June 2018 - discuss - mailman3.cels.anl.gov

Re: [mpich-discuss] MPICH 3.2.1 build error with icc+ifort: undefined reference to `_Static_assert'
by Gus Correa 13 Jun '18

13 Jun '18

On 06/13/2018 07:36 PM, Jeff Hammond wrote: > Why don't you just use a newer ICC? September 28, 2012 was a long time > ago... > > Jeff The cost of a new license. :( > > On Wed, Jun 13, 2018 at 4:32 PM, Gus Correa <gus(a)ldeo.columbia.edu > <mailto:[email protected]>> wrote: > > Thank you Jeff and Min! > > Would you know if MPICH 3.2 has the same issue? > I would rather use an older version instead, as long as it builds. > > Many thanks, > Gus Correa > > On 06/13/2018 06:34 PM, Min Si wrote: > > I was just creating the issue on MPICH github when Jeff replied. > > Please use this issue to keep track: > https://github.com/pmodels/mpich/issues/3178 > <https://github.com/pmodels/mpich/issues/3178> > > Min > On 2018/06/13 15:19, Jeff Hammond wrote: > > _Static_assert comes from C11. > > src/include/mpir_assert.h does a direct test for C11 support > based upon the GCC version, which is unsafe since ICC (and > other non-GCC compilers) define these macros. > > /* GCC 4.6 added support for _Static_assert: > * http://gcc.gnu.org/gcc-4.6/changes.html > <http://gcc.gnu.org/gcc-4.6/changes.html> */ > #if (__GNUC__ > 4 || (__GNUC__ == 4 && __GNUC_MINOR__ >= 6)) > && !defined __cplusplus > #define HAVE_C11__STATIC_ASSERT 1 > #endif > > MPICH needs to test for _Static_assert properly using > configure. You should file a GitHub issue to track this. > > Jeff > > On Wed, Jun 13, 2018 at 2:33 PM, Gus Correa > <gus(a)ldeo.columbia.edu <mailto:[email protected]> > <mailto:[email protected] > <mailto:[email protected]>>> wrote: > > Hi MPICH experts > > I am trying to build MPICH 3.2.1 with Intel > compilers (icc, ifort). > C++ is disabled. > > The configuration step goes well, > but make fails, > after a lot of stuff is compiled, > with the error below (undefined reference to > `_Static_assert'). > > FYI, the OS is Linux Fedora Core 26: > > Linux 4.15.17-200.fc26.x86_64 #1 SMP Thu Apr 12 > 18:28:26 UTC 2018 > x86_64 x86_64 GNU/Linux > > The Intel compiler version is 12.1.6: > ifort (IFORT) 12.1.6 20120928 > icc (ICC) 12.1.6 20120928 > > The Intel compiler environment is set the standard way > recommended by Intel: > > source /path/to/intel/bin/compilervars.sh intel64 > > > Any help is appreciated. > Gus Correa > > ****** make errror message > ************************************* > make[2]: Entering directory > > '/home/sw/mpich/inst/3.2.1/mpich-3.2.1/build_intel-2011.13.367' > CCLD src/env/mpivars > lib/.libs/libmpi.a(lib_libmpi_la-ch3_progress.o): In > function > `MPIDI_CH3I_Shm_send_progress': > > ../src/mpid/ch3/channels/nemesis/src/ch3_progress.c:(.text+0x1ea2): > undefined > reference to `_Static_assert' > lib/.libs/libmpi.a(lib_libmpi_la-ch3i_eagernoncontig.o): In > function `MPIDI_CH3I_SendNoncontig': > > ../src/mpid/ch3/channels/nemesis/src/ch3i_eagernoncontig.c:(.text+0x1d3): > undefined reference to `_Static_assert' > make[2]: *** [Makefile:19701: src/env/mpivars] Error 1 > make[2]: Leaving directory > > '/home/sw/mpich/inst/3.2.1/mpich-3.2.1/build_intel-2011.13.367' > make[1]: *** [Makefile:38608: all-recursive] Error 1 > make[1]: Leaving directory > > '/home/sw/mpich/inst/3.2.1/mpich-3.2.1/build_intel-2011.13.367' > make: *** [Makefile:10337: all] Error 2 > > ******************************************************************* > > _______________________________________________ > discuss mailing list discuss(a)mpich.org > <mailto:[email protected]> <mailto:[email protected] > <mailto:[email protected]>> > To manage subscription options or unsubscribe: > https://lists.mpich.org/mailman/listinfo/discuss > <https://lists.mpich.org/mailman/listinfo/discuss> > <https://lists.mpich.org/mailman/listinfo/discuss > <https://lists.mpich.org/mailman/listinfo/discuss>> > > > > > -- > Jeff Hammond > jeff.science(a)gmail.com <mailto:[email protected]> > <mailto:[email protected] <mailto:[email protected]>> > http://jeffhammond.github.io/ > > > _______________________________________________ > discuss mailing listdiscuss(a)mpich.org > <mailto:[email protected]> > To manage subscription options or unsubscribe: > https://lists.mpich.org/mailman/listinfo/discuss > <https://lists.mpich.org/mailman/listinfo/discuss> > > > > > _______________________________________________ > discuss mailing list discuss(a)mpich.org <mailto:[email protected]> > To manage subscription options or unsubscribe: > https://lists.mpich.org/mailman/listinfo/discuss > <https://lists.mpich.org/mailman/listinfo/discuss> > > > _______________________________________________ > discuss mailing list discuss(a)mpich.org <mailto:[email protected]> > To manage subscription options or unsubscribe: > https://lists.mpich.org/mailman/listinfo/discuss > <https://lists.mpich.org/mailman/listinfo/discuss> > > > > > -- > Jeff Hammond > jeff.science(a)gmail.com <mailto:[email protected]> > http://jeffhammond.github.io/ > > > _______________________________________________ > discuss mailing list discuss(a)mpich.org > To manage subscription options or unsubscribe: > https://lists.mpich.org/mailman/listinfo/discuss > _______________________________________________ discuss mailing list discuss(a)mpich.org To manage subscription options or unsubscribe: https://lists.mpich.org/mailman/listinfo/discuss

