April 2013 - discuss - mailman3.cels.anl.gov

Re: [mpich-discuss] Problem in Building MPICH
by Ali Behjatian 13 Apr '13

13 Apr '13

First of all, thank you very much for your support. I was able to build MPICH by adding "--without-hydra-ckpointlib" to the configure line. Thus I have attached 2 config.log files for you. One without using the above option (config.log) and another one after using that. Ali On Sat, Apr 13, 2013 at 9:30 AM, Pavan Balaji <balaji(a)mcs.anl.gov> wrote: > > Can you also send us the config.log from src/pm/hydra? Hydra should be > checking for blcr support in configure before enabling it. > > -- Pavan > > On 04/12/2013 05:44 PM US Central Time, Dave Goodell wrote: > > Sorry, looks like I gave you the wrong configure option. Try > "--without-hydra-ckpointlib". > > > > -Dave > > > > On Apr 12, 2013, at 5:19 PM CDT, Ali Behjatian <ali.behjatian(a)gmail.com> > wrote: > > > >> I think I got the same error again. > >> > >> Thanks > >> Ali > >> > >> > >> On Fri, Apr 12, 2013 at 4:37 PM, Dave Goodell <goodell(a)mcs.anl.gov> > wrote: > >> On Apr 12, 2013, at 4:30 PM CDT, Ali Behjatian <ali.behjatian(a)gmail.com> > wrote: > >> > >>> I tried to follow the instructions in the MPICH2 Installer's Guide but > >>> I received an error after running "make 2>&1 | tee m.txt". I appreciate > >>> if you help me to fix this problem. > >> > >> Try adding "--without-blcr" on your configure line. It looks like > hydra, our configure tests, and your BLCR installation don't agree on > something. Ideally we would/will fix the configure test, though this is > the easiest way for you to get a working MPICH. > >> > >> -Dave > >> > >> _______________________________________________ > >> discuss mailing list discuss(a)mpich.org > >> To manage subscription options or unsubscribe: > >> https://lists.mpich.org/mailman/listinfo/discuss > >> > >> <c.txt><m.txt>_______________________________________________ > >> discuss mailing list discuss(a)mpich.org > >> To manage subscription options or unsubscribe: > >> https://lists.mpich.org/mailman/listinfo/discuss > > > > _______________________________________________ > > discuss mailing list discuss(a)mpich.org > > To manage subscription options or unsubscribe: > > https://lists.mpich.org/mailman/listinfo/discuss > > > > -- > Pavan Balaji > http://www.mcs.anl.gov/~balaji > _______________________________________________ > discuss mailing list discuss(a)mpich.org > To manage subscription options or unsubscribe: > https://lists.mpich.org/mailman/listinfo/discuss >

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Re: [mpich-discuss] Problem in Building MPICH
by Pavan Balaji 13 Apr '13

13 Apr '13

Can you also send us the config.log from src/pm/hydra? Hydra should be checking for blcr support in configure before enabling it. -- Pavan On 04/12/2013 05:44 PM US Central Time, Dave Goodell wrote: > Sorry, looks like I gave you the wrong configure option. Try "--without-hydra-ckpointlib". > > -Dave > > On Apr 12, 2013, at 5:19 PM CDT, Ali Behjatian <ali.behjatian(a)gmail.com> wrote: > >> I think I got the same error again. >> >> Thanks >> Ali >> >> >> On Fri, Apr 12, 2013 at 4:37 PM, Dave Goodell <goodell(a)mcs.anl.gov> wrote: >> On Apr 12, 2013, at 4:30 PM CDT, Ali Behjatian <ali.behjatian(a)gmail.com> wrote: >> >>> I tried to follow the instructions in the MPICH2 Installer's Guide but >>> I received an error after running "make 2>&1 | tee m.txt". I appreciate >>> if you help me to fix this problem. >> >> Try adding "--without-blcr" on your configure line. It looks like hydra, our configure tests, and your BLCR installation don't agree on something. Ideally we would/will fix the configure test, though this is the easiest way for you to get a working MPICH. >> >> -Dave >> >> _______________________________________________ >> discuss mailing list discuss(a)mpich.org >> To manage subscription options or unsubscribe: >> https://lists.mpich.org/mailman/listinfo/discuss >> >> <c.txt><m.txt>_______________________________________________ >> discuss mailing list discuss(a)mpich.org >> To manage subscription options or unsubscribe: >> https://lists.mpich.org/mailman/listinfo/discuss > > _______________________________________________ > discuss mailing list discuss(a)mpich.org > To manage subscription options or unsubscribe: > https://lists.mpich.org/mailman/listinfo/discuss > -- Pavan Balaji http://www.mcs.anl.gov/~balaji

