February 2018 - discuss - mailman3.cels.anl.gov

MPICH process frozen without any error message nor warning
by CEAM Meteorología 27 Feb '18

27 Feb '18

Hi everyone and thanks for your attention. I am trying to run a meteorological simulation with RAMS model ( http://vandenheever.atmos.colostate.edu/vdhpage/rams.php) in a new cluster with CentOs7 in all nodes. We have other applications running fine in the cluster, sending processes to each node,... everything seemed to run fine. But the RAMS model freezes at its first stage on the parallel run. RAMS developers recommend using mpich2-1.4.1 as they have successfully tested. If I try to run a parallel simulation on the master node it runs fine and starts the required number of processes. If I try to use the other nodes the simulation freezes, do not stop with an error message; RAMS model processes appear in all used nodes and in the master node but any output is created and the usual status messages from RAMS do not appear on the screen. The command line to run the model is [paco@Llamp RUN]$ time ../misc/mpich2-1.4.1/bin/mpirun -verbose -machinefile mpd.hosts -n 20 ./rams-6.2.03 -f RAMSIN The only warning I can find in the log file (see below) is "we don't understand the response get_result; forwarding downstream" but as I'm not an expert with mpich I can't figure out the reason of the freezing. Thanks in advance for your help Log file: [paco@l4 paco]$ ../mpiexec -verbose -outfile-pattern mpi.log -errfile-pattern mpierror.log -machinefile machs -np 40 ../rams-6.2.06 -f RAMSIN host: l3 host: l4 ================================================================================================== mpiexec options: ---------------- Base path: /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco/../ Launcher: (null) Debug level: 1 Enable X: -1 Global environment: ------------------- XDG_SESSION_ID=6511 HOSTNAME=l4 SELINUX_ROLE_REQUESTED= TERM=xterm-256color SHELL=/bin/bash HISTSIZE=1000 SSH_CLIENT=193.144.100.32 49462 22 SELINUX_USE_CURRENT_RANGE= SSH_TTY=/dev/pts/0 USER=paco LS_COLORS=rs=0:di=38;5;27:ln=38;5;51:mh=44;38;5;15:pi=40;38;5;11:so=38;5;13:do=38;5;5:bd=48;5;232;38;5;11:cd=48;5;232;38;5;3:or=48;5;232;38;5;9:mi=05;48;5;232;38;5;15:su=48;5;196;38;5;15:sg=48;5;11;38;5;16:ca=48;5;196;38;5;226:tw=48;5;10;38;5;16:ow=48;5;10;38;5;21:st=48;5;21;38;5;15:ex=38;5;34:*.tar=38;5;9:*.tgz=38;5;9:*.arc=38;5;9:*.arj=38;5;9:*.taz=38;5;9:*.lha=38;5;9:*.lz4=38;5;9:*.lzh=38;5;9:*.lzma=38;5;9:*.tlz=38;5;9:*.txz=38;5;9:*.tzo=38;5;9:*.t7z=38;5;9:*.zip=38;5;9:*.z=38;5;9:*.Z=38;5;9:*.dz=38;5;9:*.gz=38;5;9:*.lrz=38;5;9:*.lz=38;5;9:*.lzo=38;5;9:*.xz=38;5;9:*.bz2=38;5;9:*.bz=38;5;9:*.tbz=38;5;9:*.tbz2=38;5;9:*.tz=38;5;9:*.deb=38;5;9:*.rpm=38;5;9:*.jar=38;5;9:*.war=38;5;9:*.ear=38;5;9:*.sar=38;5;9:*.rar=38;5;9:*.alz=38;5;9:*.ace=38;5;9:*.zoo=38;5;9:*.cpio=38;5;9:*.7z=38;5;9:*.rz=38;5;9:*.cab=38;5;9:*.jpg=38;5;13:*.jpeg=38;5;13:*.gif=38;5;13:*.bmp=38;5;13:*.pbm=38;5;13:*.pgm=38;5;13:*.ppm=38;5;13:*.tga=38;5;13:*.xbm=38;5;13:*.xpm=38;5;13:*.tif=38;5;13:*.tiff=38;5;13:*.png=38;5;13:*.svg=38;5;13:*.svgz=38;5;13:*.mng=38;5;13:*.pcx=38;5;13:*.mov=38;5;13:*.mpg=38;5;13:*.mpeg=38;5;13:*.m2v=38;5;13:*.mkv=38;5;13:*.webm=38;5;13:*.ogm=38;5;13:*.mp4=38;5;13:*.m4v=38;5;13:*.mp4v=38;5;13:*.vob=38;5;13:*.qt=38;5;13:*.nuv=38;5;13:*.wmv=38;5;13:*.asf=38;5;13:*.rm=38;5;13:*.rmvb=38;5;13:*.flc=38;5;13:*.avi=38;5;13:*.fli=38;5;13:*.flv=38;5;13:*.gl=38;5;13:*.dl=38;5;13:*.xcf=38;5;13:*.xwd=38;5;13:*.yuv=38;5;13:*.cgm=38;5;13:*.emf=38;5;13:*.axv=38;5;13:*.anx=38;5;13:*.ogv=38;5;13:*.ogx=38;5;13:*.aac=38;5;45:*.au=38;5;45:*.flac=38;5;45:*.mid=38;5;45:*.midi=38;5;45:*.mka=38;5;45:*.mp3=38;5;45:*.mpc=38;5;45:*.ogg=38;5;45:*.ra=38;5;45:*.wav=38;5;45:*.axa=38;5;45:*.oga=38;5;45:*.spx=38;5;45:*.xspf=38;5;45: MAIL=/var/spool/mail/paco PATH=/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/home/paco/.local/bin:/home/paco/bin PWD=/export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco LANG=es_ES.UTF-8 MODULEPATH=/usr/share/Modules/modulefiles:/etc/modulefiles LOADEDMODULES= SELINUX_LEVEL_REQUESTED= HISTCONTROL=ignoredups SHLVL=1 HOME=/home/paco LOGNAME=paco SSH_CONNECTION=193.144.100.32 49462 193.144.100.46 22 MODULESHOME=/usr/share/Modules LESSOPEN=||/usr/bin/lesspipe.sh %s XDG_RUNTIME_DIR=/run/user/1003 BASH_FUNC_module()=() { eval `/usr/bin/modulecmd bash $*` } _=../mpiexec OLDPWD=/home/paco Hydra internal environment: --------------------------- GFORTRAN_UNBUFFERED_PRECONNECTED=y Proxy information: ********************* [1] proxy: l3 (1 cores) Exec list: ../rams-6.2.06 (1 processes); ../rams-6.2.06 (1 processes); ../rams-6.2.06 (1 processes); ../rams-6.2.06 (1 processes); ../rams-6.2.06 (1 processes); ../rams-6.2.06 (1 processes); ../rams-6.2.06 (1 processes); ../rams-6.2.06 (1 processes); ../rams-6.2.06 (1 processes); ../rams-6.2.06 (1 processes); ../rams-6.2.06 (1 processes); ../rams-6.2.06 (1 processes); ../rams-6.2.06 (1 processes); ../rams-6.2.06 (1 processes); ../rams-6.2.06 (1 processes); ../rams-6.2.06 (1 processes); ../rams-6.2.06 (1 processes); ../rams-6.2.06 (1 processes); ../rams-6.2.06 (1 processes); ../rams-6.2.06 (1 processes); [2] proxy: l4 (1 cores) Exec list: ../rams-6.2.06 (1 processes); ../rams-6.2.06 (1 processes); ../rams-6.2.06 (1 processes); ../rams-6.2.06 (1 processes); ../rams-6.2.06 (1 processes); ../rams-6.2.06 (1 processes); ../rams-6.2.06 (1 processes); ../rams-6.2.06 (1 processes); ../rams-6.2.06 (1 processes); ../rams-6.2.06 (1 processes); ../rams-6.2.06 (1 processes); ../rams-6.2.06 (1 processes); ../rams-6.2.06 (1 processes); ../rams-6.2.06 (1 processes); ../rams-6.2.06 (1 processes); ../rams-6.2.06 (1 processes); ../rams-6.2.06 (1 processes); ../rams-6.2.06 (1 processes); ../rams-6.2.06 (1 processes); ../rams-6.2.06 (1 processes); ================================================================================================== [mpiexec@l4] Timeout set to -1 (-1 means infinite) [mpiexec@l4] Got a control port string of l4:44483 Proxy launch args: /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco/../hydra_pmi_proxy --control-port l4:44483 --debug --rmk user --launcher ssh --demux poll --pgid 0 --retries 10 --proxy-id [mpiexec@l4] PMI FD: (null); PMI PORT: (null); PMI ID/RANK: -1 Arguments being passed to proxy 0: --version 1.4.1 --iface-ip-env-name MPICH_INTERFACE_HOSTNAME --hostname l3 --global-core-map 0,1,1 --filler-process-map 0,1,1 --global-process-count 40 --auto-cleanup 1 --pmi-rank -1 --pmi-kvsname kvs_32745_0 --pmi-process-mapping (vector,(0,2,1)) --ckpoint-num -1 --global-inherited-env 29 'XDG_SESSION_ID=6511' 'HOSTNAME=l4' 'SELINUX_ROLE_REQUESTED=' 'TERM=xterm-256color' 'SHELL=/bin/bash' 'HISTSIZE=1000' 'SSH_CLIENT=193.144.100.32 49462 22' 'SELINUX_USE_CURRENT_RANGE=' 'SSH_TTY=/dev/pts/0' 'USER=paco' 'LS_COLORS=rs=0:di=38;5;27:ln=38;5;51:mh=44;38;5;15:pi=40;38;5;11:so=38;5;13:do=38;5;5:bd=48;5;232;38;5;11:cd=48;5;232;38;5;3:or=48;5;232;38;5;9:mi=05;48;5;232;38;5;15:su=48;5;196;38;5;15:sg=48;5;11;38;5;16:ca=48;5;196;38;5;226:tw=48;5;10;38;5;16:ow=48;5;10;38;5;21:st=48;5;21;38;5;15:ex=38;5;34:*.tar=38;5;9:*.tgz=38;5;9:*.arc=38;5;9:*.arj=38;5;9:*.taz=38;5;9:*.lha=38;5;9:*.lz4=38;5;9:*.lzh=38;5;9:*.lzma=38;5;9:*.tlz=38;5;9:*.txz=38;5;9:*.tzo=38;5;9:*.t7z=38;5;9:*.zip=38;5;9:*.z=38;5;9:*.Z=38;5;9:*.dz=38;5;9:*.gz=38;5;9:*.lrz=38;5;9:*.lz=38;5;9:*.lzo=38;5;9:*.xz=38;5;9:*.bz2=38;5;9:*.bz=38;5;9:*.tbz=38;5;9:*.tbz2=38;5;9:*.tz=38;5;9:*.deb=38;5;9:*.rpm=38;5;9:*.jar=38;5;9:*.war=38;5;9:*.ear=38;5;9:*.sar=38;5;9:*.rar=38;5;9:*.alz=38;5;9:*.ace=38;5;9:*.zoo=38;5;9:*.cpio=38;5;9:*.7z=38;5;9:*.rz=38;5;9:*.cab=38;5;9:*.jpg=38;5;13:*.jpeg=38;5;13:*.gif=38;5;13:*.bmp=38;5;13:*.pbm=38;5;13:*.pgm=38;5;13:*.ppm=38;5;13:*.tga=38;5;13:*.xbm=38;5;13:*.xpm=38;5;13:*.tif=38;5;13:*.tiff=38;5;13:*.png=38;5;13:*.svg=38;5;13:*.svgz=38;5;13:*.mng=38;5;13:*.pcx=38;5;13:*.mov=38;5;13:*.mpg=38;5;13:*.mpeg=38;5;13:*.m2v=38;5;13:*.mkv=38;5;13:*.webm=38;5;13:*.ogm=38;5;13:*.mp4=38;5;13:*.m4v=38;5;13:*.mp4v=38;5;13:*.vob=38;5;13:*.qt=38;5;13:*.nuv=38;5;13:*.wmv=38;5;13:*.asf=38;5;13:*.rm=38;5;13:*.rmvb=38;5;13:*.flc=38;5;13:*.avi=38;5;13:*.fli=38;5;13:*.flv=38;5;13:*.gl=38;5;13:*.dl=38;5;13:*.xcf=38;5;13:*.xwd=38;5;13:*.yuv=38;5;13:*.cgm=38;5;13:*.emf=38;5;13:*.axv=38;5;13:*.anx=38;5;13:*.ogv=38;5;13:*.ogx=38;5;13:*.aac=38;5;45:*.au=38;5;45:*.flac=38;5;45:*.mid=38;5;45:*.midi=38;5;45:*.mka=38;5;45:*.mp3=38;5;45:*.mpc=38;5;45:*.ogg=38;5;45:*.ra=38;5;45:*.wav=38;5;45:*.axa=38;5;45:*.oga=38;5;45:*.spx=38;5;45:*.xspf=38;5;45:' 'MAIL=/var/spool/mail/paco' 'PATH=/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/home/paco/.local/bin:/home/paco/bin' 'PWD=/export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco' 'LANG=es_ES.UTF-8' 'MODULEPATH=/usr/share/Modules/modulefiles:/etc/modulefiles' 'LOADEDMODULES=' 'SELINUX_LEVEL_REQUESTED=' 'HISTCONTROL=ignoredups' 'SHLVL=1' 'HOME=/home/paco' 'LOGNAME=paco' 'SSH_CONNECTION=193.144.100.32 49462 193.144.100.46 22' 'MODULESHOME=/usr/share/Modules' 'LESSOPEN=||/usr/bin/lesspipe.sh %s' 'XDG_RUNTIME_DIR=/run/user/1003' 'BASH_FUNC_module()=() { eval `/usr/bin/modulecmd bash $*` }' '_=../mpiexec' 'OLDPWD=/home/paco' --global-user-env 0 --global-system-env 1 'GFORTRAN_UNBUFFERED_PRECONNECTED=y' --proxy-core-count 1 --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN [mpiexec@l4] PMI FD: (null); PMI PORT: (null); PMI ID/RANK: -1 Arguments being passed to proxy 1: --version 1.4.1 --iface-ip-env-name MPICH_INTERFACE_HOSTNAME --hostname l4 --global-core-map 1,1,0 --filler-process-map 1,1,0 --global-process-count 40 --auto-cleanup 1 --pmi-rank -1 --pmi-kvsname kvs_32745_0 --pmi-process-mapping (vector,(0,2,1)) --ckpoint-num -1 --global-inherited-env 29 'XDG_SESSION_ID=6511' 'HOSTNAME=l4' 'SELINUX_ROLE_REQUESTED=' 'TERM=xterm-256color' 'SHELL=/bin/bash' 'HISTSIZE=1000' 'SSH_CLIENT=193.144.100.32 49462 22' 'SELINUX_USE_CURRENT_RANGE=' 'SSH_TTY=/dev/pts/0' 'USER=paco' 