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Re: [mpich-discuss] MPICH 3.2.1 build error with icc+ifort: undefined reference to `_Static_assert'
by Jeff Hammond 13 Jun '18

13 Jun '18

You can also just #define HAVE_C11__STATIC_ASSERT 0 in the aforementioned header file to override the bad preprocessor test. On Wed, Jun 13, 2018 at 4:36 PM, Jeff Hammond <jeff.science(a)gmail.com> wrote: > Why don't you just use a newer ICC? September 28, 2012 was a long time > ago... > > Jeff > > On Wed, Jun 13, 2018 at 4:32 PM, Gus Correa <gus(a)ldeo.columbia.edu> wrote: > >> Thank you Jeff and Min! >> >> Would you know if MPICH 3.2 has the same issue? >> I would rather use an older version instead, as long as it builds. >> >> Many thanks, >> Gus Correa >> >> On 06/13/2018 06:34 PM, Min Si wrote: >> >>> I was just creating the issue on MPICH github when Jeff replied. >>> >>> Please use this issue to keep track: >>> https://github.com/pmodels/mpich/issues/3178 >>> >>> Min >>> On 2018/06/13 15:19, Jeff Hammond wrote: >>> >>>> _Static_assert comes from C11. >>>> >>>> src/include/mpir_assert.h does a direct test for C11 support based upon >>>> the GCC version, which is unsafe since ICC (and other non-GCC compilers) >>>> define these macros. >>>> >>>> /* GCC 4.6 added support for _Static_assert: >>>> * http://gcc.gnu.org/gcc-4.6/changes.html */ >>>> #if (__GNUC__ > 4 || (__GNUC__ == 4 && __GNUC_MINOR__ >= 6)) && >>>> !defined __cplusplus >>>> #define HAVE_C11__STATIC_ASSERT 1 >>>> #endif >>>> >>>> MPICH needs to test for _Static_assert properly using configure. You >>>> should file a GitHub issue to track this. >>>> >>>> Jeff >>>> >>>> On Wed, Jun 13, 2018 at 2:33 PM, Gus Correa <gus(a)ldeo.columbia.edu >>>> <mailto:[email protected]>> wrote: >>>> >>>> Hi MPICH experts >>>> >>>> I am trying to build MPICH 3.2.1 with Intel >>>> compilers (icc, ifort). >>>> C++ is disabled. >>>> >>>> The configuration step goes well, >>>> but make fails, >>>> after a lot of stuff is compiled, >>>> with the error below (undefined reference to `_Static_assert'). >>>> >>>> FYI, the OS is Linux Fedora Core 26: >>>> >>>> Linux 4.15.17-200.fc26.x86_64 #1 SMP Thu Apr 12 18:28:26 UTC 2018 >>>> x86_64 x86_64 GNU/Linux >>>> >>>> The Intel compiler version is 12.1.6: >>>> ifort (IFORT) 12.1.6 20120928 >>>> icc (ICC) 12.1.6 20120928 >>>> >>>> The Intel compiler environment is set the standard way >>>> recommended by Intel: >>>> >>>> source /path/to/intel/bin/compilervars.sh intel64 >>>> >>>> >>>> Any help is appreciated. >>>> Gus Correa >>>> >>>> ****** make errror message ************************************* >>>> make[2]: