October 2014 - discuss - mailman3.cels.anl.gov

Re: [mpich-discuss] Problem with RMA && MPI_Type_vector when stride value is relatively large (UPD)
by Victor Vysotskiy 16 Oct '14

16 Oct '14

Hi, I am sorry that the test bed code has not been attached to the original message. Enclosed please find it. I have also checked the issue in MPICH v3.1.3. Unfortunately, the latest MPICH3 version behaves exactly the same as the MPICH2 v1.5, i.e. it also hangs at "30000 2000". With best regards, Victor. P.s. Below is given an update on MPICH3 version used: MPICH2 Version: 3.1.3 MPICH2 Release date: Wed Oct 8 09:37:19 CDT 2014 MPICH2 Device: ch3:nemesis MPICH2 configure: --prefix=/opt/mpi/mpich3-1.3/ --disable-weak-symbols MPICH2 CC: gcc -O2 MPICH2 CXX: c++ -O2 MPICH2 F77: gfortran -O2 MPICH2 FC: gfortran -O2 GCC version 4.7.3 ________________________________ From: Victor Vysotskiy Sent: Thursday, October 16, 2014 1:34 PM To: discuss(a)mpich.org Subject: Problem with RMA && MPI_Type_vector when stride value is relatively large Hi, I am straggling with a simple MPI program when a vector derived datatype is used as origin/remote datatypes in the MPI_Put RMA operation. The underlying idea is quite simple: a contiguous piece of memory is interpreted as a 2D array and only its certain slice is going to be updated via MPI_Put. To this end, I am using a MPI_Type_vector call. Everything works fine when the stride value <= 24000, regardless count and blocklength. However, if stride is greater than 24000 then program simply hangs. The source code is attached and you can simply verify the issue by compiling and running it with the following parameters: mpicc mpi_tvec_rma.c mpirun -np 2 ./a.out 10000 2000 Ok mpirun -np 2 ./a.out 20000 2000 Ok mpirun -np 2 ./a.out 30000 2000 Hangs Is there any internal/known limits to the size of MPI_TYPE_VECTOR datatypes? So, I am really puzzled what is happening here and any help will be greatly appreciated! With best regards, Victor. P.S. The attached code is perfectly runs with the OpenMPI v1.8.2. P.P.S. Below are given some details about hardware and software setups used: MPICH2 Version: 1.5 MPICH2 Release date: Mon Oct 8 14:00:48 CDT 2012 MPICH2 Device: ch3:nemesis MPICH2 configure: --prefix=/opt/mpi/mpich2/ --disable-weak-symbols MPICH2 CC: gcc -O2 MPICH2 CXX: c++ -O2 MPICH2 F77: gfortran -O2 MPICH2 FC: gfortran -O2 GCC version 4.7.3 _______________________________________________ discuss mailing list discuss(a)mpich.org To manage subscription options or unsubscribe: https://lists.mpich.org/mailman/listinfo/discuss

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Re: [mpich-discuss] Problem with RMA && MPI_Type_vector when stride value is relatively large
by Junchao Zhang 16 Oct '14

16 Oct '14

Also, you should use the latest stable release MPICH-3.1.3 at http://www.mpich.org/downloads/ --Junchao Zhang On Thu, Oct 16, 2014 at 8:40 AM, Seo, Sangmin <sseo(a)anl.gov> wrote: > Hi Victor, > > Your code was not attached. Can you send it again? > > Thanks, > Sangmin > > > On Oct 16, 2014, at 6:34 AM, Victor Vysotskiy < > victor.vysotskiy(a)teokem.lu.se> wrote: > > Hi, > > I am straggling with a simple MPI program when a vector derived datatype > is used as origin/remote datatypes in the MPI_Put RMA operation. The > underlying idea is quite simple: a contiguous piece of memory is > interpreted as a 2D array and only its certain slice is going to be updated > via MPI_Put. To this end, I am using a MPI_Type_vector call. Everything > works fine when the stride value <= 24000, regardless count and > blocklength. However, if stride is greater than 24000 then program simply > hangs. The source code is attached and you can simply verify the issue by > compiling and running it with the following parameters: > > mpicc mpi_tvec_rma.c > > mpirun -np 2 ./a.out 10000 2000 > > Ok > > mpirun -np 2 ./a.out 20000 2000 > > Ok > > mpirun -np 2 ./a.out 30000 2000 > > Hangs > > Is there any internal/known limits to the size of MPI_TYPE_VECTOR > datatypes? > > So, I am really puzzled what is happening here and any help will be > greatly appreciated! > > With best regards, > > Victor. > > P.S. The attached code is perfectly runs with the OpenMPI v1.8.2. > > P.P.S. Below are given some details about hardware and software setups > used: > > MPICH2 Version: 1.5 > > MPICH2 Release date: Mon Oct 8 14:00:48 CDT 2012 > > MPICH2 Device: ch3:nemesis > > MPICH2 configure: --prefix=/opt/mpi/mpich2/ --disable-weak-symbols > > MPICH2 CC: gcc -O2 > > MPICH2 CXX: c++ -O2 > > MPICH2 F77: gfortran -O2 > > MPICH2 FC: gfortran -O2 > > GCC version 4.7.3 > > > _______________________________________________ > discuss mailing list discuss(a)mpich.org > To manage subscription options or unsubscribe: > https://lists.mpich.org/mailman/listinfo/discuss > > > > _______________________________________________ > discuss mailing list discuss(a)mpich.org > To manage subscription options or unsubscribe: > https://lists.mpich.org/mailman/listinfo/discuss > _______________________________________________ discuss mailing list discuss(a)mpich.org To manage subscription options or unsubscribe: https://lists.mpich.org/mailman/listinfo/discuss

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Re: [mpich-discuss] Problem with RMA && MPI_Type_vector when stride value is relatively large
by Seo, Sangmin 16 Oct '14

16 Oct '14

Hi Victor, Your code was not attached. Can you send it again? Thanks, Sangmin On Oct 16, 2014, at 6:34 AM, Victor Vysotskiy <victor.vysotskiy(a)teokem.lu.se<mailto:[email protected]>> wrote: Hi, I am straggling with a simple MPI program when a vector derived datatype is used as origin/remote datatypes in the MPI_Put RMA operation. The underlying idea is quite simple: a contiguous piece of memory is interpreted as a 2D array and only its certain slice is going to be updated via MPI_Put. To this end, I am using a MPI_Type_vector call. Everything works fine when the stride value <= 24000, regardless count and blocklength. However, if stride is greater than 24000 then program simply hangs. The source code is attached and you can simply verify the issue by compiling and running it with the following parameters: mpicc mpi_tvec_rma.c mpirun -np 2 ./a.out 10000 2000 Ok mpirun -np 2 ./a.out 20000 2000 Ok mpirun -np 2 ./a.out 30000 2000 Hangs Is there any internal/known limits to the size of MPI_TYPE_VECTOR datatypes? So, I am really puzzled what is happening here and any help will be greatly appreciated! With best regards, Victor. P.S. The attached code is perfectly runs with the OpenMPI v1.8.2. P.P.S. Below are given some details about hardware and software setups used: MPICH2 Version: 1.5 MPICH2 Release date: Mon Oct 8 14:00:48 CDT 2012 MPICH2 Device: ch3:nemesis MPICH2 configure: --prefix=/opt/mpi/mpich2/ --disable-weak-symbols MPICH2 CC: gcc -O2 MPICH2 CXX: c++ -O2 MPICH2 F77: gfortran -O2 MPICH2 FC: gfortran -O2 GCC version 4.7.3 _______________________________________________ discuss mailing list discuss(a)mpich.org<mailto:[email protected]> To manage subscription options or unsubscribe: https://lists.mpich.org/mailman/listinfo/discuss _______________________________________________ discuss mailing list discuss(a)mpich.org To manage subscription options or unsubscribe: https://lists.mpich.org/mailman/listinfo/discuss

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Re: [mpich-discuss] no man pages for mpich-3.1.3?
by Siegmar Gross 16 Oct '14

