe: > https://lists.mpich.org/mailman/listinfo/discuss -- Benoit Véler Adhérent au groupe JAM Ingénierie 180 Avenue du Genevois, Parc d'Activité de Croix Rousse 73000 Chambéry http://www.spatiogis.fr 06-46-13-40-94 _______________________________________________ discuss mailing list discuss(a)mpich.org To manage subscription options or unsubscribe: https://lists.mpich.org/mailman/listinfo/discuss

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Re: [mpich-discuss] install + config on windows
by spatiogis 02 May '13

02 May '13

Hello, in my case Mpich is normally used to run .exe programs. I guess that they are already compiled... The .exe files are integrated into a software, and accessed from menus inside it. When I run one of the programs, the answer is actually "unable to query host". At the end, the process is not realised. It seems that this 'host' question is a problem to the software... Sincerely, Ben. > Hi, > You can download MPICH2 binaries for Windows at > http://www.mpich.org/downloads/ . > You need to compile your MPI programs with MPICH2 to make it work. I > would recommend recompiling your code after you install MPICH2 (If you > have MPI program binaries pre-built with MPICH2 - instead of compiling > them on your own - make sure that you install the same version of MPICH2 > that was used to build the binaries). > The wmpiregister program has a bug and you can ignore this error > message ("...unable to query host"). Can you run your MPI program using > mpiexec from a command prompt? > > Regards, > Jayesh > > ----- Original Message ----- > From: "spatiogis" <geo(a)spatiogis.fr> > To: discuss(a)mpich.org > Sent: Tuesday, April 30, 2013 9:26:35 AM > Subject: [mpich-discuss] install + config on windows > > Hello, > > I'm not very good at computing, but I would like to install Mpich2 on > windows 7 - 64 bits. There is only one pc, with one user plus the admin, > and a simple core processor. > > I would like to know if it's mandatory to have compiling softwares with > it to make it work, whereas it is asked in this case only to make run > another software, and not for compiling (that would maybe save some disk > space and simplify the installation) ? > > My second issue is that I must be missing something about the server > configuration. I have installed Mpich from the .msi file, then configured > the wmpiregister program with the Domain/user informations. > > There is this message displayed when trying to connect in the > 'configurable settings' window : 'MPICH2 not installed or unable to query > the host'. > > What is the host actually ? > > I know I am starting from very far, I am sorry for these very simple > questions. Thanks if you can reply me, that would certainly save me some > long hours of reading and testing ;) > > sincerely, > > Ben > _______________________________________________ > discuss mailing list discuss(a)mpich.org > To manage subscription options or unsubscribe: > https://lists.mpich.org/mailman/listinfo/discuss -- Benoit Véler Adhérent au groupe JAM Ingénierie 180 Avenue du Genevois, Parc d'Activité de Croix Rousse 73000 Chambéry http://www.spatiogis.fr 06-46-13-40-94

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Re: [mpich-discuss] BLCR kernel module not present
by Wesley Bland 02 May '13