Entering directory >>>> '/home/sw/mpich/inst/3.2.1/mpich-3.2.1/build_intel-2011.13.367' >>>> CCLD src/env/mpivars >>>> lib/.libs/libmpi.a(lib_libmpi_la-ch3_progress.o): In function >>>> `MPIDI_CH3I_Shm_send_progress': >>>> ../src/mpid/ch3/channels/nemesis/src/ch3_progress.c:(.text+0x1ea2): >>>> undefined >>>> reference to `_Static_assert' >>>> lib/.libs/libmpi.a(lib_libmpi_la-ch3i_eagernoncontig.o): In >>>> function `MPIDI_CH3I_SendNoncontig': >>>> ../src/mpid/ch3/channels/nemesis/src/ch3i_eagernoncontig.c:( >>>> .text+0x1d3): >>>> undefined reference to `_Static_assert' >>>> make[2]: *** [Makefile:19701: src/env/mpivars] Error 1 >>>> make[2]: Leaving directory >>>> '/home/sw/mpich/inst/3.2.1/mpich-3.2.1/build_intel-2011.13.367' >>>> make[1]: *** [Makefile:38608: all-recursive] Error 1 >>>> make[1]: Leaving directory >>>> '/home/sw/mpich/inst/3.2.1/mpich-3.2.1/build_intel-2011.13.367' >>>> make: *** [Makefile:10337: all] Error 2 >>>> ******************************************************************* >>>> >>>> _______________________________________________ >>>> discuss mailing list discuss(a)mpich.org <mailto:[email protected]> >>>> To manage subscription options or unsubscribe: >>>> https://lists.mpich.org/mailman/listinfo/discuss >>>> <https://lists.mpich.org/mailman/listinfo/discuss> >>>> >>>> >>>> >>>> >>>> -- >>>> Jeff Hammond >>>> jeff.science(a)gmail.com <mailto:[email protected]> >>>> http://jeffhammond.github.io/ >>>> >>>> >>>> _______________________________________________ >>>> discuss mailing listdiscuss(a)mpich.org >>>> To manage subscription options or unsubscribe: >>>> https://lists.mpich.org/mailman/listinfo/discuss >>>> >>> >>> >>> >>> _______________________________________________ >>> discuss mailing list discuss(a)mpich.org >>> To manage subscription options or unsubscribe: >>> https://lists.mpich.org/mailman/listinfo/discuss >>> >>> >> _______________________________________________ >> discuss mailing list discuss(a)mpich.org >> To manage subscription options or unsubscribe: >> https://lists.mpich.org/mailman/listinfo/discuss >> > > > > -- > Jeff Hammond > jeff.science(a)gmail.com > http://jeffhammond.github.io/ > -- Jeff Hammond jeff.science(a)gmail.com http://jeffhammond.github.io/ _______________________________________________ discuss mailing list discuss(a)mpich.org To manage subscription options or unsubscribe: https://lists.mpich.org/mailman/listinfo/discuss

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Re: [mpich-discuss] MPICH 3.2.1 build error with icc+ifort: undefined reference to `_Static_assert'
by Jeff Hammond 13 Jun '18