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Re: [mpich-discuss] Problem in Building MPICH
by Dave Goodell 12 Apr '13

12 Apr '13

Sorry, looks like I gave you the wrong configure option. Try "--without-hydra-ckpointlib". -Dave On Apr 12, 2013, at 5:19 PM CDT, Ali Behjatian <ali.behjatian(a)gmail.com> wrote: > I think I got the same error again. > > Thanks > Ali > > > On Fri, Apr 12, 2013 at 4:37 PM, Dave Goodell <goodell(a)mcs.anl.gov> wrote: > On Apr 12, 2013, at 4:30 PM CDT, Ali Behjatian <ali.behjatian(a)gmail.com> wrote: > > > I tried to follow the instructions in the MPICH2 Installer's Guide but > > I received an error after running "make 2>&1 | tee m.txt". I appreciate > > if you help me to fix this problem. > > Try adding "--without-blcr" on your configure line. It looks like hydra, our configure tests, and your BLCR installation don't agree on something. Ideally we would/will fix the configure test, though this is the easiest way for you to get a working MPICH. > > -Dave > > _______________________________________________ > discuss mailing list discuss(a)mpich.org > To manage subscription options or unsubscribe: > https://lists.mpich.org/mailman/listinfo/discuss > > <c.txt><m.txt>_______________________________________________ > discuss mailing list discuss(a)mpich.org > To manage subscription options or unsubscribe: > https://lists.mpich.org/mailman/listinfo/discuss

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Re: [mpich-discuss] Problem in Building MPICH
by Ali Behjatian 12 Apr '13

12 Apr '13

I think I got the same error again. Thanks Ali On Fri, Apr 12, 2013 at 4:37 PM, Dave Goodell <goodell(a)mcs.anl.gov> wrote: > On Apr 12, 2013, at 4:30 PM CDT, Ali Behjatian <ali.behjatian(a)gmail.com> > wrote: > > > I tried to follow the instructions in the MPICH2 Installer's Guide but > > I received an error after running "make 2>&1 | tee m.txt". I appreciate > > if you help me to fix this problem. > > Try adding "--without-blcr" on your configure line. It looks like hydra, > our configure tests, and your BLCR installation don't agree on something. > Ideally we would/will fix the configure test, though this is the easiest > way for you to get a working MPICH. > > -Dave > > _______________________________________________ > discuss mailing list discuss(a)mpich.org > To manage subscription options or unsubscribe: > https://lists.mpich.org/mailman/listinfo/discuss >

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Re: [mpich-discuss] Problem in Building MPICH
by Dave Goodell 12 Apr '13

12 Apr '13

On Apr 12, 2013, at 4:30 PM CDT, Ali Behjatian <ali.behjatian(a)gmail.com> wrote: > I tried to follow the instructions in the MPICH2 Installer's Guide but > I received an error after running "make 2>&1 | tee m.txt". I appreciate > if you help me to fix this problem. Try adding "--without-blcr" on your configure line. It looks like hydra, our configure tests, and your BLCR installation don't agree on something. Ideally we would/will fix the configure test, though this is the easiest way for you to get a working MPICH. -Dave

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Fwd: Problem in Building MPICH
by Ali Behjatian 12 Apr '13

12 Apr '13

Hi, I tried to follow the instructions in the MPICH2 Installer's Guide but I received an error after running "make 2>&1 | tee m.txt". I appreciate if you help me to fix this problem. Thanks Ali

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Re: [mpich-discuss] Merging stdout from multiple ranks
by Pavan Balaji 12 Apr '13

12 Apr '13

On 04/12/2013 11:48 AM US Central Time, Rob Latham wrote: > On Tue, Apr 09, 2013 at 09:57:12AM -0500, Pavan Balaji wrote: >> Not when everything is dumped to the same output from mpiexec (e.g., >> stdout), since that'll require an arbitrary amount of buffering at >> mpiexec to do that. You could redirect the output to separate per-rank >> files. mpiexec -help should give you information on that. > > Oh man how did I not know that? What is the correct > '-outfile-pattern' to use? the -help doesn't tell you anything > about the "pattern language" You can get more information on that: % mpiexec -outfile-pattern -help -- Pavan -- Pavan Balaji http://www.mcs.anl.gov/~balaji

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Re: [mpich-discuss] Merging stdout from multiple ranks
by Rob Latham 12 Apr '13