'LS_COLORS=rs=0:di=38;5;27:ln=38;5;51:mh=44;38;5;15:pi=40;38;5;11:so=38;5;13:do=38;5;5:bd=48;5;232;38;5;11:cd=48;5;232;38;5;3:or=48;5;232;38;5;9:mi=05;48;5;232;38;5;15:su=48;5;196;38;5;15:sg=48;5;11;38;5;16:ca=48;5;196;38;5;226:tw=48;5;10;38;5;16:ow=48;5;10;38;5;21:st=48;5;21;38;5;15:ex=38;5;34:*.tar=38;5;9:*.tgz=38;5;9:*.arc=38;5;9:*.arj=38;5;9:*.taz=38;5;9:*.lha=38;5;9:*.lz4=38;5;9:*.lzh=38;5;9:*.lzma=38;5;9:*.tlz=38;5;9:*.txz=38;5;9:*.tzo=38;5;9:*.t7z=38;5;9:*.zip=38;5;9:*.z=38;5;9:*.Z=38;5;9:*.dz=38;5;9:*.gz=38;5;9:*.lrz=38;5;9:*.lz=38;5;9:*.lzo=38;5;9:*.xz=38;5;9:*.bz2=38;5;9:*.bz=38;5;9:*.tbz=38;5;9:*.tbz2=38;5;9:*.tz=38;5;9:*.deb=38;5;9:*.rpm=38;5;9:*.jar=38;5;9:*.war=38;5;9:*.ear=38;5;9:*.sar=38;5;9:*.rar=38;5;9:*.alz=38;5;9:*.ace=38;5;9:*.zoo=38;5;9:*.cpio=38;5;9:*.7z=38;5;9:*.rz=38;5;9:*.cab=38;5;9:*.jpg=38;5;13:*.jpeg=38;5;13:*.gif=38;5;13:*.bmp=38;5;13:*.pbm=38;5;13:*.pgm=38;5;13:*.ppm=38;5;13:*.tga=38;5;13:*.xbm=38;5;13:*.xpm=38;5;13:*.tif=38;5;13:*.tiff=38;5;13:*.png=38;5;13:*.svg=38;5;13:*.svgz=38;5;13:*.mng=38;5;13:*.pcx=38;5;13:*.mov=38;5;13:*.mpg=38;5;13:*.mpeg=38;5;13:*.m2v=38;5;13:*.mkv=38;5;13:*.webm=38;5;13:*.ogm=38;5;13:*.mp4=38;5;13:*.m4v=38;5;13:*.mp4v=38;5;13:*.vob=38;5;13:*.qt=38;5;13:*.nuv=38;5;13:*.wmv=38;5;13:*.asf=38;5;13:*.rm=38;5;13:*.rmvb=38;5;13:*.flc=38;5;13:*.avi=38;5;13:*.fli=38;5;13:*.flv=38;5;13:*.gl=38;5;13:*.dl=38;5;13:*.xcf=38;5;13:*.xwd=38;5;13:*.yuv=38;5;13:*.cgm=38;5;13:*.emf=38;5;13:*.axv=38;5;13:*.anx=38;5;13:*.ogv=38;5;13:*.ogx=38;5;13:*.aac=38;5;45:*.au=38;5;45:*.flac=38;5;45:*.mid=38;5;45:*.midi=38;5;45:*.mka=38;5;45:*.mp3=38;5;45:*.mpc=38;5;45:*.ogg=38;5;45:*.ra=38;5;45:*.wav=38;5;45:*.axa=38;5;45:*.oga=38;5;45:*.spx=38;5;45:*.xspf=38;5;45:' 'MAIL=/var/spool/mail/paco' 'PATH=/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/home/paco/.local/bin:/home/paco/bin' 'PWD=/export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco' 'LANG=es_ES.UTF-8' 'MODULEPATH=/usr/share/Modules/modulefiles:/etc/modulefiles' 'LOADEDMODULES=' 'SELINUX_LEVEL_REQUESTED=' 'HISTCONTROL=ignoredups' 'SHLVL=1' 'HOME=/home/paco' 'LOGNAME=paco' 'SSH_CONNECTION=193.144.100.32 49462 193.144.100.46 22' 'MODULESHOME=/usr/share/Modules' 'LESSOPEN=||/usr/bin/lesspipe.sh %s' 'XDG_RUNTIME_DIR=/run/user/1003' 'BASH_FUNC_module()=() { eval `/usr/bin/modulecmd bash $*` }' '_=../mpiexec' 'OLDPWD=/home/paco' --global-user-env 0 --global-system-env 1 'GFORTRAN_UNBUFFERED_PRECONNECTED=y' --proxy-core-count 1 --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN --exec --exec-appnum 0 --exec-proc-count 1 --exec-local-env 0 --exec-wdir /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco --exec-args 3 ../rams-6.2.06 -f RAMSIN [mpiexec@l4] Launch arguments: /usr/bin/ssh -x l3 "/export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco/../hydra_pmi_proxy" --control-port l4:44483 --debug --rmk user --launcher ssh --demux poll --pgid 0 --retries 10 --proxy-id 0 [mpiexec@l4] Launch arguments: /export4/RAMS/rams_20170906_release_6.2.06/bin.rams/paco/../hydra_pmi_proxy --control-port l4:44483 --debug --rmk user --launcher ssh --demux poll --pgid 0 --retries 10 --proxy-id 1 [proxy:0:1@l4] got pmi command (from 0): init pmi_version=1 pmi_subversion=1 [proxy:0:1@l4] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:1@l4] got pmi command (from 6): init pmi_version=1 pmi_subversion=1 [proxy:0:1@l4] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:1@l4] got pmi command (from 11): init pmi_version=1 pmi_subversion=1 [proxy:0:1@l4] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:1@l4] got pmi command (from 16): init pmi_version=1 pmi_subversion=1 [proxy:0:1@l4] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:1@l4] got pmi command (from 19): init pmi_version=1 pmi_subversion=1 [proxy:0:1@l4] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:1@l4] got pmi command (from 25): init pmi_version=1 pmi_subversion=1 [proxy:0:1@l4] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:1@l4] got pmi command (from 31): init pmi_version=1 pmi_subversion=1 [proxy:0:1@l4] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:1@l4] got pmi command (from 37): init pmi_version=1 pmi_subversion=1 [proxy:0:1@l4] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:1@l4] got pmi command (from 0): get_maxes [proxy:0:1@l4] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:1@l4] got pmi command (from 6): get_maxes [proxy:0:1@l4] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:1@l4] got pmi command (from 11): get_maxes [proxy:0:1@l4] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:1@l4] got pmi command (from 16): get_maxes [proxy:0:1@l4] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:1@l4] got pmi command (from 19): get_maxes [proxy:0:1@l4] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:1@l4] got pmi command (from 25): get_maxes [proxy:0:1@l4] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:1@l4] got pmi command (from 46): init pmi_version=1 pmi_subversion=1 [proxy:0:1@l4] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:1@l4] got pmi command (from 49): init pmi_version=1 pmi_subversion=1 [proxy:0:1@l4] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:1@l4] got pmi command (from 0): get_appnum [proxy:0:1@l4] PMI response: cmd=appnum appnum=0 [proxy:0:1@l4] got pmi command (from 6): get_appnum [proxy:0:1@l4] PMI response: cmd=appnum appnum=0 [proxy:0:1@l4] got pmi command (from 11): get_appnum [proxy:0:1@l4] PMI response: cmd=appnum appnum=0 [proxy:0:1@l4] got pmi command (from 16): get_appnum [proxy:0:1@l4] PMI response: cmd=appnum appnum=0 [proxy:0:1@l4] got pmi command (from 19): get_appnum [proxy:0:1@l4] PMI response: cmd=appnum appnum=0 [proxy:0:1@l4] got pmi command (from 25): get_appnum [proxy:0:1@l4] PMI response: cmd=appnum appnum=0 [proxy:0:1@l4] got pmi command (from 31): get_maxes [proxy:0:1@l4] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:1@l4] got pmi command (from 37): get_maxes [proxy:0:1@l4] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:1@l4] got pmi command (from 0): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] got pmi command (from 6): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] got pmi command (from 11): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] got pmi command (from 16): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] got pmi command (from 19): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] got pmi command (from 25): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] got pmi command (from 31): get_appnum [proxy:0:1@l4] PMI response: cmd=appnum appnum=0 [proxy:0:1@l4] got pmi command (from 46): get_maxes [proxy:0:1@l4] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:1@l4] got pmi command (from 49): get_maxes [proxy:0:1@l4] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:1@l4] got pmi command (from 0): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] got pmi command (from 6): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] got pmi command (from 11): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] got pmi command (from 19): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] got pmi command (from 25): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] got pmi command (from 31): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] got pmi command (from 37): get_appnum [proxy:0:1@l4] PMI response: cmd=appnum appnum=0 [proxy:0:1@l4] got pmi command (from 46): get_appnum [proxy:0:1@l4] PMI response: cmd=appnum appnum=0 [proxy:0:1@l4] got pmi command (from 0): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:1@l4] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:1@l4] got pmi command (from 6): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:1@l4] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:1@l4] got pmi command (from 11): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:1@l4] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:1@l4] got pmi command (from 19): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:1@l4] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:1@l4] got pmi command (from 25): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:1@l4] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:1@l4] got pmi command (from 37): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] got pmi command (from 49): get_appnum [proxy:0:1@l4] PMI response: cmd=appnum appnum=0 [proxy:0:1@l4] got pmi command (from 6): barrier_in [proxy:0:1@l4] got pmi command (from 11): barrier_in [proxy:0:1@l4] got pmi command (from 19): barrier_in [proxy:0:1@l4] got pmi command (from 25): barrier_in [proxy:0:1@l4] got pmi command (from 31): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] got pmi command (from 46): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] got pmi command (from 31): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:1@l4] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:1@l4] got pmi command (from 37): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] got pmi command (from 49): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] got pmi command (from 31): barrier_in [proxy:0:1@l4] got pmi command (from 37): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:1@l4] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:1@l4] got pmi command (from 46): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] got pmi command (from 52): init pmi_version=1 pmi_subversion=1 [proxy:0:1@l4] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:1@l4] got pmi command (from 37): barrier_in [proxy:0:1@l4] got pmi command (from 46): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:1@l4] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:1@l4] got pmi command (from 49): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] got pmi command (from 46): barrier_in [proxy:0:1@l4] got pmi command (from 52): get_maxes [proxy:0:1@l4] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:1@l4] got pmi command (from 55): init pmi_version=1 pmi_subversion=1 [proxy:0:1@l4] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:1@l4] got pmi command (from 49): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:1@l4] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:1@l4] got pmi command (from 52): get_appnum [proxy:0:1@l4] PMI response: cmd=appnum appnum=0 [proxy:0:1@l4] got pmi command (from 52): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] got pmi command (from 55): get_maxes [proxy:0:1@l4] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:1@l4] got pmi command (from 49): barrier_in [proxy:0:1@l4] got pmi command (from 52): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] got pmi command (from 55): get_appnum [proxy:0:1@l4] PMI response: cmd=appnum appnum=0 [proxy:0:1@l4] got pmi command (from 16): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] got pmi command (from 52): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:1@l4] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:1@l4] got pmi command (from 58): init pmi_version=1 pmi_subversion=1 [proxy:0:1@l4] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:1@l4] got pmi command (from 16): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:1@l4] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:1@l4] got pmi command (from 52): barrier_in [proxy:0:1@l4] got pmi command (from 55): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] got pmi command (from 16): barrier_in [proxy:0:1@l4] got pmi command (from 58): get_maxes [proxy:0:1@l4] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:1@l4] got pmi command (from 55): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] got pmi command (from 0): put kvsname=kvs_32745_0 key=sharedFilename[1] value=/dev/shm/mpich_shar_tmp42EbvZ [proxy:0:1@l4] we don't understand this command put; forwarding upstream [proxy:0:1@l4] got pmi command (from 58): get_appnum [mpiexec@l4] [pgid: 0] got PMI command: cmd=put kvsname=kvs_32745_0 key=sharedFilename[1] value=/dev/shm/mpich_shar_tmp42EbvZ [mpiexec@l4] PMI response to fd 6 pid 0: cmd=put_result rc=0 msg=success [proxy:0:1@l4] PMI response: cmd=appnum appnum=0 [proxy:0:1@l4] got pmi command (from 55): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:1@l4] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:1@l4] got pmi command (from 58): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] we don't understand the response put_result; forwarding downstream [proxy:0:1@l4] got pmi command (from 55): barrier_in [proxy:0:1@l4] got pmi command (from 58): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] got pmi command (from 64): init pmi_version=1 pmi_subversion=1 [proxy:0:1@l4] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:1@l4] got pmi command (from 0): barrier_in [proxy:0:1@l4] got pmi command (from 58): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:1@l4] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:1@l4] got pmi command (from 64): get_maxes [proxy:0:1@l4] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:1@l4] got pmi command (from 58): barrier_in [proxy:0:1@l4] got pmi command (from 64): get_appnum [proxy:0:1@l4] PMI response: cmd=appnum appnum=0 [proxy:0:1@l4] got pmi command (from 64): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] got pmi command (from 64): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] got pmi command (from 64): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:1@l4] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:1@l4] got pmi command (from 64): barrier_in [proxy:0:1@l4] got pmi command (from 28): init pmi_version=1 pmi_subversion=1 [proxy:0:1@l4] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:1@l4] got pmi command (from 28): get_maxes [proxy:0:1@l4] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:1@l4] got pmi command (from 28): get_appnum [proxy:0:1@l4] PMI response: cmd=appnum appnum=0 [proxy:0:1@l4] got pmi command (from 28): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] got pmi command (from 28): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] got pmi command (from 28): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:1@l4] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:1@l4] got pmi command (from 28): barrier_in [proxy:0:1@l4] got pmi command (from 43): init pmi_version=1 pmi_subversion=1 [proxy:0:1@l4] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:1@l4] got pmi command (from 43): get_maxes [proxy:0:1@l4] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:1@l4] got pmi command (from 43): get_appnum [proxy:0:1@l4] PMI response: cmd=appnum appnum=0 [proxy:0:1@l4] got pmi command (from 43): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] got pmi command (from 43): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] got pmi command (from 43): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:1@l4] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:1@l4] got pmi command (from 43): barrier_in [proxy:0:1@l4] got pmi command (from 40): init pmi_version=1 pmi_subversion=1 [proxy:0:1@l4] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:1@l4] got pmi command (from 40): get_maxes [proxy:0:1@l4] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:1@l4] got pmi command (from 40): get_appnum [proxy:0:1@l4] PMI response: cmd=appnum appnum=0 [proxy:0:1@l4] got pmi command (from 40): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] got pmi command (from 40): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] got pmi command (from 40): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:1@l4] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:1@l4] got pmi command (from 40): barrier_in [proxy:0:1@l4] got pmi command (from 22): init pmi_version=1 pmi_subversion=1 [proxy:0:1@l4] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:1@l4] got pmi command (from 22): get_maxes [proxy:0:1@l4] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:1@l4] got pmi command (from 22): get_appnum [proxy:0:1@l4] PMI response: cmd=appnum appnum=0 [proxy:0:1@l4] got pmi command (from 22): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] got pmi command (from 22): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] got pmi command (from 22): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:1@l4] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:1@l4] got pmi command (from 22): barrier_in [proxy:0:1@l4] got pmi command (from 34): init pmi_version=1 pmi_subversion=1 [proxy:0:1@l4] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:1@l4] got pmi command (from 61): init pmi_version=1 pmi_subversion=1 [proxy:0:1@l4] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:1@l4] got pmi command (from 34): get_maxes [proxy:0:1@l4] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:1@l4] got pmi command (from 61): get_maxes [proxy:0:1@l4] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:1@l4] got pmi command (from 34): get_appnum [proxy:0:1@l4] PMI response: cmd=appnum appnum=0 [proxy:0:1@l4] got pmi command (from 61): get_appnum [proxy:0:1@l4] PMI response: cmd=appnum appnum=0 [proxy:0:1@l4] got pmi command (from 34): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] got pmi command (from 61): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] got pmi command (from 34): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] got pmi command (from 61): get_my_kvsname [proxy:0:1@l4] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:1@l4] got pmi command (from 34): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:1@l4] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:1@l4] got pmi command (from 61): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:1@l4] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:1@l4] got pmi command (from 34): barrier_in [proxy:0:1@l4] got pmi command (from 61): barrier_in [mpiexec@l4] [pgid: 0] got PMI command: cmd=barrier_in [proxy:0:1@l4] forwarding command (cmd=barrier_in) upstream [proxy:0:0@l3] got pmi command (from 4): init pmi_version=1 pmi_subversion=1 [proxy:0:0@l3] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:0@l3] got pmi command (from 5): init pmi_version=1 pmi_subversion=1 [proxy:0:0@l3] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:0@l3] got pmi command (from 6): init pmi_version=1 pmi_subversion=1 [proxy:0:0@l3] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:0@l3] got pmi command (from 11): init pmi_version=1 pmi_subversion=1 [proxy:0:0@l3] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:0@l3] got pmi command (from 14): init pmi_version=1 pmi_subversion=1 [proxy:0:0@l3] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:0@l3] got pmi command (from 17): init pmi_version=1 pmi_subversion=1 [proxy:0:0@l3] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:0@l3] got pmi command (from 20): init pmi_version=1 pmi_subversion=1 [proxy:0:0@l3] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:0@l3] got pmi command (from 23): init pmi_version=1 pmi_subversion=1 [proxy:0:0@l3] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:0@l3] got pmi command (from 26): init pmi_version=1 pmi_subversion=1 [proxy:0:0@l3] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:0@l3] got pmi command (from 29): init pmi_version=1 pmi_subversion=1 [proxy:0:0@l3] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:0@l3] got pmi command (from 32): init pmi_version=1 pmi_subversion=1 [proxy:0:0@l3] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:0@l3] got pmi command (from 4): get_maxes [proxy:0:0@l3] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:0@l3] got pmi command (from 5): get_maxes [proxy:0:0@l3] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:0@l3] got pmi command (from 6): get_maxes [proxy:0:0@l3] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:0@l3] got pmi command (from 11): get_maxes [proxy:0:0@l3] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:0@l3] got pmi command (from 14): get_maxes [proxy:0:0@l3] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:0@l3] got pmi command (from 17): get_maxes [proxy:0:0@l3] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:0@l3] got pmi command (from 20): get_maxes [proxy:0:0@l3] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:0@l3] got pmi command (from 23): get_maxes [proxy:0:0@l3] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:0@l3] got pmi command (from 26): get_maxes [proxy:0:0@l3] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:0@l3] got pmi command (from 35): init pmi_version=1 pmi_subversion=1 [proxy:0:0@l3] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:0@l3] got pmi command (from 38): init pmi_version=1 pmi_subversion=1 [proxy:0:0@l3] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:0@l3] got pmi command (from 4): get_appnum [proxy:0:0@l3] PMI response: cmd=appnum appnum=0 [proxy:0:0@l3] got pmi command (from 5): get_appnum [proxy:0:0@l3] PMI response: cmd=appnum appnum=0 [proxy:0:0@l3] got pmi command (from 6): get_appnum [proxy:0:0@l3] PMI response: cmd=appnum appnum=0 [proxy:0:0@l3] got pmi command (from 11): get_appnum [proxy:0:0@l3] PMI response: cmd=appnum appnum=0 [proxy:0:0@l3] got pmi command (from 