13 Jun '18

Why don't you just use a newer ICC? September 28, 2012 was a long time ago... Jeff On Wed, Jun 13, 2018 at 4:32 PM, Gus Correa <gus(a)ldeo.columbia.edu> wrote: > Thank you Jeff and Min! > > Would you know if MPICH 3.2 has the same issue? > I would rather use an older version instead, as long as it builds. > > Many thanks, > Gus Correa > > On 06/13/2018 06:34 PM, Min Si wrote: > >> I was just creating the issue on MPICH github when Jeff replied. >> >> Please use this issue to keep track: >> https://github.com/pmodels/mpich/issues/3178 >> >> Min >> On 2018/06/13 15:19, Jeff Hammond wrote: >> >>> _Static_assert comes from C11. >>> >>> src/include/mpir_assert.h does a direct test for C11 support based upon >>> the GCC version, which is unsafe since ICC (and other non-GCC compilers) >>> define these macros. >>> >>> /* GCC 4.6 added support for _Static_assert: >>> * http://gcc.gnu.org/gcc-4.6/changes.html */ >>> #if (__GNUC__ > 4 || (__GNUC__ == 4 && __GNUC_MINOR__ >= 6)) && !defined >>> __cplusplus >>> #define HAVE_C11__STATIC_ASSERT 1 >>> #endif >>> >>> MPICH needs to test for _Static_assert properly using configure. You >>> should file a GitHub issue to track this. >>> >>> Jeff >>> >>> On Wed, Jun 13, 2018 at 2:33 PM, Gus Correa <gus(a)ldeo.columbia.edu >>> <mailto:[email protected]>> wrote: >>> >>> Hi MPICH experts >>> >>> I am trying to build MPICH 3.2.1 with Intel >>> compilers (icc, ifort). >>> C++ is disabled. >>> >>> The configuration step goes well, >>> but make fails, >>> after a lot of stuff is compiled, >>> with the error below (undefined reference to `_Static_assert'). >>> >>> FYI, the OS is Linux Fedora Core 26: >>> >>> Linux 4.15.17-200.fc26.x86_64 #1 SMP Thu Apr 12 18:28:26 UTC 2018 >>> x86_64 x86_64 GNU/Linux >>> >>> The Intel compiler version is 12.1.6: >>> ifort (IFORT) 12.1.6 20120928 >>> icc (ICC) 12.1.6 20120928 >>> >>> The Intel compiler environment is set the standard way >>> recommended by Intel: >>> >>> source /path/to/intel/bin/compilervars.sh intel64 >>> >>> >>> Any help is appreciated. >>> Gus Correa >>> >>> ****** make errror message ************************************* >>> make[2]: Entering directory >>> '/home/sw/mpich/inst/3.2.1/mpich-3.2.1/build_intel-2011.13.367' >>> CCLD src/env/mpivars >>> lib/.libs/libmpi.a(lib_libmpi_la-ch3_progress.o): In function >>> `MPIDI_CH3I_Shm_send_progress': >>> ../src/mpid/ch3/channels/nemesis/src/ch3_progress.c:(.text+0x1ea2): >>> undefined >>> reference to `_Static_assert' >>> lib/.libs/libmpi.a(lib_libmpi_la-ch3i_eagernoncontig.o): In >>> function `MPIDI_CH3I_SendNoncontig': >>> ../src/mpid/ch3/channels/nemesis/src/ch3i_eagernoncontig.c:( >>> .text+0x1d3): >>> undefined reference to `_Static_assert' >>> make[2]: *** [Makefile:19701: src/env/mpivars] Error 1 >>> make[2]: Leaving directory >>> '/home/sw/mpich/inst/3.2.1/mpich-3.2.1/build_intel-2011.13.367' >>> make[1]: *** [Makefile:38608: all-recursive] Error 1 >>> make[1]: Leaving directory >>> '/home/sw/mpich/inst/3.2.1/mpich-3.2.1/build_intel-2011.13.367' >>> make: *** [Makefile:10337: all] Error 2 >>> ******************************************************************* >>> >>> _______________________________________________ >>> discuss mailing list discuss(a)mpich.org <mailto:[email protected]> >>> To manage subscription options or unsubscribe: >>> https://lists.mpich.org/mailman/listinfo/discuss >>> <https://lists.mpich.org/mailman/listinfo/discuss> >>> >>> >>> >>> >>> -- >>> Jeff Hammond >>> jeff.science(a)gmail.com <mailto:[email protected]> >>> http://jeffhammond.github.io/ >>> >>> >>> _______________________________________________ >>> discuss mailing listdiscuss(a)mpich.org >>> To manage subscription options or unsubscribe: >>> https://lists.mpich.org/mailman/listinfo/discuss >>> >> >> >> >> _______________________________________________ >> discuss mailing list discuss(a)mpich.org >> To manage subscription options or unsubscribe: >> https://lists.mpich.org/mailman/listinfo/discuss >> >> > _______________________________________________ > discuss mailing list discuss(a)mpich.org > To manage subscription options or unsubscribe: > https://lists.mpich.org/mailman/listinfo/discuss > -- Jeff Hammond jeff.science(a)gmail.com http://jeffhammond.github.io/ _______________________________________________ discuss mailing list discuss(a)mpich.org To manage subscription options or unsubscribe: https://lists.mpich.org/mailman/listinfo/discuss

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Re: [mpich-discuss] MPICH 3.2.1 build error with icc+ifort: undefined reference to `_Static_assert'
by Gus Correa 13 Jun '18