12 Apr '13

On Tue, Apr 09, 2013 at 09:57:12AM -0500, Pavan Balaji wrote: > Not when everything is dumped to the same output from mpiexec (e.g., > stdout), since that'll require an arbitrary amount of buffering at > mpiexec to do that. You could redirect the output to separate per-rank > files. mpiexec -help should give you information on that. Oh man how did I not know that? What is the correct '-outfile-pattern' to use? the -help doesn't tell you anything about the "pattern language" ==rob -- Rob Latham Mathematics and Computer Science Division Argonne National Lab, IL USA

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Re: [mpich-discuss] mpich-3.0.3 ARMCI compile warnings
by Jim Dinan 09 Apr '13

09 Apr '13

Hi Jeff, Thanks for the bug report. I created a ticket for this; should be an easy fix. https://trac.mpich.org/projects/mpich/ticket/1807 ~Jim. On 04/09/2013 06:09 PM, Daily, Jeff A wrote: > On NERSCï¿½s hopper I get the following warnings when compiling the ARMCI > sources using the default module environment. > > > > CC parmci.lo > > PGC-W-0119-void function ARMCI_Barrier cannot return value > (../mpich-3.0.3/src/armci/src/parmci.c: 52) > > PGC-W-0119-void function ARMCI_Fence cannot return value > (../mpich-3.0.3/src/armci/src/parmci.c: 57) > > PGC-W-0119-void function ARMCI_AllFence cannot return value > (../mpich-3.0.3/src/armci/src/parmci.c: 62) > > PGC-W-0119-void function ARMCI_Access_begin cannot return value > (../mpich-3.0.3/src/armci/src/parmci.c: 67) > > PGC-W-0119-void function ARMCI_Access_end cannot return value > (../mpich-3.0.3/src/armci/src/parmci.c: 72) > > PGC-W-0119-void function ARMCI_Lock cannot return value > (../mpich-3.0.3/src/armci/src/parmci.c: 262) > > PGC-W-0119-void function ARMCI_Unlock cannot return value > (../mpich-3.0.3/src/armci/src/parmci.c: 267) > > PGC-W-0119-void function armci_msg_barrier cannot return value > (../mpich-3.0.3/src/armci/src/parmci.c: 277) > > PGC-W-0119-void function armci_msg_group_barrier cannot return value > (../mpich-3.0.3/src/armci/src/parmci.c: 282) > > PGC/x86-64 Linux 12.9-0: compilation completed with warnings > > > > Looks like the when the profiling interface was generated, all functions > were assumed to return a value. I hope itï¿½s an easy fix. >

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mpich-3.0.3 ARMCI compile warnings
by Daily, Jeff A 09 Apr '13

09 Apr '13

MPICH Team, On NERSC's hopper I get the following warnings when compiling the ARMCI sources using the default module environment. CC parmci.lo PGC-W-0119-void function ARMCI_Barrier cannot return value (../mpich-3.0.3/src/armci/src/parmci.c: 52) PGC-W-0119-void function ARMCI_Fence cannot return value (../mpich-3.0.3/src/armci/src/parmci.c: 57) PGC-W-0119-void function ARMCI_AllFence cannot return value (../mpich-3.0.3/src/armci/src/parmci.c: 62) PGC-W-0119-void function ARMCI_Access_begin cannot return value (../mpich-3.0.3/src/armci/src/parmci.c: 67) PGC-W-0119-void function ARMCI_Access_end cannot return value (../mpich-3.0.3/src/armci/src/parmci.c: 72) PGC-W-0119-void function ARMCI_Lock cannot return value (../mpich-3.0.3/src/armci/src/parmci.c: 262) PGC-W-0119-void function ARMCI_Unlock cannot return value (../mpich-3.0.3/src/armci/src/parmci.c: 267) PGC-W-0119-void function armci_msg_barrier cannot return value (../mpich-3.0.3/src/armci/src/parmci.c: 277) PGC-W-0119-void function armci_msg_group_barrier cannot return value (../mpich-3.0.3/src/armci/src/parmci.c: 282) PGC/x86-64 Linux 12.9-0: compilation completed with warnings Looks like the when the profiling interface was generated, all functions were assumed to return a value. I hope it's an easy fix. __________________________________________________ Jeff Daily Scientist Data Intensive Scientific Computing Pacific Northwest National Laboratory 902 Battelle Boulevard P.O. Box 999, MSIN K7-90 Richland, WA 99352 USA Tel: 509-372-6548 Fax: 509-372-4720 jeff.daily(a)pnnl.gov www.pnnl.gov

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