14): get_appnum [proxy:0:0@l3] PMI response: cmd=appnum appnum=0 [proxy:0:0@l3] got pmi command (from 17): get_appnum [proxy:0:0@l3] PMI response: cmd=appnum appnum=0 [proxy:0:0@l3] got pmi command (from 20): get_appnum [proxy:0:0@l3] PMI response: cmd=appnum appnum=0 [proxy:0:0@l3] got pmi command (from 23): get_appnum [proxy:0:0@l3] PMI response: cmd=appnum appnum=0 [proxy:0:0@l3] got pmi command (from 26): get_appnum [proxy:0:0@l3] PMI response: cmd=appnum appnum=0 [proxy:0:0@l3] got pmi command (from 29): get_maxes [proxy:0:0@l3] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:0@l3] got pmi command (from 32): get_maxes [proxy:0:0@l3] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:0@l3] got pmi command (from 4): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 5): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 6): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 11): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 14): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 17): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 20): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 23): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 26): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 29): get_appnum [proxy:0:0@l3] PMI response: cmd=appnum appnum=0 [proxy:0:0@l3] got pmi command (from 35): get_maxes [proxy:0:0@l3] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:0@l3] got pmi command (from 38): get_maxes [proxy:0:0@l3] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:0@l3] got pmi command (from 41): init pmi_version=1 pmi_subversion=1 [proxy:0:0@l3] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:0@l3] got pmi command (from 4): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 5): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 6): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 11): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 14): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 17): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 20): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 23): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 26): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 29): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 32): get_appnum [proxy:0:0@l3] PMI response: cmd=appnum appnum=0 [proxy:0:0@l3] got pmi command (from 35): get_appnum [proxy:0:0@l3] PMI response: cmd=appnum appnum=0 [proxy:0:0@l3] got pmi command (from 38): get_appnum [proxy:0:0@l3] PMI response: cmd=appnum appnum=0 [proxy:0:0@l3] got pmi command (from 4): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:0@l3] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:0@l3] got pmi command (from 5): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:0@l3] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:0@l3] got pmi command (from 6): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:0@l3] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:0@l3] got pmi command (from 11): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:0@l3] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:0@l3] got pmi command (from 14): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:0@l3] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:0@l3] got pmi command (from 17): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:0@l3] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:0@l3] got pmi command (from 20): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:0@l3] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:0@l3] got pmi command (from 23): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:0@l3] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:0@l3] got pmi command (from 26): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:0@l3] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:0@l3] got pmi command (from 32): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 35): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 41): get_maxes [proxy:0:0@l3] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:0@l3] got pmi command (from 5): barrier_in [proxy:0:0@l3] got pmi command (from 6): barrier_in [proxy:0:0@l3] got pmi command (from 11): barrier_in [proxy:0:0@l3] got pmi command (from 14): barrier_in [proxy:0:0@l3] got pmi command (from 17): barrier_in [proxy:0:0@l3] got pmi command (from 20): barrier_in [proxy:0:0@l3] got pmi command (from 23): barrier_in [proxy:0:0@l3] got pmi command (from 26): barrier_in [proxy:0:0@l3] got pmi command (from 29): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 38): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 29): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:0@l3] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:0@l3] got pmi command (from 32): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 35): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 41): get_appnum [proxy:0:0@l3] PMI response: cmd=appnum appnum=0 [proxy:0:0@l3] got pmi command (from 29): barrier_in [proxy:0:0@l3] got pmi command (from 32): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:0@l3] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:0@l3] got pmi command (from 35): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:0@l3] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:0@l3] got pmi command (from 38): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 32): barrier_in [proxy:0:0@l3] got pmi command (from 41): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 35): barrier_in [proxy:0:0@l3] got pmi command (from 38): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:0@l3] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:0@l3] got pmi command (from 38): barrier_in [proxy:0:0@l3] got pmi command (from 41): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 41): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:0@l3] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:0@l3] got pmi command (from 41): barrier_in [mpiexec@l4] [pgid: 0] got PMI command: cmd=put kvsname=kvs_32745_0 key=sharedFilename[0] value=/dev/shm/mpich_shar_tmphAojti [mpiexec@l4] PMI response to fd 9 pid 4: cmd=put_result rc=0 msg=success [proxy:0:0@l3] got pmi command (from 4): put kvsname=kvs_32745_0 key=sharedFilename[0] value=/dev/shm/mpich_shar_tmphAojti [proxy:0:0@l3] we don't understand this command put; forwarding upstream [proxy:0:0@l3] we don't understand the response put_result; forwarding downstream [proxy:0:0@l3] got pmi command (from 4): barrier_in [proxy:0:0@l3] got pmi command (from 56): init pmi_version=1 pmi_subversion=1 [proxy:0:0@l3] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:0@l3] got pmi command (from 50): init pmi_version=1 pmi_subversion=1 [proxy:0:0@l3] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:0@l3] got pmi command (from 56): get_maxes [proxy:0:0@l3] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:0@l3] got pmi command (from 59): init pmi_version=1 pmi_subversion=1 [proxy:0:0@l3] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:0@l3] got pmi command (from 56): get_appnum [proxy:0:0@l3] PMI response: cmd=appnum appnum=0 [proxy:0:0@l3] got pmi command (from 50): get_maxes [proxy:0:0@l3] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:0@l3] got pmi command (from 56): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 59): get_maxes [proxy:0:0@l3] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:0@l3] got pmi command (from 50): get_appnum [proxy:0:0@l3] PMI response: cmd=appnum appnum=0 [proxy:0:0@l3] got pmi command (from 59): get_appnum [proxy:0:0@l3] PMI response: cmd=appnum appnum=0 [proxy:0:0@l3] got pmi command (from 50): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 56): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 59): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 56): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:0@l3] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:0@l3] got pmi command (from 50): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 56): barrier_in [proxy:0:0@l3] got pmi command (from 59): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 50): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:0@l3] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:0@l3] got pmi command (from 59): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:0@l3] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:0@l3] got pmi command (from 50): barrier_in [proxy:0:0@l3] got pmi command (from 59): barrier_in [proxy:0:0@l3] got pmi command (from 44): init pmi_version=1 pmi_subversion=1 [proxy:0:0@l3] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:0@l3] got pmi command (from 53): init pmi_version=1 pmi_subversion=1 [proxy:0:0@l3] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:0@l3] got pmi command (from 44): get_maxes [proxy:0:0@l3] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:0@l3] got pmi command (from 53): get_maxes [proxy:0:0@l3] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:0@l3] got pmi command (from 44): get_appnum [proxy:0:0@l3] PMI response: cmd=appnum appnum=0 [proxy:0:0@l3] got pmi command (from 53): get_appnum [proxy:0:0@l3] PMI response: cmd=appnum appnum=0 [proxy:0:0@l3] got pmi command (from 44): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 53): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 44): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 53): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 44): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:0@l3] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:0@l3] got pmi command (from 53): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:0@l3] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:0@l3] got pmi command (from 44): barrier_in [proxy:0:0@l3] got pmi command (from 53): barrier_in [proxy:0:0@l3] got pmi command (from 47): init pmi_version=1 pmi_subversion=1 [proxy:0:0@l3] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0 [proxy:0:0@l3] got pmi command (from 47): get_maxes [proxy:0:0@l3] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=1024 [proxy:0:0@l3] got pmi command (from 47): get_appnum [proxy:0:0@l3] PMI response: cmd=appnum appnum=0 [proxy:0:0@l3] got pmi command (from 47): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 47): get_my_kvsname [proxy:0:0@l3] PMI