16 Oct '14

Hi Huiwei, > The latest mpich nightly built is mpich-master-v3.1.3-12-gc11ccde6.tar.gz. > > I have tested it on my laptop and it installed the man page. > > $ ./configure â?"prefix=/sandbox/install > $ ls /sandbox/install/share/man > man1 man3 > > Could you try again? Yes, everything is fine for mpich-master-v3.1.3-13-gf0151661. Thank you very much for your help. Kind regards Siegmar > â?" > Huiwei > > On Oct 15, 2014, at 1:29 AM, Siegmar Gross <Siegmar.Gross(a)informatik.hs-fulda.de> wrote: > > > Hi Pavan, > > > > thank you very much for your answer. Today I installed > > mpich-master-v3.1.3-9-g4d07079d, but I still have no man page > > directory. > > > > tyr mpich-3.1.3 177 ls -l /export2/prog/*/mpich-3.1.3_64_*/share | \ > > grep -e : -e drwx > > /export2/prog/Linux_x86_64/mpich-3.1.3_64_cc/share: > > drwxr-xr-x 3 root root 512 Oct 15 07:40 doc > > /export2/prog/Linux_x86_64/mpich-3.1.3_64_gcc/share: > > drwxr-xr-x 3 root root 512 Oct 15 07:26 doc > > /export2/prog/SunOS_sparc/mpich-3.1.3_64_cc/share: > > drwxr-xr-x 3 root root 512 Oct 15 08:23 doc > > /export2/prog/SunOS_sparc/mpich-3.1.3_64_gcc/share: > > drwxr-xr-x 3 root root 512 Oct 15 07:55 doc > > /export2/prog/SunOS_x86_64/mpich-3.1.3_64_cc/share: > > drwxr-xr-x 3 root root 512 Oct 15 07:47 doc > > /export2/prog/SunOS_x86_64/mpich-3.1.3_64_gcc/share: > > drwxr-xr-x 3 root root 512 Oct 15 08:03 doc > > tyr mpich-3.1.3 178 > > > > > > Kind regards > > > > Siegmar > > > > > >> Fixed in mpich/master: > >> > >> > > http://git.mpich.org/mpich.git/commitdiff/866598b9d77a5c953ff5cc12cda2b78ae… > > 33 > >> > >> ItÃ¢?Tll be in the nightly snapshot tonight. > >> > >> Ã¢?" Pavan > >> > >> On Oct 14, 2014, at 10:31 AM, Balaji, Pavan <balaji(a)anl.gov> wrote: > >> > >>> > >>> Sorry, this is my bad. I tried to add a Ã¢?ofixÃ¢?Â for an issue in 3.1.3 and > > clearly screwed up the common case. > >>> > >>> > > http://git.mpich.org/mpich.git/commitdiff/354396f8362fd72c8f6750a479d86804b… > > aa > >>> > >>> IÃ¢?Tll push a fix-for-this-fix into mpich/master shortly. > >>> > >>> Regards, > >>> > >>> Ã¢?" Pavan > >>> > >>> On Oct 14, 2014, at 9:49 AM, Siegmar Gross > > <Siegmar.Gross(a)informatik.hs-fulda.de> wrote: > >>> > >>>> Hi, > >>>> > >>>>> I have no problem to get man pages when I install mpich-3.1.3. > >>>>> Could you send us log files of configure, make, and make install > >>>>> (i.e., c.txt, m.txt, and mi.txt as described in > >>>>> http://www.mpich.org/static/downloads/3.1.3/mpich-3.1.3-installguide.pdf)? > >>>> > >>>> Yes, I have attached the files for my Linux box and gcc-4.9.1. > >>>> > >>>> I have the same problem for my three platforms (Solaris 10 Sparc, > >>>> Solaris 10 x86_64, and openSUSE Linux 12.1), i.e., <install dir>/share/man > >>>> isn't available, so that man pages couldn't be found. I didn't have this > >>>> problem with mpich-3.1.2. > >>>> > >>>> tyr prog 244 ls -l */mpich-3.1.3_64_*/share | grep -e : -e drwx > >>>> Linux_x86_64/mpich-3.1.3_64_cc/share: > >>>> drwxr-xr-x 3 root root 512 Oct 13 09:51 doc > >>>> Linux_x86_64/mpich-3.1.3_64_gcc/share: > >>>> drwxr-xr-x 3 root root 512 Oct 14 09:02 doc > >>>> SunOS_sparc/mpich-3.1.3_64_cc/share: > >>>> drwxr-xr-x 3 root root 512 Oct 13 10:15 doc > >>>> SunOS_sparc/mpich-3.1.3_64_gcc/share: > >>>> drwxr-xr-x 3 root root 512 Oct 14 09:32 doc > >>>> SunOS_x86_64/mpich-3.1.3_64_cc/share: > >>>> drwxr-xr-x 3 root root 512 Oct 13 10:06 doc > >>>> SunOS_x86_64/mpich-3.1.3_64_gcc/share: > >>>> drwxr-xr-x 3 root root 512 Oct 14 09:33 doc > >>>> tyr prog 245 > >>>> > >>>> I used for example the following commands for Linux. > >>>> > >>>> mkdir mpich-3.1.3-${SYSTEM_ENV}.${MACHINE_ENV}.64_gcc > >>>> cd mpich-3.1.3-${SYSTEM_ENV}.${MACHINE_ENV}.64_gcc > >>>> > >>>> ../mpich-3.1.3/configure --prefix=/usr/local/mpich-3.1.3_64_gcc \ > >>>> --libdir=/usr/local/mpich-3.1.3_64_gcc/lib64 \ > >>>> --includedir=/usr/local/mpich-3.1.3_64_gcc/include64 \ > >>>> CC="gcc" CXX="g++" F77="gfortran" FC="gfortran" \ > >>>> CFLAGS="-m64" CXXFLAGS="-m64" FFLAGS="-m64" FCFLAGS="-m64" \ > >>>> LDFLAGS="-m64" \ > >>>> --enable-f77 --enable-fc --enable-cxx --enable-romio \ > >>>> --enable-debuginfo --enable-smpcoll \ > >>>> --enable-threads=runtime --with-thread-package=posix \ > >>>> --enable-shared \ > >>>> |& tee log.configure.$SYSTEM_ENV.$MACHINE_ENV.64_gcc > >>>> > >>>> make |& tee log.make.$SYSTEM_ENV.$MACHINE_ENV.64_gcc > >>>> rm -r /usr/local/mpich-3.1.3_64_gcc.old > >>>> mv /usr/local/mpich-3.1.3_64_gcc /usr/local/mpich-3.1.3_64_gcc.old > >>>> make install |& tee log.make-install.$SYSTEM_ENV.$MACHINE_ENV.64_gcc > >>>> > >>>> > >>>> Thank you very much for any help in advance. > >>>> > >>>> > >>>> Kind regards > >>>> > >>>> Siegmar > >>>> > >>>> > >>>> > >>>>> Thanks, > >>>>> Sangmin > >>>>> > >>>>> > >>>>> On Oct 14, 2014, at 6:12 AM, Siegmar Gross > >>>> > > <Siegmar.Gross(a)informatik.hs-fulda.de<mailto:[email protected] > >>>> e>> wrote: > >>>>> > >>>>> Hi, > >>>>> > >>>>> I installed mpich-3.1.3, but didn't get man pages, which were > >>>>> installed automatically for version mpich-3.1.2. > >>>>> > >>>>> tyr mpich-3.1.3 226 ls -l /usr/local/mpich-3.1.2_64_gcc/share > >>>>> total 2 > >>>>> drwxr-xr-x 3 root root 512 Oct 14 09:28 doc > >>>>> drwxr-xr-x 4 root root 512 Oct 14 09:28 man > >>>>> tyr mpich-3.1.3 227 ls -l /usr/local/mpich-3.1.3_64_gcc/share > >>>>> total 1 > >>>>> drwxr-xr-x 3 root root 512 Oct 14 09:32 doc > >>>>> tyr mpich-3.1.3 228 > >>>>> > >>>>> > >>>>> tyr mpich-3.1.3-SunOS.sparc.64_gcc 232 grep MPI_Error_string log.* > >>>>> tyr mpich-3.1.3-SunOS.sparc.64_gcc 233 cd > >>>>> ../../mpich-3.1.2/mpich-3.1.2-SunOS.sparc.64_gcc > >>>>> tyr mpich-3.1.2-SunOS.sparc.64_gcc 234 grep MPI_Error_string log.* > >>>>> log.make-install.SunOS.sparc.64_gcc:/usr/local/bin/install -c -m 644 > >>>>> MPI_Error_string.3 > >>>>> /usr/local/mpich-3.1.2_64_gcc/share/man/man3/MPI_Error_string.3 > >>>>> tyr mpich-3.1.2-SunOS.sparc.64_gcc 235 > >>>>> > >>>>> > >>>>> Do I have to do something special for this version to install > >>>>> man pages? > >>>>> > >>>>> > >>>>> Kind regards > >>>>> > >>>>> Siegmar > >>>>> > >>>>> _______________________________________________ > >>>>> discuss mailing list discuss(a)mpich.org<mailto:[email protected]> > >>>>> To manage subscription options or unsubscribe: > >>>>> https://lists.mpich.org/mailman/listinfo/discuss > >>>>> > >>>> > >>>> _______________________________________________ > >>>> discuss mailing list discuss(a)mpich.org > >>>> To manage subscription options or unsubscribe: > >>>> https://lists.mpich.org/mailman/listinfo/discuss > >>> > >>> -- > >>> Pavan Balaji Ã¢o?Ã¯Â¸Â > >>> http://www.mcs.anl.gov/~balaji > >>> > >>> _______________________________________________ > >>> discuss mailing list discuss(a)mpich.org > >>> To manage subscription options or unsubscribe: > >>> https://lists.mpich.org/mailman/listinfo/discuss > >> > >> -- > >> Pavan Balaji Ã¢o?Ã¯Â¸Â > >> http://www.mcs.anl.gov/~balaji > >> > >> > > > > _______________________________________________ > > discuss mailing list discuss(a)mpich.org > > To manage subscription options or unsubscribe: > > https://lists.mpich.org/mailman/listinfo/discuss > > _______________________________________________ discuss mailing list discuss(a)mpich.org To manage subscription options or unsubscribe: https://lists.mpich.org/mailman/listinfo/discuss

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Problem with RMA && MPI_Type_vector when stride value is relatively large
by Victor Vysotskiy 16 Oct '14

16 Oct '14

Hi, I am straggling with a simple MPI program when a vector derived datatype is used as origin/remote datatypes in the MPI_Put RMA operation. The underlying idea is quite simple: a contiguous piece of memory is interpreted as a 2D array and only its certain slice is going to be updated via MPI_Put. To this end, I am using a MPI_Type_vector call. Everything works fine when the stride value <= 24000, regardless count and blocklength. However, if stride is greater than 24000 then program simply hangs. The source code is attached and you can simply verify the issue by compiling and running it with the following parameters: mpicc mpi_tvec_rma.c mpirun -np 2 ./a.out 10000 2000 Ok mpirun -np 2 ./a.out 20000 2000 Ok mpirun -np 2 ./a.out 30000 2000 Hangs Is there any internal/known limits to the size of MPI_TYPE_VECTOR datatypes? So, I am really puzzled what is happening here and any help will be greatly appreciated! With best regards, Victor. P.S. The attached code is perfectly runs with the OpenMPI v1.8.2. P.P.S. Below are given some details about hardware and software setups used: MPICH2 Version: 1.5 MPICH2 Release date: Mon Oct 8 14:00:48 CDT 2012 MPICH2 Device: ch3:nemesis MPICH2 configure: --prefix=/opt/mpi/mpich2/ --disable-weak-symbols MPICH2 CC: gcc -O2 MPICH2 CXX: c++ -O2 MPICH2 F77: gfortran -O2 MPICH2 FC: gfortran -O2 GCC version 4.7.3 _______________________________________________ discuss mailing list discuss(a)mpich.org To manage subscription options or unsubscribe: https://lists.mpich.org/mailman/listinfo/discuss

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Re: [mpich-discuss] no man pages for mpich-3.1.3?
by Lu, Huiwei 15 Oct '14