13 Jun '18

Thank you Jeff and Min! Would you know if MPICH 3.2 has the same issue? I would rather use an older version instead, as long as it builds. Many thanks, Gus Correa On 06/13/2018 06:34 PM, Min Si wrote: > I was just creating the issue on MPICH github when Jeff replied. > > Please use this issue to keep track: > https://github.com/pmodels/mpich/issues/3178 > > Min > On 2018/06/13 15:19, Jeff Hammond wrote: >> _Static_assert comes from C11. >> >> src/include/mpir_assert.h does a direct test for C11 support based >> upon the GCC version, which is unsafe since ICC (and other non-GCC >> compilers) define these macros. >> >> /* GCC 4.6 added support for _Static_assert: >> * http://gcc.gnu.org/gcc-4.6/changes.html */ >> #if (__GNUC__ > 4 || (__GNUC__ == 4 && __GNUC_MINOR__ >= 6)) && >> !defined __cplusplus >> #define HAVE_C11__STATIC_ASSERT 1 >> #endif >> >> MPICH needs to test for _Static_assert properly using configure. You >> should file a GitHub issue to track this. >> >> Jeff >> >> On Wed, Jun 13, 2018 at 2:33 PM, Gus Correa <gus(a)ldeo.columbia.edu >> <mailto:[email protected]>> wrote: >> >> Hi MPICH experts >> >> I am trying to build MPICH 3.2.1 with Intel >> compilers (icc, ifort). >> C++ is disabled. >> >> The configuration step goes well, >> but make fails, >> after a lot of stuff is compiled, >> with the error below (undefined reference to `_Static_assert'). >> >> FYI, the OS is Linux Fedora Core 26: >> >> Linux 4.15.17-200.fc26.x86_64 #1 SMP Thu Apr 12 18:28:26 UTC 2018 >> x86_64 x86_64 GNU/Linux >> >> The Intel compiler version is 12.1.6: >> ifort (IFORT) 12.1.6 20120928 >> icc (ICC) 12.1.6 20120928 >> >> The Intel compiler environment is set the standard way >> recommended by Intel: >> >> source /path/to/intel/bin/compilervars.sh intel64 >> >> >> Any help is appreciated. >> Gus Correa >> >> ****** make errror message ************************************* >> make[2]: Entering directory >> '/home/sw/mpich/inst/3.2.1/mpich-3.2.1/build_intel-2011.13.367' >> CCLD src/env/mpivars >> lib/.libs/libmpi.a(lib_libmpi_la-ch3_progress.o): In function >> `MPIDI_CH3I_Shm_send_progress': >> ../src/mpid/ch3/channels/nemesis/src/ch3_progress.c:(.text+0x1ea2): undefined >> reference to `_Static_assert' >> lib/.libs/libmpi.a(lib_libmpi_la-ch3i_eagernoncontig.o): In >> function `MPIDI_CH3I_SendNoncontig': >> ../src/mpid/ch3/channels/nemesis/src/ch3i_eagernoncontig.c:(.text+0x1d3): >> undefined reference to `_Static_assert' >> make[2]: *** [Makefile:19701: src/env/mpivars] Error 1 >> make[2]: Leaving directory >> '/home/sw/mpich/inst/3.2.1/mpich-3.2.1/build_intel-2011.13.367' >> make[1]: *** [Makefile:38608: all-recursive] Error 1 >> make[1]: Leaving directory >> '/home/sw/mpich/inst/3.2.1/mpich-3.2.1/build_intel-2011.13.367' >> make: *** [Makefile:10337: all] Error 2 >> ******************************************************************* >> >> _______________________________________________ >> discuss mailing list discuss(a)mpich.org <mailto:[email protected]> >> To manage subscription options or unsubscribe: >> https://lists.mpich.org/mailman/listinfo/discuss >> <https://lists.mpich.org/mailman/listinfo/discuss> >> >> >> >> >> -- >> Jeff Hammond >> jeff.science(a)gmail.com <mailto:[email protected]> >> http://jeffhammond.github.io/ >> >> >> _______________________________________________ >> discuss mailing listdiscuss(a)mpich.org >> To manage subscription options or unsubscribe: >> https://lists.mpich.org/mailman/listinfo/discuss > > > > _______________________________________________ > discuss mailing list discuss(a)mpich.org > To manage subscription options or unsubscribe: > https://lists.mpich.org/mailman/listinfo/discuss > _______________________________________________ discuss mailing list discuss(a)mpich.org To manage subscription options or unsubscribe: https://lists.mpich.org/mailman/listinfo/discuss

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Re: [mpich-discuss] MPICH 3.2.1 build error with icc+ifort: undefined reference to `_Static_assert'
by Min Si 13 Jun '18