response: cmd=my_kvsname kvsname=kvs_32745_0 [proxy:0:0@l3] got pmi command (from 47): get kvsname=kvs_32745_0 key=PMI_process_mapping [proxy:0:0@l3] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,2,1)) [proxy:0:0@l3] got pmi command (from 47): barrier_in [proxy:0:0@l3] forwarding command (cmd=barrier_in) upstream [mpiexec@l4] [pgid: 0] got PMI command: cmd=barrier_in [mpiexec@l4] PMI response to fd 9 pid 47: cmd=barrier_out [mpiexec@l4] PMI response to fd 6 pid 47: cmd=barrier_out [proxy:0:1@l4] PMI response: cmd=barrier_out [proxy:0:1@l4] PMI response: cmd=barrier_out [proxy:0:1@l4] PMI response: cmd=barrier_out [proxy:0:1@l4] PMI response: cmd=barrier_out [proxy:0:1@l4] PMI response: cmd=barrier_out [proxy:0:1@l4] PMI response: cmd=barrier_out [proxy:0:1@l4] PMI response: cmd=barrier_out [proxy:0:1@l4] PMI response: cmd=barrier_out [proxy:0:1@l4] PMI response: cmd=barrier_out [proxy:0:1@l4] PMI response: cmd=barrier_out [proxy:0:1@l4] PMI response: cmd=barrier_out [proxy:0:1@l4] PMI response: cmd=barrier_out [proxy:0:1@l4] PMI response: cmd=barrier_out [proxy:0:1@l4] PMI response: cmd=barrier_out [proxy:0:1@l4] PMI response: cmd=barrier_out [proxy:0:1@l4] PMI response: cmd=barrier_out [proxy:0:1@l4] PMI response: cmd=barrier_out [proxy:0:1@l4] PMI response: cmd=barrier_out [proxy:0:1@l4] PMI response: cmd=barrier_out [mpiexec@l4] [pgid: 0] got PMI command: cmd=get kvsname=kvs_32745_0 key=sharedFilename[0] [mpiexec@l4] PMI response to fd 9 pid 5: cmd=get_result rc=0 msg=success value=/dev/shm/mpich_shar_tmphAojti [proxy:0:0@l3] PMI response: cmd=barrier_out [proxy:0:0@l3] PMI response: cmd=barrier_out [proxy:0:0@l3] PMI response: cmd=barrier_out [proxy:0:0@l3] PMI response: cmd=barrier_out [proxy:0:0@l3] PMI response: cmd=barrier_out [proxy:0:0@l3] PMI response: cmd=barrier_out [proxy:0:0@l3] PMI response: cmd=barrier_out [proxy:0:0@l3] PMI response: cmd=barrier_out [proxy:0:0@l3] PMI response: cmd=barrier_out [proxy:0:0@l3] PMI response: cmd=barrier_out [proxy:0:0@l3] PMI response: cmd=barrier_out [proxy:0:0@l3] PMI response: cmd=barrier_out [proxy:0:0@l3] PMI response: cmd=barrier_out [proxy:0:0@l3] PMI response: cmd=barrier_out [proxy:0:0@l3] PMI response: cmd=barrier_out [proxy:0:0@l3] PMI response: cmd=barrier_out [proxy:0:0@l3] PMI response: cmd=barrier_out [proxy:0:0@l3] PMI response: cmd=barrier_out [proxy:0:0@l3] PMI response: cmd=barrier_out [proxy:0:0@l3] PMI response: cmd=barrier_out [proxy:0:0@l3] got pmi command (from 5): get kvsname=kvs_32745_0 key=sharedFilename[0] [proxy:0:0@l3] forwarding command (cmd=get kvsname=kvs_32745_0 key=sharedFilename[0]) upstream [proxy:0:0@l3] got pmi command (from 6): get kvsname=kvs_32745_0 key=sharedFilename[0] [proxy:0:0@l3] forwarding command (cmd=get kvsname=kvs_32745_0 key=sharedFilename[0]) upstream [proxy:0:0@l3] got pmi command (from 11): get kvsname=kvs_32745_0 key=sharedFilename[0] [proxy:0:0@l3] forwarding command (cmd=get kvsname=kvs_32745_0 key=sharedFilename[0]) upstream [proxy:0:0@l3] got pmi command (from 14): get kvsname=kvs_32745_0 key=sharedFilename[0] [proxy:0:0@l3] forwarding command (cmd=get kvsname=kvs_32745_0 key=sharedFilename[0]) upstream [proxy:0:0@l3] got pmi command (from 17): get kvsname=kvs_32745_0 key=sharedFilename[0] [proxy:0:0@l3] forwarding command (cmd=get kvsname=kvs_32745_0 key=sharedFilename[0]) upstream [proxy:0:0@l3] got pmi command (from 20): get kvsname=kvs_32745_0 key=sharedFilename[0] [proxy:0:0@l3] forwarding command (cmd=get kvsname=kvs_32745_0 key=sharedFilename[0]) upstream [proxy:0:0@l3] got pmi command (from 23): get kvsname=kvs_32745_0 key=sharedFilename[0] [proxy:0:0@l3] forwarding command (cmd=get kvsname=kvs_32745_0 key=sharedFilename[0]) upstream [proxy:0:0@l3] got pmi command (from 26): get kvsname=kvs_32745_0 key=sharedFilename[0] [proxy:0:0@l3] forwarding command (cmd=get kvsname=kvs_32745_0 key=sharedFilename[0]) upstream [proxy:0:0@l3] got pmi command (from 29): get kvsname=kvs_32745_0 key=sharedFilename[0] [proxy:0:0@l3] forwarding command (cmd=get kvsname=kvs_32745_0 key=sharedFilename[0]) upstream [proxy:0:0@l3] got pmi command (from 32): get kvsname=kvs_32745_0 key=sharedFilename[0] [proxy:0:0@l3] forwarding command (cmd=get kvsname=kvs_32745_0 key=sharedFilename[0]) upstream [proxy:0:0@l3] got pmi command (from 35): get kvsname=kvs_32745_0 key=sharedFilename[0] [proxy:0:0@l3] forwarding command (cmd=get kvsname=kvs_32745_0 key=sharedFilename[0]) upstream [proxy:0:1@l4] PMI response: cmd=barrier_out [proxy:0:1@l4] got pmi command (from 6): get kvsname=kvs_32745_0 key=sharedFilename[1] [proxy:0:1@l4] forwarding command (cmd=get kvsname=kvs_32745_0 key=sharedFilename[1]) upstream [proxy:0:1@l4] got pmi command (from 11): get kvsname=kvs_32745_0 key=sharedFilename[1] [proxy:0:1@l4] forwarding command (cmd=get kvsname=kvs_32745_0 key=sharedFilename[1]) upstream [proxy:0:1@l4] got pmi command (from 16): get kvsname=kvs_32745_0 key=sharedFilename[1] [proxy:0:1@l4] forwarding command (cmd=get kvsname=kvs_32745_0 key=sharedFilename[1]) upstream [proxy:0:1@l4] got pmi command (from 19): get kvsname=kvs_32745_0 key=sharedFilename[1] [proxy:0:1@l4] forwarding command (cmd=get kvsname=kvs_32745_0 key=sharedFilename[1]) upstream [proxy:0:1@l4] got pmi command (from 25): get kvsname=kvs_32745_0 key=sharedFilename[1] [proxy:0:1@l4] forwarding command (cmd=get kvsname=kvs_32745_0 key=sharedFilename[1]) upstream [proxy:0:1@l4] got pmi command (from 28): get kvsname=kvs_32745_0 key=sharedFilename[1] [proxy:0:1@l4] forwarding command (cmd=get kvsname=kvs_32745_0 key=sharedFilename[1]) upstream [proxy:0:1@l4] got pmi command (from 31): get kvsname=kvs_32745_0 key=sharedFilename[1] [proxy:0:1@l4] forwarding command (cmd=get kvsname=kvs_32745_0 key=sharedFilename[1]) upstream [proxy:0:1@l4] got pmi command (from 34): get kvsname=kvs_32745_0 key=sharedFilename[1] [proxy:0:1@l4] forwarding command (cmd=get kvsname=kvs_32745_0 key=sharedFilename[1]) upstream [proxy:0:1@l4] got pmi command (from 43): get kvsname=kvs_32745_0 key=sharedFilename[1] [proxy:0:1@l4] forwarding command (cmd=get kvsname=kvs_32745_0 key=sharedFilename[1]) upstream [proxy:0:1@l4] got pmi command (from 46): get kvsname=kvs_32745_0 key=sharedFilename[1] [proxy:0:1@l4] forwarding command (cmd=get kvsname=kvs_32745_0 key=sharedFilename[1]) upstream [proxy:0:1@l4] got pmi command (from 49): get kvsname=kvs_32745_0 key=sharedFilename[1] [proxy:0:1@l4] forwarding command (cmd=get kvsname=kvs_32745_0 key=sharedFilename[1]) upstream [proxy:0:1@l4] got pmi command (from 52): get kvsname=kvs_32745_0 key=sharedFilename[1] [proxy:0:1@l4] forwarding command (cmd=get kvsname=kvs_32745_0 key=sharedFilename[1]) upstream [proxy:0:1@l4] got pmi command (from 55): get kvsname=kvs_32745_0 key=sharedFilename[1] [proxy:0:1@l4] forwarding command (cmd=get kvsname=kvs_32745_0 key=sharedFilename[1]) upstream [proxy:0:1@l4] got pmi command (from 22): get kvsname=kvs_32745_0 key=sharedFilename[1] [proxy:0:1@l4] forwarding command (cmd=get kvsname=kvs_32745_0 key=sharedFilename[1]) upstream [proxy:0:1@l4] got pmi command (from 37): get kvsname=kvs_32745_0 key=sharedFilename[1] [proxy:0:1@l4] forwarding command (cmd=get kvsname=kvs_32745_0 key=sharedFilename[1]) upstream [proxy:0:1@l4] got pmi command (from 40): get kvsname=kvs_32745_0 key=sharedFilename[1] [proxy:0:1@l4] forwarding command (cmd=get kvsname=kvs_32745_0 key=sharedFilename[1]) upstream [proxy:0:1@l4] got pmi command (from 58): get kvsname=kvs_32745_0 key=sharedFilename[1] [proxy:0:1@l4] forwarding command (cmd=get kvsname=kvs_32745_0 key=sharedFilename[1]) upstream [proxy:0:1@l4] got pmi command (from 61): get kvsname=kvs_32745_0 key=sharedFilename[1] [proxy:0:1@l4] forwarding command (cmd=get kvsname=kvs_32745_0 key=sharedFilename[1]) upstream [proxy:0:1@l4] got pmi command (from 64): get kvsname=kvs_32745_0 key=sharedFilename[1] [proxy:0:1@l4] forwarding command (cmd=get kvsname=kvs_32745_0 key=sharedFilename[1]) upstream [mpiexec@l4] [pgid: 0] got PMI command: cmd=get kvsname=kvs_32745_0 key=sharedFilename[1] [mpiexec@l4] PMI response to fd 6 pid 6: cmd=get_result rc=0 msg=success value=/dev/shm/mpich_shar_tmp42EbvZ [mpiexec@l4] [pgid: 0] got PMI command: cmd=get kvsname=kvs_32745_0 key=sharedFilename[0] [mpiexec@l4] PMI response to fd 9 pid 6: cmd=get_result rc=0 msg=success value=/dev/shm/mpich_shar_tmphAojti [proxy:0:0@l3] got pmi command (from 38): get kvsname=kvs_32745_0 key=sharedFilename[0] [proxy:0:0@l3] forwarding command (cmd=get kvsname=kvs_32745_0 key=sharedFilename[0]) upstream [proxy:0:0@l3] got pmi command (from 41): get kvsname=kvs_32745_0 key=sharedFilename[0] [proxy:0:0@l3] forwarding command (cmd=get kvsname=kvs_32745_0 key=sharedFilename[0]) upstream [proxy:0:0@l3] got pmi command (from 44): get kvsname=kvs_32745_0 key=sharedFilename[0] [proxy:0:0@l3] forwarding command (cmd=get kvsname=kvs_32745_0 key=sharedFilename[0]) upstream [proxy:0:0@l3] got pmi command (from 47): get kvsname=kvs_32745_0 key=sharedFilename[0] [proxy:0:0@l3] forwarding command (cmd=get kvsname=kvs_32745_0 key=sharedFilename[0]) upstream [proxy:0:0@l3] got pmi command (from 50): get kvsname=kvs_32745_0 key=sharedFilename[0] [proxy:0:0@l3] forwarding command (cmd=get kvsname=kvs_32745_0 key=sharedFilename[0]) upstream [proxy:0:0@l3] got pmi command (from 53): get kvsname=kvs_32745_0 key=sharedFilename[0] [proxy:0:0@l3] forwarding command (cmd=get kvsname=kvs_32745_0 key=sharedFilename[0]) upstream [proxy:0:0@l3] we don't understand the response get_result; forwarding downstream [proxy:0:0@l3] got pmi command (from 56): get kvsname=kvs_32745_0 key=sharedFilename[0] [proxy:0:0@l3] forwarding command (cmd=get kvsname=kvs_32745_0 key=sharedFilename[0]) upstream [proxy:0:0@l3] got pmi command (from 59): get kvsname=kvs_32745_0 key=sharedFilename[0] [proxy:0:0@l3] forwarding command (cmd=get kvsname=kvs_32745_0 key=sharedFilename[0]) upstream [proxy:0:1@l4] we don't understand the response get_result; forwarding downstream [mpiexec@l4] [pgid: 0] got PMI command: cmd=get kvsname=kvs_32745_0 key=sharedFilename[1] [mpiexec@l4] PMI response to fd 6 pid 11: cmd=get_result rc=0 msg=success value=/dev _______________________________________________ discuss mailing list discuss(a)mpich.org To manage subscription options or unsubscribe: https://lists.mpich.org/mailman/listinfo/discuss