15 Oct '14

Hi, Siegmar, The latest mpich nightly built is mpich-master-v3.1.3-12-gc11ccde6.tar.gz. I have tested it on my laptop and it installed the man page. $ ./configure —prefix=/sandbox/install $ ls /sandbox/install/share/man man1 man3 Could you try again? — Huiwei On Oct 15, 2014, at 1:29 AM, Siegmar Gross <Siegmar.Gross(a)informatik.hs-fulda.de> wrote: > Hi Pavan, > > thank you very much for your answer. Today I installed > mpich-master-v3.1.3-9-g4d07079d, but I still have no man page > directory. > > tyr mpich-3.1.3 177 ls -l /export2/prog/*/mpich-3.1.3_64_*/share | \ > grep -e : -e drwx > /export2/prog/Linux_x86_64/mpich-3.1.3_64_cc/share: > drwxr-xr-x 3 root root 512 Oct 15 07:40 doc > /export2/prog/Linux_x86_64/mpich-3.1.3_64_gcc/share: > drwxr-xr-x 3 root root 512 Oct 15 07:26 doc > /export2/prog/SunOS_sparc/mpich-3.1.3_64_cc/share: > drwxr-xr-x 3 root root 512 Oct 15 08:23 doc > /export2/prog/SunOS_sparc/mpich-3.1.3_64_gcc/share: > drwxr-xr-x 3 root root 512 Oct 15 07:55 doc > /export2/prog/SunOS_x86_64/mpich-3.1.3_64_cc/share: > drwxr-xr-x 3 root root 512 Oct 15 07:47 doc > /export2/prog/SunOS_x86_64/mpich-3.1.3_64_gcc/share: > drwxr-xr-x 3 root root 512 Oct 15 08:03 doc > tyr mpich-3.1.3 178 > > > Kind regards > > Siegmar > > >> Fixed in mpich/master: >> >> > http://git.mpich.org/mpich.git/commitdiff/866598b9d77a5c953ff5cc12cda2b78ae… > 33 >> >> Itâ?Tll be in the nightly snapshot tonight. >> >> â?" Pavan >> >> On Oct 14, 2014, at 10:31 AM, Balaji, Pavan <balaji(a)anl.gov> wrote: >> >>> >>> Sorry, this is my bad. I tried to add a â?ofixâ? for an issue in 3.1.3 and > clearly screwed up the common case. >>> >>> > http://git.mpich.org/mpich.git/commitdiff/354396f8362fd72c8f6750a479d86804b… > aa >>> >>> Iâ?Tll push a fix-for-this-fix into mpich/master shortly. >>> >>> Regards, >>> >>> â?" Pavan >>> >>> On Oct 14, 2014, at 9:49 AM, Siegmar Gross > <Siegmar.Gross(a)informatik.hs-fulda.de> wrote: >>> >>>> Hi, >>>> >>>>> I have no problem to get man pages when I install mpich-3.1.3. >>>>> Could you send us log files of configure, make, and make install >>>>> (i.e., c.txt, m.txt, and mi.txt as described in >>>>> http://www.mpich.org/static/downloads/3.1.3/mpich-3.1.3-installguide.pdf)? >>>> >>>> Yes, I have attached the files for my Linux box and gcc-4.9.1. >>>> >>>> I have the same problem for my three platforms (Solaris 10 Sparc, >>>> Solaris 10 x86_64, and openSUSE Linux 12.1), i.e., <install dir>/share/man >>>> isn't available, so that man pages couldn't be found. I didn't have this >>>> problem with mpich-3.1.2. >>>> >>>> tyr prog 244 ls -l */mpich-3.1.3_64_*/share | grep -e : -e drwx >>>> Linux_x86_64/mpich-3.1.3_64_cc/share: >>>> drwxr-xr-x 3 root root 512 Oct 13 09:51 doc >>>> Linux_x86_64/mpich-3.1.3_64_gcc/share: >>>> drwxr-xr-x 3 root root 512 Oct 14 09:02 doc >>>> SunOS_sparc/mpich-3.1.3_64_cc/share: >>>> drwxr-xr-x 3 root root 512 Oct 13 10:15 doc >>>> SunOS_sparc/mpich-3.1.3_64_gcc/share: >>>> drwxr-xr-x 3 root root 512 Oct 14 09:32 doc >>>> SunOS_x86_64/mpich-3.1.3_64_cc/share: >>>> drwxr-xr-x 3 root root 512 Oct 13 10:06 doc >>>> SunOS_x86_64/mpich-3.1.3_64_gcc/share: >>>> drwxr-xr-x 3 root root 512 Oct 14 09:33 doc >>>> tyr prog 245 >>>> >>>> I used for example the following commands for Linux. >>>> >>>> mkdir mpich-3.1.3-${SYSTEM_ENV}.${MACHINE_ENV}.64_gcc >>>> cd mpich-3.1.3-${SYSTEM_ENV}.${MACHINE_ENV}.64_gcc >>>> >>>> ../mpich-3.1.3/configure --prefix=/usr/local/mpich-3.1.3_64_gcc \ >>>> --libdir=/usr/local/mpich-3.1.3_64_gcc/lib64 \ >>>> --includedir=/usr/local/mpich-3.1.3_64_gcc/include64 \ >>>> CC="gcc" CXX="g++" F77="gfortran" FC="gfortran" \ >>>> CFLAGS="-m64" CXXFLAGS="-m64" FFLAGS="-m64" FCFLAGS="-m64" \ >>>> LDFLAGS="-m64" \ >>>> --enable-f77 --enable-fc --enable-cxx --enable-romio \ >>>> --enable-debuginfo --enable-smpcoll \ >>>> --enable-threads=runtime --with-thread-package=posix \ >>>> --enable-shared \ >>>> |& tee log.configure.$SYSTEM_ENV.$MACHINE_ENV.64_gcc >>>> >>>> make |& tee log.make.$SYSTEM_ENV.$MACHINE_ENV.64_gcc >>>> rm -r /usr/local/mpich-3.1.3_64_gcc.old >>>> mv /usr/local/mpich-3.1.3_64_gcc /usr/local/mpich-3.1.3_64_gcc.old >>>> make install |& tee log.make-install.$SYSTEM_ENV.$MACHINE_ENV.64_gcc >>>> >>>> >>>> Thank you very much for any help in advance. >>>> >>>> >>>> Kind regards >>>> >>>> Siegmar >>>> >>>> >>>> >>>>> Thanks, >>>>> Sangmin >>>>> >>>>> >>>>> On Oct 14, 2014, at 6:12 AM, Siegmar Gross >>>> > <Siegmar.Gross(a)informatik.hs-fulda.de<mailto:[email protected] >>>> e>> wrote: >>>>> >>>>> Hi, >>>>> >>>>> I installed mpich-3.1.3, but didn't get man pages, which were >>>>> installed automatically for version mpich-3.1.2. >>>>> >>>>> tyr mpich-3.1.3 226 ls -l /usr/local/mpich-3.1.2_64_gcc/share >>>>> total 2 >>>>> drwxr-xr-x 3 root root 512 Oct 14 09:28 doc >>>>> drwxr-xr-x 4 root root 512 Oct 14 09:28 man >>>>> tyr mpich-3.1.3 227 ls -l /usr/local/mpich-3.1.3_64_gcc/share >>>>> total 1 >>>>> drwxr-xr-x 3 root root 512 Oct 14 09:32 doc >>>>> tyr mpich-3.1.3 228 >>>>> >>>>> >>>>> tyr mpich-3.1.3-SunOS.sparc.64_gcc 232 grep MPI_Error_string log.* >>>>> tyr mpich-3.1.3-SunOS.sparc.64_gcc 233 cd >>>>> ../../mpich-3.1.2/mpich-3.1.2-SunOS.sparc.64_gcc >>>>> tyr mpich-3.1.2-SunOS.sparc.64_gcc 234 grep MPI_Error_string log.* >>>>> log.make-install.SunOS.sparc.64_gcc:/usr/local/bin/install -c -m 644 >>>>> MPI_Error_string.3 >>>>> /usr/local/mpich-3.1.2_64_gcc/share/man/man3/MPI_Error_string.3 >>>>> tyr mpich-3.1.2-SunOS.sparc.64_gcc 235 >>>>> >>>>> >>>>> Do I have to do something special for this version to install >>>>> man pages? >>>>> >>>>> >>>>> Kind regards >>>>> >>>>> Siegmar >>>>> >>>>> _______________________________________________ >>>>> discuss mailing list discuss(a)mpich.org<mailto:[email protected]> >>>>> To manage subscription options or unsubscribe: >>>>> https://lists.mpich.org/mailman/listinfo/discuss >>>>> >>>> >>>> _______________________________________________ >>>> discuss mailing list discuss(a)mpich.org >>>> To manage subscription options or unsubscribe: >>>> https://lists.mpich.org/mailman/listinfo/discuss >>> >>> -- >>> Pavan Balaji âo?ï¸ >>> http://www.mcs.anl.gov/~balaji >>> >>> _______________________________________________ >>> discuss mailing list discuss(a)mpich.org >>> To manage subscription options or unsubscribe: >>> https://lists.mpich.org/mailman/listinfo/discuss >> >> -- >> Pavan Balaji âo?ï¸ >> http://www.mcs.anl.gov/~balaji >> >> > > _______________________________________________ > discuss mailing list discuss(a)mpich.org > To manage subscription options or unsubscribe: > https://lists.mpich.org/mailman/listinfo/discuss _______________________________________________ discuss mailing list discuss(a)mpich.org To manage subscription options or unsubscribe: https://lists.mpich.org/mailman/listinfo/discuss

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Re: [mpich-discuss] no man pages for mpich-3.1.3?
by Siegmar Gross 15 Oct '14