02 May '13

You should be able to add the blcr modules to the list of modules loaded at boot up by editing the file /etc/modules. Just add the names of the modules to the list. Wesley On May 1, 2013, at 1:08 PM, basma a.azeem <basmaabdelazeem(a)hotmail.com> wrote: > Thank you so much for your help > > i used "insmod" to install kernel module for blcr > > "sudo insmod /usr/local/lib/blcr/3.5.0-27-generic/blcr_imports.ko" > "sudo insmod /usr/local/lib/blcr/3.5.0-27-generic/blcr.ko" > > it works but i need to run these commands every time i shut down > i think that there is a method to have them installed permanently > > i am new to Linux and parallel programming also > > i need to find long running c/mpi applications to test blcr , the applications i will use > to test blcr should have an enough long execution time , i found many applications but with a short execution time . > > thank you > > > From: wbland(a)mcs.anl.gov > Date: Fri, 26 Apr 2013 14:33:59 -0500 > To: discuss(a)mpich.org > Subject: Re: [mpich-discuss] BLCR kernel module not present > > It looks like you might have missed installing the kernel module for BLCR. What is the output of `lsmod`? > > Alternatively, if you installed BLCR by using apt-get in Ubuntu, you should be able to use dkms to manage your kernel modules automatically. Make sure you have the package 'blcr-dkms' installed (you should be able to check this by typing `dims status`. > > Do either of those solutions solve your issue? > > Wesley > > On Apr 26, 2013, at 1:55 PM, basma a.azeem <basmaabdelazeem(a)hotmail.com> wrote: > > > > Thank you for your help > > > i installed BLCR 0.8.5 on my ubuntu 12.10 to be used for MPICH -3.0.3 > this version of blcr should support to kernels through 3.7.1 > > when i run the command : > basma@basma-Satellite-A500:~$ mpiexec --info > > results: > > HYDRA build details: > Version: 3.0.3 > Release Date: Thu Mar 28 16:01:21 CDT 2013 > CC: gcc > CXX: c++ > F77: no > F90: no > Configure options: '--disable-option-checking' '--prefix=/home/basma/mpich2-install' '--disable-f77' '--disable-fc' '--enable-checkpointing' '--with-hydra-ckpointlib=blcr' '--cache-file=/dev/null' '--srcdir=.' 'CC=gcc' 'CFLAGS= -O2' 'LDFLAGS= ' 'LIBS=-lrt -lcr -lpthread ' 'CPPFLAGS= -I/home/basma/libraries/mpich-3.0.3/src/mpl/include -I/home/basma/libraries/mpich-3.0.3/src/mpl/include -I/home/basma/libraries/mpich-3.0.3/src/openpa/src -I/home/basma/libraries/mpich-3.0.3/src/openpa/src -I/home/basma/libraries/mpich-3.0.3/src/mpi/romio/include' > Process Manager: pmi > Launchers available: ssh rsh fork slurm ll lsf sge manual persist > Topology libraries available: hwloc > Resource management kernels available: user slurm ll lsf sge pbs cobalt > Checkpointing libraries available: blcr > Demux engines available: poll select > > so i thought that every thing is ok but when i try to rum mpiexec it failed: > > basma@basma-Satellite-A500:~$ mpiexec -ckpointlib blcr -ckpoint-prefix /home/business/ckpts/app.ckpoint -ckpoint-interval 3600 -n 4 /home/basma/libraries/mpich-3.0.3/examples/cpi > > results: > > Fatal error in MPI_Init: Other MPI error, error stack: > MPIR_Init_thread(433)...: > MPID_Init(151)..........: channel initialization failed > MPIDI_CH3_Init(70)......: > MPID_nem_init(379)......: > MPIDI_nem_ckpt_init(153): BLCR kernel module not present > Fatal error in MPI_Init: Other MPI error, error stack: > MPIR_Init_thread(433)...: > MPID_Init(151)..........: channel initialization failed > MPIDI_CH3_Init(70)......: > MPID_nem_init(379)......: > MPIDI_nem_ckpt_init(153): BLCR kernel module not present > Fatal error in MPI_Init: Other MPI error, error stack: > MPIR_Init_thread(433)...: > MPID_Init(151)..........: channel initialization failed > MPIDI_CH3_Init(70)......: > MPID_nem_init(379)......: > MPIDI_nem_ckpt_init(153): BLCR kernel module not present > Fatal error in MPI_Init: Other MPI error, error stack: > MPIR_Init_thread(433)...: > MPID_Init(151)..........: channel initialization failed > MPIDI_CH3_Init(70)......: > MPID_nem_init(379)......: > MPIDI_nem_ckpt_init(153): BLCR kernel module not present > > =================================================================================== > = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES > = EXIT CODE: 1 > = CLEANING UP REMAINING PROCESSES > = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES > =================================================================================== > > > > i am a Linux and parallel programming beginner > > Thank you > > > _______________________________________________ > discuss mailing list discuss(a)mpich.org > To manage subscription options or unsubscribe: > https://lists.mpich.org/mailman/listinfo/discuss > > > _______________________________________________ discuss mailing list discuss(a)mpich.org To manage subscription options or unsubscribe: https://lists.mpich.org/mailman/listinfo/discuss > _______________________________________________ > discuss mailing list discuss(a)mpich.org > To manage subscription options or unsubscribe: > https://lists.mpich.org/mailman/listinfo/discuss