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Re: [mpich-discuss] Need help for validation in MPICH
by Min Si 19 Feb '18

19 Feb '18

Hi Himanshu, Unfortunately, MPICH no longer supports Windows. You can use MS-MPI for your environment. https://msdn.microsoft.com/en-us/library/bb524831(v=vs.85).aspx Min On 2018/02/19 10:46, himanshu sharma wrote: > Dear , > I am trying to use MPICH (1.3.2p 1) came with Lumerical software. I am > stuck at the validation step. The image is attached to the attachment. > Kindly find the attachment and help to solve this problem. > > With best Regards > Himanshu Sharma > > > _______________________________________________ > discuss mailing list discuss(a)mpich.org > To manage subscription options or unsubscribe: > https://lists.mpich.org/mailman/listinfo/discuss _______________________________________________ discuss mailing list discuss(a)mpich.org To manage subscription options or unsubscribe: https://lists.mpich.org/mailman/listinfo/discuss

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Need help for validation in MPICH
by himanshu sharma 19 Feb '18

19 Feb '18

Dear , I am trying to use MPICH (1.3.2p 1) came with Lumerical software. I am stuck at the validation step. The image is attached to the attachment. Kindly find the attachment and help to solve this problem. With best Regards Himanshu Sharma _______________________________________________ discuss mailing list discuss(a)mpich.org To manage subscription options or unsubscribe: https://lists.mpich.org/mailman/listinfo/discuss

1 0

(no subject)
by himanshu sharma 19 Feb '18

19 Feb '18

Dear , I am trying to use MPICH (1.3.2p 1) came with Lumerical software. I am stuck at the validation step. The image is attached to the attachment. Kindly find the attachment and help to solve this problem. With best Regards Himanshu Sharma _______________________________________________ discuss mailing list discuss(a)mpich.org To manage subscription options or unsubscribe: https://lists.mpich.org/mailman/listinfo/discuss

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Re: [mpich-discuss] Failure to install MPICH2 in OS X High Sierra due to missing clock_gettime
by Bland, Wesley 18 Feb '18