15 Oct '14

Hi Pavan, thank you very much for your answer. Today I installed mpich-master-v3.1.3-9-g4d07079d, but I still have no man page directory. tyr mpich-3.1.3 177 ls -l /export2/prog/*/mpich-3.1.3_64_*/share | \ grep -e : -e drwx /export2/prog/Linux_x86_64/mpich-3.1.3_64_cc/share: drwxr-xr-x 3 root root 512 Oct 15 07:40 doc /export2/prog/Linux_x86_64/mpich-3.1.3_64_gcc/share: drwxr-xr-x 3 root root 512 Oct 15 07:26 doc /export2/prog/SunOS_sparc/mpich-3.1.3_64_cc/share: drwxr-xr-x 3 root root 512 Oct 15 08:23 doc /export2/prog/SunOS_sparc/mpich-3.1.3_64_gcc/share: drwxr-xr-x 3 root root 512 Oct 15 07:55 doc /export2/prog/SunOS_x86_64/mpich-3.1.3_64_cc/share: drwxr-xr-x 3 root root 512 Oct 15 07:47 doc /export2/prog/SunOS_x86_64/mpich-3.1.3_64_gcc/share: drwxr-xr-x 3 root root 512 Oct 15 08:03 doc tyr mpich-3.1.3 178 Kind regards Siegmar > Fixed in mpich/master: > > http://git.mpich.org/mpich.git/commitdiff/866598b9d77a5c953ff5cc12cda2b78ae… 33 > > Itâ?Tll be in the nightly snapshot tonight. > > â?" Pavan > > On Oct 14, 2014, at 10:31 AM, Balaji, Pavan <balaji(a)anl.gov> wrote: > > > > > Sorry, this is my bad. I tried to add a â?ofixâ? for an issue in 3.1.3 and clearly screwed up the common case. > > > > http://git.mpich.org/mpich.git/commitdiff/354396f8362fd72c8f6750a479d86804b… aa > > > > Iâ?Tll push a fix-for-this-fix into mpich/master shortly. > > > > Regards, > > > > â?" Pavan > > > > On Oct 14, 2014, at 9:49 AM, Siegmar Gross <Siegmar.Gross(a)informatik.hs-fulda.de> wrote: > > > >> Hi, > >> > >>> I have no problem to get man pages when I install mpich-3.1.3. > >>> Could you send us log files of configure, make, and make install > >>> (i.e., c.txt, m.txt, and mi.txt as described in > >>> http://www.mpich.org/static/downloads/3.1.3/mpich-3.1.3-installguide.pdf)? > >> > >> Yes, I have attached the files for my Linux box and gcc-4.9.1. > >> > >> I have the same problem for my three platforms (Solaris 10 Sparc, > >> Solaris 10 x86_64, and openSUSE Linux 12.1), i.e., <install dir>/share/man > >> isn't available, so that man pages couldn't be found. I didn't have this > >> problem with mpich-3.1.2. > >> > >> tyr prog 244 ls -l */mpich-3.1.3_64_*/share | grep -e : -e drwx > >> Linux_x86_64/mpich-3.1.3_64_cc/share: > >> drwxr-xr-x 3 root root 512 Oct 13 09:51 doc > >> Linux_x86_64/mpich-3.1.3_64_gcc/share: > >> drwxr-xr-x 3 root root 512 Oct 14 09:02 doc > >> SunOS_sparc/mpich-3.1.3_64_cc/share: > >> drwxr-xr-x 3 root root 512 Oct 13 10:15 doc > >> SunOS_sparc/mpich-3.1.3_64_gcc/share: > >> drwxr-xr-x 3 root root 512 Oct 14 09:32 doc > >> SunOS_x86_64/mpich-3.1.3_64_cc/share: > >> drwxr-xr-x 3 root root 512 Oct 13 10:06 doc > >> SunOS_x86_64/mpich-3.1.3_64_gcc/share: > >> drwxr-xr-x 3 root root 512 Oct 14 09:33 doc > >> tyr prog 245 > >> > >> I used for example the following commands for Linux. > >> > >> mkdir mpich-3.1.3-${SYSTEM_ENV}.${MACHINE_ENV}.64_gcc > >> cd mpich-3.1.3-${SYSTEM_ENV}.${MACHINE_ENV}.64_gcc > >> > >> ../mpich-3.1.3/configure --prefix=/usr/local/mpich-3.1.3_64_gcc \ > >> --libdir=/usr/local/mpich-3.1.3_64_gcc/lib64 \ > >> --includedir=/usr/local/mpich-3.1.3_64_gcc/include64 \ > >> CC="gcc" CXX="g++" F77="gfortran" FC="gfortran" \ > >> CFLAGS="-m64" CXXFLAGS="-m64" FFLAGS="-m64" FCFLAGS="-m64" \ > >> LDFLAGS="-m64" \ > >> --enable-f77 --enable-fc --enable-cxx --enable-romio \ > >> --enable-debuginfo --enable-smpcoll \ > >> --enable-threads=runtime --with-thread-package=posix \ > >> --enable-shared \ > >> |& tee log.configure.$SYSTEM_ENV.$MACHINE_ENV.64_gcc > >> > >> make |& tee log.make.$SYSTEM_ENV.$MACHINE_ENV.64_gcc > >> rm -r /usr/local/mpich-3.1.3_64_gcc.old > >> mv /usr/local/mpich-3.1.3_64_gcc /usr/local/mpich-3.1.3_64_gcc.old > >> make install |& tee log.make-install.$SYSTEM_ENV.$MACHINE_ENV.64_gcc > >> > >> > >> Thank you very much for any help in advance. > >> > >> > >> Kind regards > >> > >> Siegmar > >> > >> > >> > >>> Thanks, > >>> Sangmin > >>> > >>> > >>> On Oct 14, 2014, at 6:12 AM, Siegmar Gross > >> <Siegmar.Gross(a)informatik.hs-fulda.de<mailto:[email protected] > >> e>> wrote: > >>> > >>> Hi, > >>> > >>> I installed mpich-3.1.3, but didn't get man pages, which were > >>> installed automatically for version mpich-3.1.2. > >>> > >>> tyr mpich-3.1.3 226 ls -l /usr/local/mpich-3.1.2_64_gcc/share > >>> total 2 > >>> drwxr-xr-x 3 root root 512 Oct 14 09:28 doc > >>> drwxr-xr-x 4 root root 512 Oct 14 09:28 man > >>> tyr mpich-3.1.3 227 ls -l /usr/local/mpich-3.1.3_64_gcc/share > >>> total 1 > >>> drwxr-xr-x 3 root root 512 Oct 14 09:32 doc > >>> tyr mpich-3.1.3 228 > >>> > >>> > >>> tyr mpich-3.1.3-SunOS.sparc.64_gcc 232 grep MPI_Error_string log.* > >>> tyr mpich-3.1.3-SunOS.sparc.64_gcc 233 cd > >>> ../../mpich-3.1.2/mpich-3.1.2-SunOS.sparc.64_gcc > >>> tyr mpich-3.1.2-SunOS.sparc.64_gcc 234 grep MPI_Error_string log.* > >>> log.make-install.SunOS.sparc.64_gcc:/usr/local/bin/install -c -m 644 > >>> MPI_Error_string.3 > >>> /usr/local/mpich-3.1.2_64_gcc/share/man/man3/MPI_Error_string.3 > >>> tyr mpich-3.1.2-SunOS.sparc.64_gcc 235 > >>> > >>> > >>> Do I have to do something special for this version to install > >>> man pages? > >>> > >>> > >>> Kind regards > >>> > >>> Siegmar > >>> > >>> _______________________________________________ > >>> discuss mailing list discuss(a)mpich.org<mailto:[email protected]> > >>> To manage subscription options or unsubscribe: > >>> https://lists.mpich.org/mailman/listinfo/discuss > >>> > >> > >> _______________________________________________ > >> discuss mailing list discuss(a)mpich.org > >> To manage subscription options or unsubscribe: > >> https://lists.mpich.org/mailman/listinfo/discuss > > > > -- > > Pavan Balaji âo?ï¸ > > http://www.mcs.anl.gov/~balaji > > > > _______________________________________________ > > discuss mailing list discuss(a)mpich.org > > To manage subscription options or unsubscribe: > > https://lists.mpich.org/mailman/listinfo/discuss > > -- > Pavan Balaji âo?ï¸ > http://www.mcs.anl.gov/~balaji > > _______________________________________________ discuss mailing list discuss(a)mpich.org To manage subscription options or unsubscribe: https://lists.mpich.org/mailman/listinfo/discuss

1 0

Re: [mpich-discuss] no man pages for mpich-3.1.3?
by Balaji, Pavan 14 Oct '14

14 Oct '14

Fixed in mpich/master: http://git.mpich.org/mpich.git/commitdiff/866598b9d77a5c953ff5cc12cda2b78ae… It’ll be in the nightly snapshot tonight. — Pavan On Oct 14, 2014, at 10:31 AM, Balaji, Pavan <balaji(a)anl.gov> wrote: > > Sorry, this is my bad. I tried to add a “fix” for an issue in 3.1.3 and clearly screwed up the common case. > > http://git.mpich.org/mpich.git/commitdiff/354396f8362fd72c8f6750a479d86804b… > > I’ll push a fix-for-this-fix into mpich/master shortly. > > Regards, > > — Pavan > > On Oct 14, 2014, at 9:49 AM, Siegmar Gross <Siegmar.Gross(a)informatik.hs-fulda.de> wrote: > >> Hi, >> >>> I have no problem to get man pages when I install mpich-3.1.3. >>> Could you send us log files of configure, make, and make install >>> (i.e., c.txt, m.txt, and mi.txt as described in >>> http://www.mpich.org/static/downloads/3.1.3/mpich-3.1.3-installguide.pdf)? >> >> Yes, I have attached the files for my Linux box and gcc-4.9.1. >> >> I have the same problem for my three platforms (Solaris 10 Sparc, >> Solaris 10 x86_64, and openSUSE Linux 12.1), i.e., <install dir>/share/man >> isn't available, so that man pages couldn't be found. I didn't have this >> problem with mpich-3.1.2. >> >> tyr prog 244 ls -l */mpich-3.1.3_64_*/share | grep -e : -e drwx >> Linux_x86_64/mpich-3.1.3_64_cc/share: >> drwxr-xr-x 3 root root 512 Oct 13 09:51 doc >> Linux_x86_64/mpich-3.1.3_64_gcc/share: >> drwxr-xr-x 3 root root 512 Oct 14 09:02 doc >> SunOS_sparc/mpich-3.1.3_64_cc/share: >> drwxr-xr-x 3 root root 512 Oct 13 10:15 doc >> SunOS_sparc/mpich-3.1.3_64_gcc/share: >> drwxr-xr-x 3 root root 512 Oct 14 09:32 doc >> SunOS_x86_64/mpich-3.1.3_64_cc/share: >> drwxr-xr-x 3 root root 512 Oct 13 10:06 doc >> SunOS_x86_64/mpich-3.1.3_64_gcc/share: >> drwxr-xr-x 3 root root 512 Oct 14 09:33 doc >> tyr prog 245 >> >> I used for example the following commands for Linux. >> >> mkdir mpich-3.1.3-${SYSTEM_ENV}.${MACHINE_ENV}.64_gcc >> cd mpich-3.1.3-${SYSTEM_ENV}.${MACHINE_ENV}.64_gcc >> >> ../mpich-3.1.3/configure --prefix=/usr/local/mpich-3.1.3_64_gcc \ >> --libdir=/usr/local/mpich-3.1.3_64_gcc/lib64 \ >> --includedir=/usr/local/mpich-3.1.3_64_gcc/include64 \ >> CC="gcc" CXX="g++" F77="gfortran" FC="gfortran" \ >> CFLAGS="-m64" CXXFLAGS="-m64" FFLAGS="-m64" FCFLAGS="-m64" \ >> LDFLAGS="-m64" \ >> --enable-f77 --enable-fc --enable-cxx --enable-romio \ >> --enable-debuginfo --enable-smpcoll \ >> --enable-threads=runtime --with-thread-package=posix \ >> --enable-shared \ >> |& tee log.configure.$SYSTEM_ENV.$MACHINE_ENV.64_gcc >> >> make |& tee log.make.$SYSTEM_ENV.$MACHINE_ENV.64_gcc >> rm -r /usr/local/mpich-3.1.3_64_gcc.old >> mv /usr/local/mpich-3.1.3_64_gcc /usr/local/mpich-3.1.3_64_gcc.old >> make install |& tee log.make-install.$SYSTEM_ENV.$MACHINE_ENV.64_gcc >> >> >> Thank you very much for any help in advance. >> >> >> Kind regards >> >> Siegmar >> >> >> >>> Thanks, >>> Sangmin >>> >>> >>> On Oct 14, 2014, at 6:12 AM, Siegmar Gross >> <Siegmar.Gross(a)informatik.hs-fulda.de<mailto:[email protected] >> e>> wrote: >>> >>> Hi, >>> >>> I installed mpich-3.1.3, but didn't get man pages, which were >>> installed automatically for version mpich-3.1.2. >>> >>> tyr mpich-3.1.3 226 ls -l /usr/local/mpich-3.1.2_64_gcc/share >>> total 2 >>> drwxr-xr-x 3 root root 512 Oct 14 09:28 doc >>> drwxr-xr-x 4 root root 512 Oct 14 09:28 man >>> tyr mpich-3.1.3 227 ls -l /usr/local/mpich-3.1.3_64_gcc/share >>> total 1 >>> drwxr-xr-x 3 root root 512 Oct 14 09:32 doc >>> tyr mpich-3.1.3 228 >>> >>> >>> tyr mpich-3.1.3-SunOS.sparc.64_gcc 232 grep MPI_Error_string log.* >>> tyr mpich-3.1.3-SunOS.sparc.64_gcc 233 cd >>> ../../mpich-3.1.2/mpich-3.1.2-SunOS.sparc.64_gcc >>> tyr mpich-3.1.2-SunOS.sparc.64_gcc 234 grep MPI_Error_string log.* >>> log.make-install.SunOS.sparc.64_gcc:/usr/local/bin/install -c -m 644 >>> MPI_Error_string.3 >>> /usr/local/mpich-3.1.2_64_gcc/share/man/man3/MPI_Error_string.3 >>> tyr mpich-3.1.2-SunOS.sparc.64_gcc 235 >>> >>> >>> Do I have to do something special for this version to install >>> man pages? >>> >>> >>> Kind regards >>> >>> Siegmar >>> >>> _______________________________________________ >>> discuss mailing list discuss(a)mpich.org<mailto:[email protected]> >>> To manage subscription options or unsubscribe: >>> https://lists.mpich.org/mailman/listinfo/discuss >>> >> >> _______________________________________________ >> discuss mailing list discuss(a)mpich.org >> To manage subscription options or unsubscribe: >> https://lists.mpich.org/mailman/listinfo/discuss > > -- > Pavan Balaji ✉️ > http://www.mcs.anl.gov/~balaji > > _______________________________________________ > discuss mailing list discuss(a)mpich.org > To manage subscription options or unsubscribe: > https://lists.mpich.org/mailman/listinfo/discuss -- Pavan Balaji ✉️ http://www.mcs.anl.gov/~balaji _______________________________________________ discuss mailing list discuss(a)mpich.org To manage subscription options or unsubscribe: https://lists.mpich.org/mailman/listinfo/discuss