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Re: [mpich-discuss] Network drive recognition problems by mpiexec
by Jayesh Krishna 02 May '13

02 May '13

Hi, Are the network drives accessible by the user launching the job (registered with mpiexec)? Try manually mapping the network drive, as the user registered with mpiexec, to make sure it works. Regards, Jayesh ----- Original Message ----- From: "Robert Bauer" <Robert.Bauer(a)iconplc.com> To: discuss(a)mpich.org Sent: Wednesday, May 1, 2013 6:19:19 PM Subject: [mpich-discuss] Network drive recognition problems by mpiexec The mpiexec program on a windows environment does not recognize networked drives despite my attempts at using –map and –mapall. Can anyone provide suggestions? Robert J. Bauer, Ph.D. Vice President, Pharmacometrics, R&D ICON Development Solutions 7740 Milestone Parkway Suite 150 Hanover, MD 21076 Tel: (215) 616-6428 Mob: (925) 286-0769 Email: Robert.Bauer(a)iconplc.com Web: www.iconplc.com ICON plc made the following annotations. ------------------------------------------------------------------------------ This e-mail transmission may contain confidential or legally privileged information that is intended only for the individual or entity named in the e-mail address. If you are not the intended recipient, you are hereby notified that any disclosure, copying, distribution, or reliance upon the contents of this e-mail is strictly prohibited. If you have received this e-mail transmission in error, please reply to the sender, so that ICON plc can arrange for proper delivery, and then please delete the message. Thank You, ICON plc South County Business Park Leopardstown Dublin 18 Ireland Registered number: 145835 ICON plc made the following annotations. ------------------------------------------------------------------------------ This e-mail transmission may contain confidential or legally privileged information that is intended only for the individual or entity named in the e-mail address. If you are not the intended recipient, you are hereby notified that any disclosure, copying, distribution, or reliance upon the contents of this e-mail is strictly prohibited. If you have received this e-mail transmission in error, please reply to the sender, so that ICON plc can arrange for proper delivery, and then please delete the message. Thank You, ICON plc South County Business Park Leopardstown Dublin 18 Ireland Registered number: 145835 _______________________________________________ discuss mailing list discuss(a)mpich.org To manage subscription options or unsubscribe: https://lists.mpich.org/mailman/listinfo/discuss

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Re: [mpich-discuss] Error while connecting to the host
by Pavan Balaji 02 May '13

02 May '13

Hello, SMPD and windows are not supported any more within mpich. Please use Microsoft's MS-MPI, which is freely available. -- Pavan On 05/02/2013 01:48 AM US Central Time, Zana Karimi wrote: > Hi, > > I have a problem running my parallel program using MPICH2. I was > wondering if you could help me! > When I run mpiexec I get this error: > > ERROR:Connect on sock (host=ZANA-PC 192.168.1.13 , port=1472) > failed, exhaused all end points > SMPDU_Sock_post_connect failed. > > I will appreciate any help, > > Thanks in advance, > > Zana, > > > -- > ------------------------------------------------------------------------------------------- > ------------------------------------------------------------------------------------------- > *Zana Karimi* > Graduate Research Student, University of Colorado at Boulder > Email: karimi.zana(a)gmail.com <mailto:[email protected]>, > Zana.Karimi(a)colorado.edu <mailto:[email protected]> > > > > > > > _______________________________________________ > discuss mailing list discuss(a)mpich.org > To manage subscription options or unsubscribe: > https://lists.mpich.org/mailman/listinfo/discuss > -- Pavan Balaji http://www.mcs.anl.gov/~balaji

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