18 Feb '18

You're building a 5 year old version of MPICH (1.2.1p1). Can you try again with something a little more recent? The latest stable version is 3.2.1. On Feb 18, 2018, at 10:36 AM, Dennis Fisher <fisher(a)plessthan.com<mailto:[email protected]>> wrote: Dear MPICH team I am trying to install MPICH2 in OS X (High Sierra; XCODE and Command Line Tools both installed). The installation proceeds per the output below until it reports: configure: error: Requested timer clock_gettime (POSIX) is not available Full output appended below. Unfortunately, the MPICH2 Installer’s Guide does not provide any instructions for how to deal with this, with the exception of: Problems should be self-explanatory, but if not, send c.txt to mpich-discuss(a)mcs.anl.gov<mailto:[email protected]> It appears that the message is coming from ~ line 37903 of the configure script. Can you direct me? The command that I executed was: ./configure -prefix=/opt/mpich2-install & tee c.txt I also tried (same result): ./configure -prefix=/opt/mpich2-install --enable-sharedlibs=osx-gcc & tee c.txt Dennis Dennis Fisher MD P < (The "P Less Than" Company) Phone / Fax: 1-866-PLessThan (1-866-753-7784) www.PLessThan.com<http://www.plessthan.com/> PET694> ./configure -prefix=/opt/mpich2-install & tee c.txt [2] 56222 Configuring MPICH2 version 1.2.1p1 with '-prefix=/opt/mpich2-install' Running on system: Darwin Denniss-iMac.local 17.4.0 Darwin Kernel Version 17.4.0: Sun Dec 17 09:19:54 PST 2017; root:xnu-4570.41.2~1/RELEASE_X86_64 x86_64 Executing mpich2prereq in /opt/mpich2-1.2.1p1/src/mpid/ch3 with Executing mpich2prereq in /opt/mpich2-1.2.1p1/src/mpid/ch3/channels/nemesis sourcing /opt/mpich2-1.2.1p1/src/pm/mpd/mpich2prereq sourcing /opt/mpich2-1.2.1p1/src/pm/hydra/mpich2prereq sourcing /opt/mpich2-1.2.1p1/src/pm/gforker/mpich2prereq sourcing /opt/mpich2-1.2.1p1/src/pm/mpd/setup_pm checking for gcc... gcc checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking how to run the C preprocessor... gcc -E checking whether the compiler defines __func__... yes checking whether the compiler defines __FUNC__... no checking whether the compiler sets __FUNCTION__... yes checking whether C compiler accepts option -O2... yes checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes checking for type of weak symbol alias support... no checking whether __attribute__ ((weak)) allowed... yes checking whether __attribute ((weak_import)) allowed... yes checking for g77... no checking for xlf... no checking for f77... no checking for frt... no checking for pgf77... no checking for cf77... no checking for fort77... no checking for fl32... no checking for af77... no checking for xlf90... no checking for f90... no checking for pgf90... no checking for pghpf... no checking for epcf90... no checking for gfortran... gfortran checking whether we are using the GNU Fortran 77 compiler... yes checking whether gfortran accepts -g... yes checking whether Fortran 77 compiler accepts option -O2... yes checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes checking how to get verbose linking output from gfortran... -v checking for Fortran 77 libraries of gfortran... -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin16/6.3.0 -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin16/6.3.0/../../.. -lgfortran -lquadmath -lm checking whether gfortran accepts the FLIBS found by autoconf... yes checking whether C can link with -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin16/6.3.0 -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin16/6.3.0/../../.. -lgfortran -lquadmath -lm... yes checking for linker for Fortran main programs... Use Fortran to link programs checking whether Fortran 77 and C objects are compatible... yes checking for Fortran 77 name mangling... lower underscore checking what libraries are needed to link Fortran programs with C routines that use stdio... none checking whether Fortran init will work with C... yes checking for f90... no checking for xlf90... no checking for pgf90... no checking for ifort... no checking for epcf90... no checking for f95... no checking for fort... no checking for xlf95... no checking for lf95... no checking for pathf95... no checking for pathf90... no checking for g95... no checking for gfortran... gfortran checking that f works as the extension for Fortran 90 program... yes checking whether we are using the GNU Fortran 90 compiler... yes checking whether gfortran accepts -g... yes checking for extension for Fortran 90 programs... f90 checking whether the Fortran 90 compiler (gfortran ) works... yes checking whether the Fortran 90 compiler (gfortran ) is a cross-compiler... no checking whether Fortran 90 works with Fortran 77... yes checking whether Fortran accepts ! for comments... yes checking for include directory flag for Fortran... -I checking for Fortran 77 flag for library directories... `-L checking for which Fortran libraries are needed to link C with Fortran... none checking whether Fortran compiler processes .F files with C preprocessor... yes checking that f works as the extension for Fortran 90 program... yes checking whether we are using the GNU Fortran 90 compiler... (cached) yes checking whether gfortran accepts -g... (cached) yes checking for extension for Fortran 90 programs... f90 checking whether the Fortran 90 compiler (gfortran ) works... yes checking whether the Fortran 90 compiler (gfortran ) is a cross-compiler... no checking for Fortran 90 module extension... mod checking for Fortran 90 module include flag... -I checking whether Fortran 90 accepts f90 suffix... yes checking whether Fortran 90 compiler accepts option -O2... yes checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes checking whether Fortran 90 compiler processes .F90 files with C preprocessor... yes checking what libraries are needed to link Fortran90 programs with C routines that use stdio... none checking for f90 compiler vendor... gnu checking for c++... c++ checking whether we are using the GNU C++ compiler... yes checking whether c++ accepts -g... yes checking whether the C++ compiler c++ can build an executable... yes checking whether C++ compiler works with string... yes checking whether the compiler supports exceptions... yes checking whether the compiler recognizes bool as a built-in type... yes checking whether the compiler implements namespaces... yes checking whether <iostream> available... yes checking whether the compiler implements the namespace std... yes checking whether <math> available... no checking for GNU g++ version... 4 . 2 checking whether C++ compiler accepts option -O2... yes checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes checking for perl... /usr/bin/perl checking for ar... ar checking for ranlib... ranlib checking for killall... killall checking for a BSD-compatible install... /usr/bin/install -c checking whether install works... yes checking whether install breaks libraries... no checking whether mkdir -p works... yes checking for make... make checking whether clock skew breaks make... no checking whether make supports include... yes checking whether make allows comments in actions... yes checking for virtual path format... VPATH checking whether make sets CFLAGS... no checking for bash... /Users/fisher/bin/bash checking whether /Users/fisher/bin/bash supports arrays... yes checking for doctext... false checking for location of doctext style files... unavailable checking for an ANSI C-conforming const... yes checking for working volatile... yes checking for C/C++ restrict keyword... __restrict checking for inline... inline checking whether __attribute__ allowed... yes checking whether __attribute__((format)) allowed... yes checking whether byte ordering is bigendian... no checking whether C compiler allows unaligned doubles... yes checking whether gcc supports __func__... yes Using gcc to determine dependencies checking whether long double is supported... yes checking whether long long is supported... yes checking for max C struct integer alignment... eight checking for max C struct floating point alignment... sixteen checking for max C struct alignment of structs with doubles... eight checking for max C struct floating point alignment with long doubles... sixteen configure: WARNING: Structures containing long doubles may be aligned differently from structures with floats or longs. MPICH2 does not handle this case automatically and you should avoid assumed extents for structures containing float types. checking if alignment of structs with doubles is based on position... no checking if alignment of structs with long long ints is based on position... no checking if double alignment breaks rules, find actual alignment... no checking for alignment restrictions on pointers... int or better checking size of char... 1 checking size of unsigned char... 1 checking size of short... 2 checking size of unsigned short... 2 checking size of int... 4 checking size of unsigned int... 4 checking size of long... 8 checking size of unsigned long... 8 checking size of long long... 8 checking size of unsigned long long... 8 checking size of float... 4 checking size of double... 8 checking size of long double... 16 checking size of void *... 8 checking for ANSI C header files... no checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking size of wchar_t... 4 checking size of float_int... 8 checking size of double_int... 16 checking size of long_int... 16 checking size of short_int... 8 checking size of two_int... 8 checking size of long_double_int... 32 checking sys/bitypes.h usability... no checking sys/bitypes.h presence... no checking for sys/bitypes.h... no checking inttypes.h usability... yes checking inttypes.h presence... yes checking for inttypes.h... yes checking stdint.h usability... yes checking stdint.h presence... yes checking for stdint.h... yes checking for int8_t... yes checking for int16_t... yes checking for int32_t... yes checking for int64_t... yes checking for uint8_t... yes checking for uint16_t... yes checking for uint32_t... yes checking for uint64_t... yes checking size of _Bool... 1 checking size of float _Complex... 8 checking size of double _Complex... 16 checking size of long double _Complex... 32 checking for _Bool... yes checking for float _Complex... yes checking for double _Complex... yes checking for long double _Complex... yes checking for size of Fortran type integer... 4 checking for size of Fortran type real... 4 checking for size of Fortran type double precision... 8 checking whether integer*1 is supported... yes checking whether integer*2 is supported... yes checking whether integer*4 is supported... yes checking whether integer*8 is supported... yes checking whether integer*16 is supported... yes checking whether real*4 is supported... yes checking whether real*8 is supported... yes checking whether real*16 is supported... yes checking for C type matching Fortran integer... int checking for size of MPI_Status... 20 checking for values of Fortran logicals... True is 1 and False is 0 checking for Fortran 90 integer kind for 8-byte integers... 8 checking whether real*8 is supported in Fortran 90... yes checking size of bool... 1 checking how to run the C++ preprocessor... c++ -E checking complex usability... yes checking complex presence... yes checking for complex... yes checking size of Complex... 8 checking size of DoubleComplex... 16 checking size of LongDoubleComplex... 32 checking if char * pointers use byte addresses... yes checking for alignment restrictions on ... no checking for alignment restrictions on int32_t... no checking size of MPIR_Bsend_data_t... 88 checking for gcc __asm__ and pentium cmpxchgl instruction... no checking for gcc __asm__ and AMD x86_64 cmpxchgq instruction... yes checking for gcc __asm__ and IA64 xchg4 instruction... no checking for ANSI C header files... (cached) no checking stdlib.h usability... yes checking stdlib.h presence... yes checking for stdlib.h... yes checking stdarg.h usability... yes checking stdarg.h presence... yes checking for stdarg.h... yes checking sys/types.h usability... yes checking sys/types.h presence... yes checking for sys/types.h... yes checking string.h usability... yes checking string.h presence... yes checking for string.h... yes checking for inttypes.h... (cached) yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking for stddef.h... (cached) yes checking errno.h usability... yes checking errno.h presence... yes checking for errno.h... yes checking sys/socket.h usability... yes checking sys/socket.h presence... yes checking for sys/socket.h... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking unistd.h usability... yes checking unistd.h presence... yes checking for unistd.h... yes checking endian.h usability... no checking endian.h presence... no checking for endian.h... no checking assert.h usability... yes checking assert.h presence... yes checking for assert.h... yes checking sys/param.h usability... yes checking sys/param.h presence... yes checking for sys/param.h... yes checking for sys/uio.h... yes checking for size_t... yes checking for setitimer... yes checking for alarm... yes checking for vsnprintf... yes checking for vsprintf... yes checking whether vsnprintf needs a declaration... no checking for strerror... yes checking for strncasecmp... yes checking for snprintf... yes checking whether snprintf needs a declaration... no checking for va_copy... yes checking for variable argument list macro functionality... yes checking valgrind.h usability... no checking valgrind.h presence... no checking for valgrind.h... no checking memcheck.h usability... no checking memcheck.h presence... no checking for memcheck.h... no checking valgrind/valgrind.h usability... no checking valgrind/valgrind.h presence... no checking for valgrind/valgrind.h... no checking valgrind/memcheck.h usability... no checking valgrind/memcheck.h presence... no checking for valgrind/memcheck.h... no checking for working alloca.h... yes checking for alloca... yes checking for strdup... yes checking whether strdup needs a declaration... no checking for mkstemp... yes checking whether mkstemp needs a declaration... no checking for fdopen... yes checking whether fdopen needs a declaration... yes checking for putenv... yes checking whether putenv needs a declaration... no checking for clock_gettime... yes checking for clock_getres... yes checking for gethrtime... no checking for gettimeofday... yes checking for clock_gettime in -lrt... no configure: error: Requested timer clock_gettime (POSIX) is not available _______________________________________________ discuss mailing list discuss(a)mpich.org<mailto:[email protected]> To manage subscription options or unsubscribe: https://lists.mpich.org/mailman/listinfo/discuss _______________________________________________ discuss mailing list discuss(a)mpich.org To manage subscription options or unsubscribe: https://lists.mpich.org/mailman/listinfo/discuss

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Failure to install MPICH2 in OS X High Sierra due to missing clock_gettime
by Dennis Fisher 18 Feb '18