1 0

Re: [mpich-discuss] no man pages for mpich-3.1.3?
by Balaji, Pavan 14 Oct '14

14 Oct '14

Sorry, this is my bad. I tried to add a “fix” for an issue in 3.1.3 and clearly screwed up the common case. http://git.mpich.org/mpich.git/commitdiff/354396f8362fd72c8f6750a479d86804b… I’ll push a fix-for-this-fix into mpich/master shortly. Regards, — Pavan On Oct 14, 2014, at 9:49 AM, Siegmar Gross <Siegmar.Gross(a)informatik.hs-fulda.de> wrote: > Hi, > >> I have no problem to get man pages when I install mpich-3.1.3. >> Could you send us log files of configure, make, and make install >> (i.e., c.txt, m.txt, and mi.txt as described in >> http://www.mpich.org/static/downloads/3.1.3/mpich-3.1.3-installguide.pdf)? > > Yes, I have attached the files for my Linux box and gcc-4.9.1. > > I have the same problem for my three platforms (Solaris 10 Sparc, > Solaris 10 x86_64, and openSUSE Linux 12.1), i.e., <install dir>/share/man > isn't available, so that man pages couldn't be found. I didn't have this > problem with mpich-3.1.2. > > tyr prog 244 ls -l */mpich-3.1.3_64_*/share | grep -e : -e drwx > Linux_x86_64/mpich-3.1.3_64_cc/share: > drwxr-xr-x 3 root root 512 Oct 13 09:51 doc > Linux_x86_64/mpich-3.1.3_64_gcc/share: > drwxr-xr-x 3 root root 512 Oct 14 09:02 doc > SunOS_sparc/mpich-3.1.3_64_cc/share: > drwxr-xr-x 3 root root 512 Oct 13 10:15 doc > SunOS_sparc/mpich-3.1.3_64_gcc/share: > drwxr-xr-x 3 root root 512 Oct 14 09:32 doc > SunOS_x86_64/mpich-3.1.3_64_cc/share: > drwxr-xr-x 3 root root 512 Oct 13 10:06 doc > SunOS_x86_64/mpich-3.1.3_64_gcc/share: > drwxr-xr-x 3 root root 512 Oct 14 09:33 doc > tyr prog 245 > > I used for example the following commands for Linux. > > mkdir mpich-3.1.3-${SYSTEM_ENV}.${MACHINE_ENV}.64_gcc > cd mpich-3.1.3-${SYSTEM_ENV}.${MACHINE_ENV}.64_gcc > > ../mpich-3.1.3/configure --prefix=/usr/local/mpich-3.1.3_64_gcc \ > --libdir=/usr/local/mpich-3.1.3_64_gcc/lib64 \ > --includedir=/usr/local/mpich-3.1.3_64_gcc/include64 \ > CC="gcc" CXX="g++" F77="gfortran" FC="gfortran" \ > CFLAGS="-m64" CXXFLAGS="-m64" FFLAGS="-m64" FCFLAGS="-m64" \ > LDFLAGS="-m64" \ > --enable-f77 --enable-fc --enable-cxx --enable-romio \ > --enable-debuginfo --enable-smpcoll \ > --enable-threads=runtime --with-thread-package=posix \ > --enable-shared \ > |& tee log.configure.$SYSTEM_ENV.$MACHINE_ENV.64_gcc > > make |& tee log.make.$SYSTEM_ENV.$MACHINE_ENV.64_gcc > rm -r /usr/local/mpich-3.1.3_64_gcc.old > mv /usr/local/mpich-3.1.3_64_gcc /usr/local/mpich-3.1.3_64_gcc.old > make install |& tee log.make-install.$SYSTEM_ENV.$MACHINE_ENV.64_gcc > > > Thank you very much for any help in advance. > > > Kind regards > > Siegmar > > > >> Thanks, >> Sangmin >> >> >> On Oct 14, 2014, at 6:12 AM, Siegmar Gross > <Siegmar.Gross(a)informatik.hs-fulda.de<mailto:[email protected] > e>> wrote: >> >> Hi, >> >> I installed mpich-3.1.3, but didn't get man pages, which were >> installed automatically for version mpich-3.1.2. >> >> tyr mpich-3.1.3 226 ls -l /usr/local/mpich-3.1.2_64_gcc/share >> total 2 >> drwxr-xr-x 3 root root 512 Oct 14 09:28 doc >> drwxr-xr-x 4 root root 512 Oct 14 09:28 man >> tyr mpich-3.1.3 227 ls -l /usr/local/mpich-3.1.3_64_gcc/share >> total 1 >> drwxr-xr-x 3 root root 512 Oct 14 09:32 doc >> tyr mpich-3.1.3 228 >> >> >> tyr mpich-3.1.3-SunOS.sparc.64_gcc 232 grep MPI_Error_string log.* >> tyr mpich-3.1.3-SunOS.sparc.64_gcc 233 cd >> ../../mpich-3.1.2/mpich-3.1.2-SunOS.sparc.64_gcc >> tyr mpich-3.1.2-SunOS.sparc.64_gcc 234 grep MPI_Error_string log.* >> log.make-install.SunOS.sparc.64_gcc:/usr/local/bin/install -c -m 644 >> MPI_Error_string.3 >> /usr/local/mpich-3.1.2_64_gcc/share/man/man3/MPI_Error_string.3 >> tyr mpich-3.1.2-SunOS.sparc.64_gcc 235 >> >> >> Do I have to do something special for this version to install >> man pages? >> >> >> Kind regards >> >> Siegmar >> >> _______________________________________________ >> discuss mailing list discuss(a)mpich.org<mailto:[email protected]> >> To manage subscription options or unsubscribe: >> https://lists.mpich.org/mailman/listinfo/discuss >> > > _______________________________________________ > discuss mailing list discuss(a)mpich.org > To manage subscription options or unsubscribe: > https://lists.mpich.org/mailman/listinfo/discuss -- Pavan Balaji ✉️ http://www.mcs.anl.gov/~balaji _______________________________________________ discuss mailing list discuss(a)mpich.org To manage subscription options or unsubscribe: https://lists.mpich.org/mailman/listinfo/discuss