13 Jun '18

I was just creating the issue on MPICH github when Jeff replied. Please use this issue to keep track: https://github.com/pmodels/mpich/issues/3178 Min On 2018/06/13 15:19, Jeff Hammond wrote: > _Static_assert comes from C11. > > src/include/mpir_assert.h does a direct test for C11 support based > upon the GCC version, which is unsafe since ICC (and other non-GCC > compilers) define these macros. > > /* GCC 4.6 added support for _Static_assert: > * http://gcc.gnu.org/gcc-4.6/changes.html */ > #if (__GNUC__ > 4 || (__GNUC__ == 4 && __GNUC_MINOR__ >= 6)) && > !defined __cplusplus > #define HAVE_C11__STATIC_ASSERT 1 > #endif > > MPICH needs to test for _Static_assert properly using configure. You > should file a GitHub issue to track this. > > Jeff > > On Wed, Jun 13, 2018 at 2:33 PM, Gus Correa <gus(a)ldeo.columbia.edu > <mailto:[email protected]>> wrote: > > Hi MPICH experts > > I am trying to build MPICH 3.2.1 with Intel > compilers (icc, ifort). > C++ is disabled. > > The configuration step goes well, > but make fails, > after a lot of stuff is compiled, > with the error below (undefined reference to `_Static_assert'). > > FYI, the OS is Linux Fedora Core 26: > > Linux 4.15.17-200.fc26.x86_64 #1 SMP Thu Apr 12 18:28:26 UTC 2018 > x86_64 x86_64 GNU/Linux > > The Intel compiler version is 12.1.6: > ifort (IFORT) 12.1.6 20120928 > icc (ICC) 12.1.6 20120928 > > The Intel compiler environment is set the standard way > recommended by Intel: > > source /path/to/intel/bin/compilervars.sh intel64 > > > Any help is appreciated. > Gus Correa > > ****** make errror message ************************************* > make[2]: Entering directory > '/home/sw/mpich/inst/3.2.1/mpich-3.2.1/build_intel-2011.13.367' > CCLD src/env/mpivars > lib/.libs/libmpi.a(lib_libmpi_la-ch3_progress.o): In function > `MPIDI_CH3I_Shm_send_progress': > ../src/mpid/ch3/channels/nemesis/src/ch3_progress.c:(.text+0x1ea2): > undefined reference to `_Static_assert' > lib/.libs/libmpi.a(lib_libmpi_la-ch3i_eagernoncontig.o): In > function `MPIDI_CH3I_SendNoncontig': > ../src/mpid/ch3/channels/nemesis/src/ch3i_eagernoncontig.c:(.text+0x1d3): > undefined reference to `_Static_assert' > make[2]: *** [Makefile:19701: src/env/mpivars] Error 1 > make[2]: Leaving directory > '/home/sw/mpich/inst/3.2.1/mpich-3.2.1/build_intel-2011.13.367' > make[1]: *** [Makefile:38608: all-recursive] Error 1 > make[1]: Leaving directory > '/home/sw/mpich/inst/3.2.1/mpich-3.2.1/build_intel-2011.13.367' > make: *** [Makefile:10337: all] Error 2 > ******************************************************************* > > _______________________________________________ > discuss mailing list discuss(a)mpich.org <mailto:[email protected]> > To manage subscription options or unsubscribe: > https://lists.mpich.org/mailman/listinfo/discuss > <https://lists.mpich.org/mailman/listinfo/discuss> > > > > > -- > Jeff Hammond > jeff.science(a)gmail.com <mailto:[email protected]> > http://jeffhammond.github.io/ > > > _______________________________________________ > discuss mailing list discuss(a)mpich.org > To manage subscription options or unsubscribe: > https://lists.mpich.org/mailman/listinfo/discuss _______________________________________________ discuss mailing list discuss(a)mpich.org To manage subscription options or unsubscribe: https://lists.mpich.org/mailman/listinfo/discuss

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Re: [mpich-discuss] MPICH 3.2.1 build error with icc+ifort: undefined reference to `_Static_assert'
by Jeff Hammond 13 Jun '18