18 Feb '18

Dear MPICH team I am trying to install MPICH2 in OS X (High Sierra; XCODE and Command Line Tools both installed). The installation proceeds per the output below until it reports: configure: error: Requested timer clock_gettime (POSIX) is not available Full output appended below. Unfortunately, the MPICH2 Installer’s Guide does not provide any instructions for how to deal with this, with the exception of: Problems should be self-explanatory, but if not, send c.txt to mpich-discuss(a)mcs.anl.gov <mailto:[email protected]> It appears that the message is coming from ~ line 37903 of the configure script. Can you direct me? The command that I executed was: ./configure -prefix=/opt/mpich2-install & tee c.txt I also tried (same result): ./configure -prefix=/opt/mpich2-install --enable-sharedlibs=osx-gcc & tee c.txt Dennis Dennis Fisher MD P < (The "P Less Than" Company) Phone / Fax: 1-866-PLessThan (1-866-753-7784) www.PLessThan.com <http://www.plessthan.com/> PET694> ./configure -prefix=/opt/mpich2-install & tee c.txt [2] 56222 Configuring MPICH2 version 1.2.1p1 with '-prefix=/opt/mpich2-install' Running on system: Darwin Denniss-iMac.local 17.4.0 Darwin Kernel Version 17.4.0: Sun Dec 17 09:19:54 PST 2017; root:xnu-4570.41.2~1/RELEASE_X86_64 x86_64 Executing mpich2prereq in /opt/mpich2-1.2.1p1/src/mpid/ch3 with Executing mpich2prereq in /opt/mpich2-1.2.1p1/src/mpid/ch3/channels/nemesis sourcing /opt/mpich2-1.2.1p1/src/pm/mpd/mpich2prereq sourcing /opt/mpich2-1.2.1p1/src/pm/hydra/mpich2prereq sourcing /opt/mpich2-1.2.1p1/src/pm/gforker/mpich2prereq sourcing /opt/mpich2-1.2.1p1/src/pm/mpd/setup_pm checking for gcc... gcc checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking how to run the C preprocessor... gcc -E checking whether the compiler defines __func__... yes checking whether the compiler defines __FUNC__... no checking whether the compiler sets __FUNCTION__... yes checking whether C compiler accepts option -O2... yes checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes checking for type of weak symbol alias support... no checking whether __attribute__ ((weak)) allowed... yes checking whether __attribute ((weak_import)) allowed... yes checking for g77... no checking for xlf... no checking for f77... no checking for frt... no checking for pgf77... no checking for cf77... no checking for fort77... no checking for fl32... no checking for af77... no checking for xlf90... no checking for f90... no checking for pgf90... no checking for pghpf... no checking for epcf90... no checking for gfortran... gfortran checking whether we are using the GNU Fortran 77 compiler... yes checking whether gfortran accepts -g... yes checking whether Fortran 77 compiler accepts option -O2... yes checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes checking how to get verbose linking output from gfortran... -v checking for Fortran 77 libraries of gfortran... -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin16/6.3.0 -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin16/6.3.0/../../.. -lgfortran -lquadmath -lm checking whether gfortran accepts the FLIBS found by autoconf... yes checking whether C can link with -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin16/6.3.0 -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin16/6.3.0/../../.. -lgfortran -lquadmath -lm... yes checking for linker for Fortran main programs... Use Fortran to link programs checking whether Fortran 77 and C objects are compatible... yes checking for Fortran 77 name mangling... lower underscore checking what libraries are needed to link Fortran programs with C routines that use stdio... none checking whether Fortran init will work with C... yes checking for f90... no checking for xlf90... no checking for pgf90... no checking for ifort... no checking for epcf90... no checking for f95... no checking for fort... no checking for xlf95... no checking for lf95... no checking for pathf95... no checking for pathf90... no checking for g95... no checking for gfortran... gfortran checking that f works as the extension for Fortran 90 program... yes checking whether we are using the GNU Fortran 90 compiler... yes checking whether gfortran accepts -g... yes checking for extension for Fortran 90 programs... f90 checking whether the Fortran 90 compiler (gfortran ) works... yes checking whether the Fortran 90 compiler (gfortran ) is a cross-compiler... no checking whether Fortran 90 works with Fortran 77... yes checking whether Fortran accepts ! for comments... yes checking for include directory flag for Fortran... -I checking for Fortran 77 flag for library directories... `-L checking for which Fortran libraries are needed to link C with Fortran... none checking whether Fortran compiler processes .F files with C preprocessor... yes checking that f works as the extension for Fortran 90 program... yes checking whether we are using the GNU Fortran 90 compiler... (cached) yes checking whether gfortran accepts -g... (cached) yes checking for extension for Fortran 90 programs... f90 checking whether the Fortran 90 compiler (gfortran ) works... yes checking whether the Fortran 90 compiler (gfortran ) is a cross-compiler... no checking for Fortran 90 module extension... mod checking for Fortran 90 module include flag... -I checking whether Fortran 90 accepts f90 suffix... yes checking whether Fortran 90 compiler accepts option -O2... yes checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes checking whether Fortran 90 compiler processes .F90 files with C preprocessor... yes checking what libraries are needed to link Fortran90 programs with C routines that use stdio... none checking for f90 compiler vendor... gnu checking for c++... c++ checking whether we are using the GNU C++ compiler... yes checking whether c++ accepts -g... yes checking whether the C++ compiler c++ can build an executable... yes checking whether C++ compiler works with string... yes checking whether the compiler supports exceptions... yes checking whether the compiler recognizes bool as a built-in type... yes checking whether the compiler implements namespaces... yes checking whether <iostream> available... yes checking whether the compiler implements the namespace std... yes checking whether <math> available... no checking for GNU g++ version... 4 . 2 checking whether C++ compiler accepts option -O2... yes checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes checking for perl... /usr/bin/perl checking for ar... ar checking for ranlib... ranlib checking for killall... killall checking for a BSD-compatible install... /usr/bin/install -c checking whether install works... yes checking whether install breaks libraries... no checking whether mkdir -p works... yes checking for make... make checking whether clock skew breaks make... no checking whether make supports include... yes checking whether make allows comments in actions... yes checking for virtual path format... VPATH checking whether make sets CFLAGS... no checking for bash... /Users/fisher/bin/bash checking whether /Users/fisher/bin/bash supports arrays... yes checking for doctext... false checking for location of doctext style files... unavailable checking for an ANSI C-conforming const... yes checking for working volatile... yes checking for C/C++ restrict keyword... __restrict checking for inline... inline checking whether __attribute__ allowed... yes checking whether __attribute__((format)) allowed... yes checking whether byte ordering is bigendian... no checking whether C compiler allows unaligned doubles... yes checking whether gcc supports __func__... yes Using gcc to determine dependencies checking whether long double is supported... yes checking whether long long is supported... yes checking for max C struct integer alignment... eight checking for max C struct floating point alignment... sixteen checking for max C struct alignment of structs with doubles... eight checking for max C struct floating point alignment with long doubles... sixteen configure: WARNING: Structures containing long doubles may be aligned differently from structures with floats or longs. 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Re: [mpich-discuss] nonblocking I/O sequence
by Éric Chamberland 16 Feb '18

16 Feb '18

Hi, when I developped our I/O routines, I did had to end any split collective call on a file before starting a new one, and it is said to do so: On any MPI process, each file handle may have at most one active split collective operation at any time. here: http://mpi.deino.net/mpi_functions/MPI_File_read_at_all_begin.html Hope this help... Eric Le 18-02-16 à 16:14, Thakur, Rajeev a écrit : > In Section 13.4.1, under Positioning (pg 507 of MPI 3.1), it says > > "In a nonblocking or split collective operation, the pointer is updated by the call that initiates the I/O” > > So the file pointer is updated after each call to MPI_File_iread_all. This function uses the individual (local to each process) file pointer, so it should be independent of the number of ranks. If you are seeing some other behavior, it would be useful if you can send a small test program. > > Rajeev > > > >> On Feb 6, 2018, at 9:07 AM, Martin Pokorny <mpokorny(a)nrao.edu> wrote: >> >> I originally posted the following to the mpi-forum mailing list, but >> have not received a reply. Perhaps someone on this list can help me out. >> >> I'd like to ask for some clarification on the expected outcome of a sequence of calls to non-blocking MPI-IO functions on a single file handle. To be concrete, assume a sequence of calls to MPI_File_iread_all(). My question concerns the result of making a new request before a previous request has completed. Sec 13.6.5 of the standard says "The call initiates the operation which may progress independently of any communication, computation, or I/O.", which could be interpreted to mean there's no guarantee that the second call will start reading from the position of the file pointer after the completion of the previous request. In some testing that I've done, when one request does not wait for the previous request to complete, I get inconsistent results in the sense that the following read does or does not start from the file pointer position at the completion of the previous read (seeming to depend on the number of ranks, but there could be more to that effect). I'm uncertain whether the inconsistency that I'm seeing is to be expected, or might point to a bug in the MPI library implementation. >> >> -- >> Martin Pokorny >> Software Engineer >> Jansky Very Large Array correlator back-end and CASA software >> National Radio Astronomy Observatory - New Mexico Operations >> _______________________________________________ >> discuss mailing list discuss(a)mpich.org >> To manage subscription options or unsubscribe: >> https://lists.mpich.org/mailman/listinfo/discuss > _______________________________________________ > discuss mailing list discuss(a)mpich.org > To manage subscription options or unsubscribe: > https://lists.mpich.org/mailman/listinfo/discuss _______________________________________________ discuss mailing list discuss(a)mpich.org To manage subscription options or unsubscribe: https://lists.mpich.org/mailman/listinfo/discuss

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Re: [mpich-discuss] nonblocking I/O sequence
by Thakur, Rajeev 16 Feb '18

16 Feb '18

In Section 13.4.1, under Positioning (pg 507 of MPI 3.1), it says "In a nonblocking or split collective operation, the pointer is updated by the call that initiates the I/O” So the file pointer is updated after each call to MPI_File_iread_all. This function uses the individual (local to each process) file pointer, so it should be independent of the number of ranks. If you are seeing some other behavior, it would be useful if you can send a small test program. Rajeev > On Feb 6, 2018, at 9:07 AM, Martin Pokorny <mpokorny(a)nrao.edu> wrote: > > I originally posted the following to the mpi-forum mailing list, but > have not received a reply. Perhaps someone on this list can help me out. > > I'd like to ask for some clarification on the expected outcome of a sequence of calls to non-blocking MPI-IO functions on a single file handle. To be concrete, assume a sequence of calls to MPI_File_iread_all(). My question concerns the result of making a new request before a previous request has completed. Sec 13.6.5 of the standard says "The call initiates the operation which may progress independently of any communication, computation, or I/O.", which could be interpreted to mean there's no guarantee that the second call will start reading from the position of the file pointer after the completion of the previous request. In some testing that I've done, when one request does not wait for the previous request to complete, I get inconsistent results in the sense that the following read does or does not start from the file pointer position at the completion of the previous read (seeming to depend on the number of ranks, but there could be more to that effect). I'm uncertain whether the inconsistency that I'm seeing is to be expected, or might point to a bug in the MPI library implementation. > > -- > Martin Pokorny > Software Engineer > Jansky Very Large Array correlator back-end and CASA software > National Radio Astronomy Observatory - New Mexico Operations > _______________________________________________ > discuss mailing list discuss(a)mpich.org > To manage subscription options or unsubscribe: > https://lists.mpich.org/mailman/listinfo/discuss _______________________________________________ discuss mailing list discuss(a)mpich.org To manage subscription options or unsubscribe: https://lists.mpich.org/mailman/listinfo/discuss

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nonblocking I/O sequence
by Martin Pokorny 06 Feb '18

06 Feb '18

I originally posted the following to the mpi-forum mailing list, but have not received a reply. Perhaps someone on this list can help me out. I'd like to ask for some clarification on the expected outcome of a sequence of calls to non-blocking MPI-IO functions on a single file handle. To be concrete, assume a sequence of calls to MPI_File_iread_all(). My question concerns the result of making a new request before a previous request has completed. Sec 13.6.5 of the standard says "The call initiates the operation which may progress independently of any communication, computation, or I/O.", which could be interpreted to mean there's no guarantee that the second call will start reading from the position of the file pointer after the completion of the previous request. In some testing that I've done, when one request does not wait for the previous request to complete, I get inconsistent results in the sense that the following read does or does not start from the file pointer position at the completion of the previous read (seeming to depend on the number of ranks, but there could be more to that effect). I'm uncertain whether the inconsistency that I'm seeing is to be expected, or might point to a bug in the MPI library implementation. -- Martin Pokorny Software Engineer Jansky Very Large Array correlator back-end and CASA software National Radio Astronomy Observatory - New Mexico Operations _______________________________________________ discuss mailing list discuss(a)mpich.org To manage subscription options or unsubscribe: https://lists.mpich.org/mailman/listinfo/discuss

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MPICH install name (in Mac OS X)
by lille stor 01 Feb '18

01 Feb '18

Hi, I have successfully built MPICH 3.2.1 in Mac OS X 10.8 using GNU GCC 4.9 and LLVM LD 3.7.1. Amongst others, the result of this build was a shared library called libmpi.12.dylib. When executing "otool -L libmpi.12.dylib" (the equivalent in Linux would be "ldd libmpi.12.dylib"), I can see that the install name of this shared library has an absolute path, namely: libmpi.12.dylib: /Users/dummy/workspace/mpich.3.2.1/buil/lib/libmpi.12.dylib (compatibility version 14.0.0, current version 14.1.0) (...) To change the install name, one usually passes option "-Wl,-install_name,XYZ" (where XYZ is the new install name, which can be a relative path such as ../workspace/libmpi.12.dylib) to the linker. My question is: how can I pass this option to MPICH configure script so that the resulting shared library (libmpi.12.dylib) does not have an absolute path as its install name? Thank you! L. _______________________________________________ discuss mailing list discuss(a)mpich.org To manage subscription options or unsubscribe: https://lists.mpich.org/mailman/listinfo/discuss

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