1 0

Re: [mpich-discuss] no man pages for mpich-3.1.3?
by Siegmar Gross 14 Oct '14

14 Oct '14

Hi, > I have no problem to get man pages when I install mpich-3.1.3. > Could you send us log files of configure, make, and make install > (i.e., c.txt, m.txt, and mi.txt as described in > http://www.mpich.org/static/downloads/3.1.3/mpich-3.1.3-installguide.pdf)? Yes, I have attached the files for my Linux box and gcc-4.9.1. I have the same problem for my three platforms (Solaris 10 Sparc, Solaris 10 x86_64, and openSUSE Linux 12.1), i.e., <install dir>/share/man isn't available, so that man pages couldn't be found. I didn't have this problem with mpich-3.1.2. tyr prog 244 ls -l */mpich-3.1.3_64_*/share | grep -e : -e drwx Linux_x86_64/mpich-3.1.3_64_cc/share: drwxr-xr-x 3 root root 512 Oct 13 09:51 doc Linux_x86_64/mpich-3.1.3_64_gcc/share: drwxr-xr-x 3 root root 512 Oct 14 09:02 doc SunOS_sparc/mpich-3.1.3_64_cc/share: drwxr-xr-x 3 root root 512 Oct 13 10:15 doc SunOS_sparc/mpich-3.1.3_64_gcc/share: drwxr-xr-x 3 root root 512 Oct 14 09:32 doc SunOS_x86_64/mpich-3.1.3_64_cc/share: drwxr-xr-x 3 root root 512 Oct 13 10:06 doc SunOS_x86_64/mpich-3.1.3_64_gcc/share: drwxr-xr-x 3 root root 512 Oct 14 09:33 doc tyr prog 245 I used for example the following commands for Linux. mkdir mpich-3.1.3-${SYSTEM_ENV}.${MACHINE_ENV}.64_gcc cd mpich-3.1.3-${SYSTEM_ENV}.${MACHINE_ENV}.64_gcc ../mpich-3.1.3/configure --prefix=/usr/local/mpich-3.1.3_64_gcc \ --libdir=/usr/local/mpich-3.1.3_64_gcc/lib64 \ --includedir=/usr/local/mpich-3.1.3_64_gcc/include64 \ CC="gcc" CXX="g++" F77="gfortran" FC="gfortran" \ CFLAGS="-m64" CXXFLAGS="-m64" FFLAGS="-m64" FCFLAGS="-m64" \ LDFLAGS="-m64" \ --enable-f77 --enable-fc --enable-cxx --enable-romio \ --enable-debuginfo --enable-smpcoll \ --enable-threads=runtime --with-thread-package=posix \ --enable-shared \ |& tee log.configure.$SYSTEM_ENV.$MACHINE_ENV.64_gcc make |& tee log.make.$SYSTEM_ENV.$MACHINE_ENV.64_gcc rm -r /usr/local/mpich-3.1.3_64_gcc.old mv /usr/local/mpich-3.1.3_64_gcc /usr/local/mpich-3.1.3_64_gcc.old make install |& tee log.make-install.$SYSTEM_ENV.$MACHINE_ENV.64_gcc Thank you very much for any help in advance. Kind regards Siegmar > Thanks, > Sangmin > > > On Oct 14, 2014, at 6:12 AM, Siegmar Gross <Siegmar.Gross(a)informatik.hs-fulda.de<mailto:[email protected] e>> wrote: > > Hi, > > I installed mpich-3.1.3, but didn't get man pages, which were > installed automatically for version mpich-3.1.2. > > tyr mpich-3.1.3 226 ls -l /usr/local/mpich-3.1.2_64_gcc/share > total 2 > drwxr-xr-x 3 root root 512 Oct 14 09:28 doc > drwxr-xr-x 4 root root 512 Oct 14 09:28 man > tyr mpich-3.1.3 227 ls -l /usr/local/mpich-3.1.3_64_gcc/share > total 1 > drwxr-xr-x 3 root root 512 Oct 14 09:32 doc > tyr mpich-3.1.3 228 > > > tyr mpich-3.1.3-SunOS.sparc.64_gcc 232 grep MPI_Error_string log.* > tyr mpich-3.1.3-SunOS.sparc.64_gcc 233 cd > ../../mpich-3.1.2/mpich-3.1.2-SunOS.sparc.64_gcc > tyr mpich-3.1.2-SunOS.sparc.64_gcc 234 grep MPI_Error_string log.* > log.make-install.SunOS.sparc.64_gcc:/usr/local/bin/install -c -m 644 > MPI_Error_string.3 > /usr/local/mpich-3.1.2_64_gcc/share/man/man3/MPI_Error_string.3 > tyr mpich-3.1.2-SunOS.sparc.64_gcc 235 > > > Do I have to do something special for this version to install > man pages? > > > Kind regards > > Siegmar > > _______________________________________________ > discuss mailing list discuss(a)mpich.org<mailto:[email protected]> > To manage subscription options or unsubscribe: > https://lists.mpich.org/mailman/listinfo/discuss > configure: loading site script /usr/share/site/x86_64-unknown-linux-gnu Configuring MPICH version 3.1.3 with '--prefix=/usr/local/mpich-3.1.3_64_gcc' '--libdir=/usr/local/mpich-3.1.3_64_gcc/lib64' '--includedir=/usr/local/mpich-3.1.3_64_gcc/include64' 'CC=gcc' 'CXX=g++' 'F77=gfortran' 'FC=gfortran' 'CFLAGS=-m64' 'CXXFLAGS=-m64' 'FFLAGS=-m64' 'FCFLAGS=-m64' 'LDFLAGS=-m64' '--enable-f77' '--enable-fc' '--enable-cxx' '--enable-romio' '--enable-debuginfo' '--enable-smpcoll' '--enable-threads=runtime' '--with-thread-package=posix' '--enable-shared' 'CPPFLAGS=-DLinux -Dx86_64' Running on system: Linux linpc1 3.1.10-1.29-desktop #1 SMP PREEMPT Fri May 31 20:10:04 UTC 2013 (2529847) x86_64 x86_64 x86_64 GNU/Linux checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking how to run the C preprocessor... gcc -E checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking for style of include used by make... GNU checking whether make supports nested variables... yes checking dependency style of gcc... gcc3 checking whether to enable maintainer-specific portions of Makefiles... yes checking for ar... ar checking the archiver (ar) interface... ar checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/local/bin/ld checking if the linker (/usr/local/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/local/bin/nm -B checking the name lister (/usr/local/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format... func_convert_file_noop checking how to convert x86_64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/local/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/local/bin/nm -B output from gcc object... ok checking for sysroot... no checking for mt... mt checking if mt is a manifest tool... no checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/local/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking whether make supports nested variables... (cached) yes checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... gcc3 checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/local/bin/ld -m elf_x86_64 checking if the linker (/usr/local/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the g++ linker (/usr/local/bin/ld -m elf_x86_64) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... no checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/local/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether we are using the GNU Fortran compiler... yes checking whether gfortran accepts -g... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... no checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/local/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether we are using the GNU Fortran 77 compiler... yes checking whether gfortran accepts -g... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... no checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/local/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking hcoll/api/hcoll_api.h usability... no checking hcoll/api/hcoll_api.h presence... no checking for hcoll/api/hcoll_api.h... no checking for hcoll_init in -lhcoll... no configure: RUNNING PREREQ FOR ch3:nemesis checking for getpagesize... yes checking for getpagesize... (cached) yes configure: ===== configuring src/mpl ===== configure: running /bin/sh ../../../mpich-3.1.3/src/mpl/configure --disable-option-checking '--prefix=/usr/local/mpich-3.1.3_64_gcc' '--libdir=/usr/local/mpich-3.1.3_64_gcc/lib64' '--includedir=/usr/local/mpich-3.1.3_64_gcc/include64' 'CC=gcc' 'CXX=g++' 'F77=gfortran' 'FC=gfortran' 'CFLAGS=-m64 ' 'CXXFLAGS=-m64 ' 'FFLAGS=-m64 ' 'FCFLAGS=-m64 ' 'LDFLAGS=-m64 ' '--enable-f77' '--enable-fc' '--enable-cxx' '--enable-romio' '--enable-debuginfo' '--enable-smpcoll' '--enable-threads=runtime' '--with-thread-package=posix' '--enable-shared' 'CPPFLAGS=-DLinux -Dx86_64 ' --cache-file=/dev/null --srcdir=../../../mpich-3.1.3/src/mpl configure: loading site script /usr/share/site/x86_64-unknown-linux-gnu checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for style of include used by make... GNU checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking the archiver (ar) interface... ar checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/local/bin/ld checking if the linker (/usr/local/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/local/bin/nm -B checking the name lister (/usr/local/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format... func_convert_file_noop checking how to convert x86_64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/local/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/local/bin/nm -B output from gcc object... ok checking for sysroot... no checking for mt... mt checking if mt is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/local/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking whether make supports nested variables... (cached) yes checking for an ANSI C-conforming const... yes checking for C/C++ restrict keyword... __restrict checking for inline... inline checking for variable argument list macro functionality... yes checking for gcov... gcov checking whether the compiler supports __typeof(variable)... yes checking stdio.h usability... yes checking stdio.h presence... yes checking for stdio.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking stdarg.h usability... yes checking stdarg.h presence... yes checking for stdarg.h... yes checking ctype.h usability... yes checking ctype.h presence... yes checking for ctype.h... yes checking search.h usability... yes checking search.h presence... yes checking for search.h... yes checking for sys/types.h... (cached) yes checking sys/uio.h usability... yes checking sys/uio.h presence... yes checking for sys/uio.h... yes checking for inttypes.h... (cached) yes checking for stdint.h... (cached) yes checking valgrind.h usability... no checking valgrind.h presence... no checking for valgrind.h... no checking memcheck.h usability... no checking memcheck.h presence... no checking for memcheck.h... no checking valgrind/valgrind.h usability... no checking valgrind/valgrind.h presence... no checking for valgrind/valgrind.h... no checking valgrind/memcheck.h usability... no checking valgrind/memcheck.h presence... no checking for valgrind/memcheck.h... no checking helgrind.h usability... no checking helgrind.h presence... no checking for helgrind.h... no checking valgrind/helgrind.h usability... no checking valgrind/helgrind.h presence... no checking for valgrind/helgrind.h... no checking drd.h usability... no checking drd.h presence... no checking for drd.h... no checking valgrind/drd.h usability... no checking valgrind/drd.h presence... no checking for valgrind/drd.h... no checking whether the valgrind headers are broken or too old... yes checking for strdup... yes checking whether strdup needs a declaration... no checking for snprintf... yes checking whether snprintf needs a declaration... no checking for strncmp... yes checking whether strncmp needs a declaration... no checking for putenv... yes checking whether putenv needs a declaration... no checking whether __attribute__ allowed... yes checking whether __attribute__((format)) allowed... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating localdefs config.status: creating include/config.h config.status: executing depfiles commands config.status: executing libtool commands config.status: executing include/mplconfig.h commands config.status: creating include/mplconfig.h - prefix MPL for include/config.h defines configure: ===== done with src/mpl configure ===== configure: sourcing src/mpl/localdefs configure: ===== configuring src/openpa ===== configure: running /bin/sh ../../../mpich-3.1.3/src/openpa/configure --disable-option-checking '--prefix=/usr/local/mpich-3.1.3_64_gcc' --with-atomic-primitives=auto_allow_emulation '--libdir=/usr/local/mpich-3.1.3_64_gcc/lib64' '--includedir=/usr/local/mpich-3.1.3_64_gcc/include64' 'CC=gcc' 'CXX=g++' 'F77=gfortran' 'FC=gfortran' 'CFLAGS=-m64 ' 'CXXFLAGS=-m64 ' 'FFLAGS=-m64 ' 'FCFLAGS=-m64 ' 'LDFLAGS=-m64 ' '--enable-f77' '--enable-fc' '--enable-cxx' '--enable-romio' '--enable-debuginfo' '--enable-smpcoll' '--enable-threads=runtime' '--with-thread-package=posix' '--enable-shared' 'CPPFLAGS=-DLinux -Dx86_64 -I/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/mpl/include -I/export2/src/mpich-3.1.3/mpich-3.1.3/src/mpl/include -I/export2/src/mpich-3.1.3/mpich-3.1.3/src/openpa/src -I/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/openpa/src' --cache-file=/dev/null --srcdir=../../../mpich-3.1.3/src/openpa configure: loading site script /usr/share/site/x86_64-unknown-linux-gnu checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for style of include used by make... GNU checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking the archiver (ar) interface... ar checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/local/bin/ld checking if the linker (/usr/local/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/local/bin/nm -B checking the name lister (/usr/local/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format... func_convert_file_noop checking how to convert x86_64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/local/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/local/bin/nm -B output from gcc object... ok checking for sysroot... no checking for mt... mt checking if mt is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/local/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking whether make supports nested variables... (cached) yes checking for gcc... (cached) gcc checking whether we are using the GNU C compiler... (cached) yes checking whether gcc accepts -g... (cached) yes checking for gcc option to accept ISO C89... (cached) none needed checking whether gcc understands -c and -o together... (cached) yes checking dependency style of gcc... (cached) gcc3 checking whether to enable assertions... yes checking pthread.h usability... yes checking pthread.h presence... yes checking for pthread.h... yes checking atomic.h usability... no checking atomic.h presence... no checking for atomic.h... no checking intrin.h usability... no checking intrin.h presence... no checking for intrin.h... no checking for inttypes.h... (cached) yes checking for stdint.h... (cached) yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking for C/C++ restrict keyword... __restrict checking for inline... inline checking for an ANSI C-conforming const... yes checking for pthread_create in -lpthread... yes checking for pthread_yield... yes checking if 100 threads can be run at once... yes checking size of void *... 