13 Jun '18

_Static_assert comes from C11. src/include/mpir_assert.h does a direct test for C11 support based upon the GCC version, which is unsafe since ICC (and other non-GCC compilers) define these macros. /* GCC 4.6 added support for _Static_assert: * http://gcc.gnu.org/gcc-4.6/changes.html */ #if (__GNUC__ > 4 || (__GNUC__ == 4 && __GNUC_MINOR__ >= 6)) && !defined __cplusplus #define HAVE_C11__STATIC_ASSERT 1 #endif MPICH needs to test for _Static_assert properly using configure. You should file a GitHub issue to track this. Jeff On Wed, Jun 13, 2018 at 2:33 PM, Gus Correa <gus(a)ldeo.columbia.edu> wrote: > Hi MPICH experts > > I am trying to build MPICH 3.2.1 with Intel > compilers (icc, ifort). > C++ is disabled. > > The configuration step goes well, > but make fails, > after a lot of stuff is compiled, > with the error below (undefined reference to `_Static_assert'). > > FYI, the OS is Linux Fedora Core 26: > > Linux 4.15.17-200.fc26.x86_64 #1 SMP Thu Apr 12 18:28:26 UTC 2018 x86_64 > x86_64 GNU/Linux > > The Intel compiler version is 12.1.6: > ifort (IFORT) 12.1.6 20120928 > icc (ICC) 12.1.6 20120928 > > The Intel compiler environment is set the standard way > recommended by Intel: > > source /path/to/intel/bin/compilervars.sh intel64 > > > Any help is appreciated. > Gus Correa > > ****** make errror message ************************************* > make[2]: Entering directory '/home/sw/mpich/inst/3.2.1/mpi > ch-3.2.1/build_intel-2011.13.367' > CCLD src/env/mpivars > lib/.libs/libmpi.a(lib_libmpi_la-ch3_progress.o): In function > `MPIDI_CH3I_Shm_send_progress': > ../src/mpid/ch3/channels/nemesis/src/ch3_progress.c:(.text+0x1ea2): > undefined reference to `_Static_assert' > lib/.libs/libmpi.a(lib_libmpi_la-ch3i_eagernoncontig.o): In function > `MPIDI_CH3I_SendNoncontig': > ../src/mpid/ch3/channels/nemesis/src/ch3i_eagernoncontig.c:(.text+0x1d3): > undefined reference to `_Static_assert' > make[2]: *** [Makefile:19701: src/env/mpivars] Error 1 > make[2]: Leaving directory '/home/sw/mpich/inst/3.2.1/mpi > ch-3.2.1/build_intel-2011.13.367' > make[1]: *** [Makefile:38608: all-recursive] Error 1 > make[1]: Leaving directory '/home/sw/mpich/inst/3.2.1/mpi > ch-3.2.1/build_intel-2011.13.367' > make: *** [Makefile:10337: all] Error 2 > ******************************************************************* > > _______________________________________________ > discuss mailing list discuss(a)mpich.org > To manage subscription options or unsubscribe: > https://lists.mpich.org/mailman/listinfo/discuss > -- Jeff Hammond jeff.science(a)gmail.com http://jeffhammond.github.io/ _______________________________________________ discuss mailing list discuss(a)mpich.org To manage subscription options or unsubscribe: https://lists.mpich.org/mailman/listinfo/discuss

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MPICH 3.2.1 build error with icc+ifort: undefined reference to `_Static_assert'
by Gus Correa 13 Jun '18

13 Jun '18

Hi MPICH experts I am trying to build MPICH 3.2.1 with Intel compilers (icc, ifort). C++ is disabled. The configuration step goes well, but make fails, after a lot of stuff is compiled, with the error below (undefined reference to `_Static_assert'). FYI, the OS is Linux Fedora Core 26: Linux 4.15.17-200.fc26.x86_64 #1 SMP Thu Apr 12 18:28:26 UTC 2018 x86_64 x86_64 GNU/Linux The Intel compiler version is 12.1.6: ifort (IFORT) 12.1.6 20120928 icc (ICC) 12.1.6 20120928 The Intel compiler environment is set the standard way recommended by Intel: source /path/to/intel/bin/compilervars.sh intel64 Any help is appreciated. Gus Correa ****** make errror message ************************************* make[2]: Entering directory '/home/sw/mpich/inst/3.2.1/mpich-3.2.1/build_intel-2011.13.367' CCLD src/env/mpivars lib/.libs/libmpi.a(lib_libmpi_la-ch3_progress.o): In function `MPIDI_CH3I_Shm_send_progress': ../src/mpid/ch3/channels/nemesis/src/ch3_progress.c:(.text+0x1ea2): undefined reference to `_Static_assert' lib/.libs/libmpi.a(lib_libmpi_la-ch3i_eagernoncontig.o): In function `MPIDI_CH3I_SendNoncontig': ../src/mpid/ch3/channels/nemesis/src/ch3i_eagernoncontig.c:(.text+0x1d3): undefined reference to `_Static_assert' make[2]: *** [Makefile:19701: src/env/mpivars] Error 1 make[2]: Leaving directory '/home/sw/mpich/inst/3.2.1/mpich-3.2.1/build_intel-2011.13.367' make[1]: *** [Makefile:38608: all-recursive] Error 1 make[1]: Leaving directory '/home/sw/mpich/inst/3.2.1/mpich-3.2.1/build_intel-2011.13.367' make: *** [Makefile:10337: all] Error 2 ******************************************************************* _______________________________________________ discuss mailing list discuss(a)mpich.org To manage subscription options or unsubscribe: https://lists.mpich.org/mailman/listinfo/discuss

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MPICH-3.2.1 crashes on MPI_BARRIER call
by Bill Petrick 13 Jun '18

13 Jun '18

Hi all, For the past 9 years I've been running MPICH-1.2.7 with the g95 fortran compiler. I just upgraded to MPICH-3.2.1 with a gfortran compiler. My first tests running on 2 nodes were fine. When I ran the program on 3 or more nodes it crashes at the first MPI_BARRIER call. As a test I ran the following "helloworld" program. It runs on all nodes just fine until I add the MPI_BARRIER statement. With the MPI_BARRIER statement it also runs fine on 2 nodes but crashes when run on 3 or more nodes. I execute with the following statement. mpiexec -f machines -launcher rsh –n 2 ./helloworld This program runs fine on all nodes without the MPI_BARRIER call but crashes on more than two nodes with the BARRIER call. ____________________________________________________ program main use mpi integer ( kind = 4 ) error integer ( kind = 4 ) id integer ( kind = 4 ) p real ( kind = 8 ) wtime ! Initialize MPI. call MPI_Init ( error ) ! Get the number of processes. call MPI_Comm_size ( MPI_COMM_WORLD, p, error ) ! Get the individual process ID. call MPI_Comm_rank ( MPI_COMM_WORLD, id, error ) call MPI_BARRIER(MPI_COMM_WORLD,error) ! ! Print a message. ! .................etc__________________________________________ However when I run it on 3 or more nodes it crashes at MPI_BARRIER with the following error message __________________________________________________________________________ iic@node0:/clusterfiles$ mpiexec -f machines -launcher rsh -n 3 ./helloworld Fatal error in PMPI_Barrier: Unknown error class, error stack: PMPI_Barrier(425)......: MPI_Barrier(MPI_COMM_WORLD) failed MPIR_Barrier_impl(332).: Failure during collective MPIR_Barrier_impl(327).: MPIR_Barrier(292)......: MPIR_Barrier_intra(180): Failure during collective Fatal error in PMPI_Barrier: Unknown error class, error stack: PMPI_Barrier(425)...............: MPI_Barrier(MPI_COMM_WORLD) failed MPIR_Barrier_impl(332)..........: Failure during collective MPIR_Barrier_impl(327)..........: MPIR_Barrier(292)...............: MPIR_Barrier_intra(169).........: MPID_nem_tcp_connpoll(1845).....: Communication error with rank 2: Connection refused MPIR_Barrier_intra(169).........: MPIDI_CH3U_Recvq_FDU_or_AEP(629): Communication error with rank 2 iic@node0:/clusterfiles$ ______________________________________________________ /etc/hosts is consistent across all nodes. /usr/bin/rsh exists on all nodes the "machines" file is the same on all nodes. Anyone have any ideas about what could be wrong? Thanks, Bill _______________________________________________ discuss mailing list discuss(a)mpich.org To manage subscription options or unsubscribe: https://lists.mpich.org/mailman/listinfo/discuss

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Re: [mpich-discuss] mpich-3.2.1 crash on call MPI_BARRIER
by Alexander Supalov 08 Jun '18

08 Jun '18

You’ve probably missed to attach the program. > 8 июня 2018 г., в 0:50, Bill Petrick <wpetrick(a)industrialimaging.com> написал(а): > > Hi All, This program runs fine on 2 cluster nodes but crashes with "MPI_BARRIER(mpi_comm_world_failed)" message when I try to run it on more nodes. I'm using mpif90 gfortran. Any ideas anyone? Thanks, Bill > > _______________________________________________ > discuss mailing list discuss(a)mpich.org > To manage subscription options or unsubscribe: > https://lists.mpich.org/mailman/listinfo/discuss _______________________________________________ discuss mailing list discuss(a)mpich.org To manage subscription options or unsubscribe: https://lists.mpich.org/mailman/listinfo/discuss

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mpich-3.2.1 crash on call MPI_BARRIER
by Bill Petrick 07 Jun '18

07 Jun '18

Hi All, This program runs fine on 2 cluster nodes but crashes with "MPI_BARRIER(mpi_comm_world_failed)" message when I try to run it on more nodes. I'm using mpif90 gfortran. Any ideas anyone? Thanks, Bill _______________________________________________ discuss mailing list discuss(a)mpich.org To manage subscription options or unsubscribe: https://lists.mpich.org/mailman/listinfo/discuss

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