8 checking size of int... 4 checking whether __attribute__ allowed... yes checking whether __attribute__((format)) allowed... yes checking if compiler rejects bogus asm statements... yes checking for support for gcc x86/x86_64 primitives... yes checking for support for gcc x86 primitives for pre-Pentium 4... yes checking for support for gcc ia64 primitives... no checking for support for gcc PowerPC atomics... no checking for support for gcc ARM atomics... no checking for support for gcc SiCortex atomics... no checking for support for gcc atomic intrinsics... yes checking for support for Windows NT atomic intrinsics... no checking for support for Sun atomic operations library... no checking whether to enable strict fairness checks... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating test/Makefile config.status: creating openpa.pc config.status: creating src/config.h config.status: executing depfiles commands config.status: executing libtool commands config.status: executing src/opa_config.h commands config.status: creating src/opa_config.h - prefix OPA for src/config.h defines configure: ===== done with src/openpa configure ===== sourcing /export2/src/mpich-3.1.3/mpich-3.1.3/src/pm/hydra/mpichprereq checking whether the compiler defines __func__... yes checking whether the compiler defines __FUNC__... no checking whether the compiler sets __FUNCTION__... yes checking whether C compiler accepts option -O2... yes checking whether C compiler option -O2 works with an invalid prototype program... yes checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes checking for type of weak symbol alias support... pragma weak checking whether __attribute__ ((weak)) allowed... yes checking whether __attribute__ ((weak_import)) allowed... yes checking whether __attribute__((weak,alias(...))) allowed... yes checking for multiple weak symbol support... yes checking for shared library (esp. rpath) characteristics of CC... done (results in src/env/cc_shlib.conf) checking whether Fortran 77 compiler accepts option -O2... yes checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes checking how to get verbose linking output from gfortran... -v checking for Fortran 77 libraries of gfortran... -L/usr/local/gcc-4.9.1/lib/gcc/x86_64-unknown-linux-gnu/4.9.1 -L/usr/local/gcc-4.9.1/lib/gcc/x86_64-unknown-linux-gnu/4.9.1/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/local/gcc-4.9.1/lib/gcc/x86_64-unknown-linux-gnu/4.9.1/../../.. -lgfortran -lm -lquadmath checking whether gfortran accepts the FLIBS found by autoconf... yes checking whether gcc links with FLIBS found by autoconf... yes checking whether Fortran 77 and C objects are compatible... yes checking for linker for Fortran main program... Use Fortran to link programs checking for Fortran 77 name mangling... lower uscore checking for libraries to link Fortran main with C stdio routines... none checking whether Fortran init will work with C... yes checking for extension for Fortran 90 programs... f90 checking whether the Fortran 90 compiler (gfortran -m64 -m64 ) works... yes checking whether the Fortran 90 compiler (gfortran -m64 -m64 ) is a cross-compiler... no checking whether Fortran 90 compiler works with Fortran 77 compiler... yes checking for shared library (esp. rpath) characteristics of F77... done (results in src/env/f77_shlib.conf) checking whether Fortran 77 accepts ! for comments... yes checking for include directory flag for Fortran... -I checking for Fortran 77 flag for library directories... -L checking whether Fortran 77 compiler processes .F files with C preprocessor... yes checking whether gfortran allows mismatched arguments... yes checking for Fortran 2008 support... no checking for shared library (esp. rpath) characteristics of FC... done (results in src/env/fc_shlib.conf) checking whether the Fortran 90 compiler (gfortran -m64 -m64 ) works... yes checking whether the Fortran 90 compiler (gfortran -m64 -m64 ) is a cross-compiler... no checking for Fortran 90 module extension... mod checking for Fortran 90 module include flag... -I checking for Fortran 90 module output directory flag... -J checking whether Fortran 90 compiler accepts option -O2... yes checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes checking whether Fortran 90 compiler processes .F90 files with C preprocessor... yes checking what libraries are needed to link Fortran90 programs with C routines that use stdio... none checking whether the C++ compiler g++ can build an executable... yes checking whether C++ compiler works with string... yes checking whether the compiler supports exceptions... yes checking whether the compiler recognizes bool as a built-in type... yes checking whether the compiler implements namespaces... yes checking whether <iostream> available... yes checking whether the compiler implements the namespace std... yes checking whether <math> available... no checking for GNU g++ version... 4 . 9 checking for shared library (esp. rpath) characteristics of CXX... done (results in src/env/cxx_shlib.conf) checking whether C++ compiler accepts option -O2... yes checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes checking for perl... /usr/bin/perl checking for ar... ar checking for ranlib... ranlib checking for killall... killall checking whether install works... yes checking whether mkdir -p works... yes checking for make... make checking whether clock skew breaks make... no checking whether make supports include... yes checking whether make allows comments in actions... yes checking for virtual path format... VPATH checking whether make sets CFLAGS... yes checking for bash... /bin/bash checking whether /bin/bash supports arrays... yes configure: WARNING: Some versions of gcc do not include debugging information within the executable. Totalview requires this information to detect an MPICH code. If you have trouble, try linking with the additional option +noobjdebug on all link lines (consider adding it to LDFLAGS) checking for doctext... false checking for an ANSI C-conforming const... yes checking for working volatile... yes checking for C/C++ restrict keyword... __restrict checking for inline... inline checking whether __attribute__ allowed... yes checking whether __attribute__((format)) allowed... yes checking if C compiler supports __builtin_expect... yes checking whether byte ordering is bigendian... no checking whether C compiler allows unaligned doubles... yes checking whether gcc supports __func__... yes checking whether long double is supported... yes checking whether long long is supported... yes checking for max C struct integer alignment... eight checking for max C struct floating point alignment... sixteen checking for max C struct alignment of structs with doubles... eight checking for max C struct floating point alignment with long doubles... sixteen configure: WARNING: Structures containing long doubles may be aligned differently from structures with floats or longs. MPICH does not handle this case automatically and you should avoid assumed extents for structures containing float types. checking if alignment of structs with doubles is based on position... no checking if alignment of structs with long long ints is based on position... no checking if double alignment breaks rules, find actual alignment... no checking for alignment restrictions on pointers... int or better checking size of char... 1 checking size of unsigned char... 1 checking size of short... 2 checking size of unsigned short... 2 checking size of int... 4 checking size of unsigned int... 4 checking size of long... 8 checking size of unsigned long... 8 checking size of long long... 8 checking size of unsigned long long... 8 checking size of float... 4 checking size of double... 8 checking size of long double... 16 checking size of void *... 8 checking for ANSI C header files... (cached) yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking size of wchar_t... 4 checking size of float_int... 8 checking size of double_int... 16 checking size of long_int... 16 checking size of short_int... 8 checking size of two_int... 8 checking size of long_double_int... 32 checking sys/bitypes.h usability... yes checking sys/bitypes.h presence... yes checking for sys/bitypes.h... yes checking for inttypes.h... (cached) yes checking for stdint.h... 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True is 1 and False is 0 checking for Fortran 90 integer kind for 8-byte integers... 8 checking for Fortran 90 integer kind for 4-byte integers... 4 checking if real*8 is supported in Fortran 90... yes checking size of bool... 1 checking complex usability... yes checking complex presence... yes checking for complex... yes checking size of Complex... 8 checking size of DoubleComplex... 16 checking size of LongDoubleComplex... 32 checking for alignment restrictions on int64_t... no checking for alignment restrictions on int32_t... no checking for gcc __asm__ and pentium cmpxchgl instruction... no checking for gcc __asm__ and AMD x86_64 cmpxchgq instruction... yes checking for gcc __asm__ and IA64 xchg4 instruction... no checking for gcov... gcov checking for ANSI C header files... (cached) yes checking for stdlib.h... (cached) yes checking stdarg.h usability... yes checking stdarg.h presence... yes checking for stdarg.h... yes checking for sys/types.h... 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(cached) yes checking for string.h... (cached) yes checking for stdlib.h... (cached) yes checking for sys/socket.h... (cached) yes checking for strings.h... (cached) yes checking for assert.h... (cached) yes checking arpa/inet.h usability... yes checking arpa/inet.h presence... yes checking for arpa/inet.h... yes checking for snprintf... (cached) yes checking whether snprintf needs a declaration... (cached) no checking for strncasecmp... (cached) yes checking for sys/types.h... (cached) yes checking for sys/param.h... (cached) yes checking for sys/socket.h... (cached) yes checking netinet/in.h usability... yes checking netinet/in.h presence... yes checking for netinet/in.h... yes checking netinet/tcp.h usability... yes checking netinet/tcp.h presence... yes checking for netinet/tcp.h... yes checking sys/un.h usability... yes checking sys/un.h presence... yes checking for sys/un.h... yes checking netdb.h usability... yes checking netdb.h presence... yes checking for netdb.h... yes checking for library containing socket... none required checking for library containing gethostbyname... none required checking for socket... yes checking for setsockopt... yes checking for gethostbyname... yes checking whether socklen_t is defined (in sys/socket.h if present)... yes checking whether struct hostent contains h_addr_list... yes checking whether __attribute__ allowed... (cached) yes checking whether __attribute__((format)) allowed... (cached) yes configure: RUNNING CONFIGURE FOR CH3 DEVICE checking for assert.h... (cached) yes checking for limits.h... (cached) yes checking for string.h... (cached) yes checking for sys/types.h... (cached) yes checking for sys/uio.h... (cached) yes checking uuid/uuid.h usability... yes checking uuid/uuid.h presence... yes checking for uuid/uuid.h... yes checking time.h usability... yes checking time.h presence... yes checking for time.h... yes checking ctype.h usability... yes checking ctype.h presence... yes checking for ctype.h... yes checking for unistd.h... (cached) yes checking for arpa/inet.h... (cached) yes checking for sys/socket.h... (cached) yes checking for net/if.h... yes checking for pid_t... yes checking for inet_pton... yes checking for gethostname... yes checking whether gethostname needs a declaration... no checking for CFUUIDCreate... no checking for uuid_generate... no checking for time... yes checking for OpenPA atomic primitive availability... yes checking whether byte ordering is bigendian... (cached) no configure: RUNNING CONFIGURE FOR ch3:nemesis checking for net/if.h... yes checking for assert.h... (cached) yes checking for netdb.h... (cached) yes checking for unistd.h... (cached) yes checking for sched.h... (cached) yes checking sys/mman.h usability... yes checking sys/mman.h presence... yes checking for sys/mman.h... yes checking sys/ioctl.h usability... yes checking sys/ioctl.h presence... yes checking for sys/ioctl.h... yes checking for sys/socket.h... (cached) yes checking sys/sockio.h usability... no checking sys/sockio.h presence... no checking for sys/sockio.h... no checking for sys/types.h... (cached) yes checking for errno.h... (cached) yes checking sys/ipc.h usability... yes checking sys/ipc.h presence... yes checking for sys/ipc.h... yes checking sys/shm.h usability... yes checking sys/shm.h presence... yes checking for sys/shm.h... yes checking for netinet/in.h... (cached) yes checking signal.h usability... yes checking signal.h presence... yes checking for signal.h... yes checking for signal... yes checking for mkstemp... (cached) yes checking for rand... yes checking for srand... yes checking for mmap... yes checking for munmap... yes configure: Using a memory-mapped file for shared memory checking whether struct hostent contains h_addr_list... (cached) yes checking whether we can use struct ifconf... yes checking whether we can use struct ifreq... yes checking knem_io.h usability... no checking knem_io.h presence... no checking for knem_io.h... no configure: ===== configuring src/mpi/romio ===== configure: running /bin/sh ../../../../mpich-3.1.3/src/mpi/romio/configure --disable-option-checking '--prefix=/usr/local/mpich-3.1.3_64_gcc' '--libdir=/usr/local/mpich-3.1.3_64_gcc/lib64' '--includedir=/usr/local/mpich-3.1.3_64_gcc/include64' 'CC=gcc' 'CXX=g++' 'F77=gfortran' 'FC=gfortran' 'CFLAGS=-m64 -O2' 'CXXFLAGS=-m64 -O2' 'FFLAGS=-m64 -O2' 'FCFLAGS=-m64 -O2' 'LDFLAGS=-m64 ' '--enable-f77' '--enable-fc' '--enable-cxx' '--enable-romio' '--enable-debuginfo' '--enable-smpcoll' '--enable-threads=runtime' '--with-thread-package=posix' '--enable-shared' 'CPPFLAGS=-DLinux -Dx86_64 -I/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/mpl/include -I/export2/src/mpich-3.1.3/mpich-3.1.3/src/mpl/include -I/export2/src/mpich-3.1.3/mpich-3.1.3/src/openpa/src -I/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/openpa/src -D_REENTRANT -I/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/mpi/romio/include' --cache-file=/dev/null --srcdir=../../../../ mpich-3.1.3/src/mpi/romio configure: loading site script /usr/share/site/x86_64-unknown-linux-gnu checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... yes checking for style of include used by make... GNU checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking the archiver (ar) interface... ar checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/local/bin/ld -m elf_x86_64 checking if the linker (/usr/local/bin/ld -m elf_x86_64) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/local/bin/nm -B checking the name lister (/usr/local/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format... func_convert_file_noop checking how to convert x86_64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/local/bin/ld -m elf_x86_64 option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/local/bin/nm -B output from gcc object... ok checking for sysroot... no checking for mt... mt checking if mt is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/local/bin/ld -m elf_x86_64 -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking whether make supports nested variables... (cached) yes Configuring with args dummy mt checking whether clock skew breaks make... no checking whether make supports include... yes checking whether make allows comments in actions... yes checking for virtual path format... VPATH checking whether make sets CFLAGS... yes checking for architecture... LINUX ROMIO home directory is ../../../../mpich-3.1.3/src/mpi/romio checking whether we are using the GNU Fortran 77 compiler... yes checking whether gfortran accepts -g... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... no checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/local/bin/ld -m elf_x86_64 -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether we are using the GNU Fortran compiler... yes checking whether gfortran accepts -g... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... no checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/local/bin/ld -m elf_x86_64 -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for long long... yes checking size of long long... 8 checking for memalign... yes checking Fortran external names Fortran externals have a trailing underscore and are lowercase checking for inline... inline checking for size_t... yes checking for ssize_t... yes checking for off_t... yes checking how to run the C preprocessor... gcc -E checking for unistd.h... (cached) yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking malloc.h usability... yes checking malloc.h presence... yes checking for malloc.h... yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking for sys/types.h... (cached) yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking time.h usability... yes checking time.h presence... yes checking for time.h... yes checking for mpix.h... no checking for u_char... yes checking for u_short... yes checking for u_int... yes checking for u_long... yes checking sys/attr.h usability... no checking sys/attr.h presence... no checking for sys/attr.h... no checking size of int... 4 checking size of void *... 8 checking for int large enough for pointers... no checking size of long long... (cached) 8 checking for extension for Fortran 90 programs... f90 checking for Fortran 90 KIND parameter for 8-byte integers... 8 checking that we can use integer*8 to declare MPI_DISPLACMENT_CURRENT... yes Overriding Array test for MPICH checking for type of weak symbol alias support... pragma weak checking whether __attribute__ ((weak)) allowed... yes checking whether __attribute__ ((weak_import)) allowed... yes checking whether __attribute__((weak,alias(...))) allowed... yes checking for multiple weak symbol support... yes checking whether struct flock compatible with MPI_Offset... yes checking for pvfs2-config... notfound checking configured file systems... testfs ufs nfs configure: WARNING: File locks may not work with NFS. See the Installation and users manual for instructions on testing and if necessary fixing this checking gpfs.h usability... no checking gpfs.h presence... no checking for gpfs.h... no checking gpfs_fcntl.h usability... no checking gpfs_fcntl.h presence... no checking for gpfs_fcntl.h... no checking for library containing aio_write... -lrt checking signal.h usability... yes checking signal.h presence... yes checking for signal.h... yes checking if aio.h exists and can be compiled... yes checking if sys/aio.h exists and can be compiled... no checking whether aio routines can be used... yes checking for obsolete two-argument aio_write... no checking for obsolete two-argument aio_suspend... no checking for aio_fildes member of aiocb structure... yes checking for aio_whence member of aiocb structure... no checking for aio_handle member of aiocb structure... no checking for aio_reqprio member of aiocb structure... yes checking for aio_sigevent member of aiocb structure... yes checking sys/vfs.h usability... yes checking sys/vfs.h presence... yes checking for sys/vfs.h... yes checking sys/param.h usability... yes checking sys/param.h presence... yes checking for sys/param.h... yes checking sys/mount.h usability... yes checking sys/mount.h presence... yes checking for sys/mount.h... yes checking sys/statvfs.h usability... yes checking sys/statvfs.h presence... yes checking for sys/statvfs.h... yes checking for statfs... yes checking whether struct statfs properly defined... yes checking for f_fstypename member of statfs structure... no checking for sys/stat.h... (cached) yes checking for sys/types.h... (cached) yes checking for unistd.h... (cached) yes checking for stat... yes checking for st_fstype member of stat structure... no checking for sys/types.h... (cached) yes checking for sys/statvfs.h... (cached) yes checking for sys/vfs.h... (cached) yes checking for statvfs... yes checking for f_basetype member of statvfs structure... no checking for blksize_t... yes checking for unistd.h... (cached) yes checking for large file defines... yes checking whether off64_t is an scalar type... yes checking for strerror... yes checking for doctext... false checking for strdup... yes checking whether strdup needs a declaration... no checking for snprintf... yes checking whether snprintf needs a declaration... no checking for lstat... yes checking whether lstat needs a declaration... yes checking for readlink... yes checking whether readlink needs a declaration... no checking for fsync... yes checking whether fsync needs a declaration... no checking for ftruncate... yes checking whether ftruncate needs a declaration... no checking for lseek64... yes checking whether lseek64 needs a declaration... no checking for usleep... yes checking whether usleep needs a declaration... no checking for unistd.h... (cached) yes checking for large file defines... yes setting SYSDEP_INC to checking for C/C++ restrict keyword... __restrict checking whether __attribute__ allowed... yes checking whether __attribute__((format)) allowed... yes checking for gcov... gcov setting CC to gcc setting F77 to gfortran setting TEST_CC to $(bindir)/mpicc setting TEST_F77 to $(bindir)/mpifort setting CFLAGS to -m64 -O2 -DFORTRANUNDERSCORE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_ROMIOCONF_H -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 setting USER_CFLAGS to setting USER_FFLAGS to checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating localdefs config.status: creating mpi2-other/info/Makefile config.status: creating mpi2-other/array/Makefile config.status: creating test/Makefile config.status: creating test/misc.c config.status: creating test/large_file.c config.status: creating test/runtests config.status: creating test-internal/Makefile config.status: creating util/romioinstall config.status: creating include/mpio.h config.status: creating include/mpiof.h config.status: creating mpi2-other/info/fortran/Makefile config.status: creating mpi2-other/array/fortran/Makefile config.status: creating test/fmisc.f config.status: creating test/fcoll_test.f config.status: creating test/pfcoll_test.f config.status: creating test/fperf.f config.status: creating adio/include/romioconf.h config.status: executing depfiles commands config.status: executing libtool commands config.status: executing default-1 commands configure: ===== done with src/mpi/romio configure ===== configure: sourcing src/mpi/romio/localdefs configure: ===== configuring src/pm/hydra ===== configure: running /bin/sh ../../../../mpich-3.1.3/src/pm/hydra/configure --disable-option-checking '--prefix=/usr/local/mpich-3.1.3_64_gcc' '--libdir=/usr/local/mpich-3.1.3_64_gcc/lib64' '--includedir=/usr/local/mpich-3.1.3_64_gcc/include64' 'CC=gcc' 'CXX=g++' 'F77=gfortran' 'FC=gfortran' 'CFLAGS=-m64 -O2' 'CXXFLAGS=-m64 -O2' 'FFLAGS=-m64 -O2' 'FCFLAGS=-m64 -O2' 'LDFLAGS=-m64 ' '--enable-f77' '--enable-fc' '--enable-cxx' '--enable-romio' '--enable-debuginfo' '--enable-smpcoll' '--enable-threads=runtime' '--with-thread-package=posix' '--enable-shared' 'CPPFLAGS=-DLinux -Dx86_64 -I/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/mpl/include -I/export2/src/mpich-3.1.3/mpich-3.1.3/src/mpl/include -I/export2/src/mpich-3.1.3/mpich-3.1.3/src/openpa/src -I/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/openpa/src -D_REENTRANT -I/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/mpi/romio/include' --cache-file=/dev/null --srcdir=../../../../m pich-3.1.3/src/pm/hydra configure: loading site script /usr/share/site/x86_64-unknown-linux-gnu checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking target system type... x86_64-unknown-linux-gnu checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking minix/config.h usability... no checking minix/config.h presence... no checking for minix/config.h... no checking whether it is safe to define __EXTENSIONS__... yes checking for fgrep... /bin/grep -F checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking for style of include used by make... GNU checking whether make supports nested variables... yes checking dependency style of gcc... gcc3 checking the archiver (ar) interface... ar checking whether make supports nested variables... (cached) yes checking for doctext... false checking for an ANSI C-conforming const... yes checking for working volatile... yes checking for C/C++ restrict keyword... __restrict checking for inline... inline checking size of unsigned long... 8 checking for size_t... yes checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for ld used by gcc... /usr/local/bin/ld -m elf_x86_64 checking if the linker (/usr/local/bin/ld -m elf_x86_64) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/local/bin/nm -B checking the name lister (/usr/local/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format... func_convert_file_noop checking how to convert x86_64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/local/bin/ld -m elf_x86_64 option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/local/bin/nm -B output from gcc object... ok checking for sysroot... no checking for mt... mt checking if mt is a manifest tool... no checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/local/bin/ld -m elf_x86_64 -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for variable argument list macro functionality... yes checking whether __attribute__ allowed... yes checking whether __attribute__((format)) allowed... yes checking whether the compiler defines __func__... yes checking whether the compiler defines __FUNC__... no checking whether the compiler sets __FUNCTION__... yes checking for doxygen... /usr/bin/doxygen checking for gcov... gcov checking for ANSI C header files... (cached) yes checking for unistd.h... (cached) yes checking for strings.h... (cached) yes checking for sys/types.h... (cached) yes checking sys/socket.h usability... yes checking sys/socket.h presence... yes checking for sys/socket.h... yes checking sched.h usability... yes checking sched.h presence... yes checking for sched.h... yes checking for sys/stat.h... (cached) yes checking sys/param.h usability... yes checking sys/param.h presence... yes checking for sys/param.h... yes checking netinet/in.h usability... yes checking netinet/in.h presence... yes checking for netinet/in.h... yes checking netinet/tcp.h usability... yes checking netinet/tcp.h presence... yes checking for netinet/tcp.h... yes checking sys/un.h usability... yes checking sys/un.h presence... yes checking for sys/un.h... yes checking netdb.h usability... yes checking netdb.h presence... yes checking for netdb.h... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking time.h usability... yes checking time.h presence... yes checking for time.h... yes checking ifaddrs.h usability... yes checking ifaddrs.h presence... yes checking for ifaddrs.h... yes checking arpa/inet.h usability... yes checking arpa/inet.h presence... yes checking for arpa/inet.h... yes checking poll.h usability... yes checking poll.h presence... yes checking for poll.h... yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking for netdb.h... (cached) yes checking winsock2.h usability... no checking winsock2.h presence... no checking for winsock2.h... no checking windows.h usability... no checking windows.h presence... no checking for windows.h... no checking for library containing socket... none required checking for library containing gethostbyname... none required checking for library containing hstrerror... none required checking for gettimeofday... yes checking for time... yes checking for strdup... yes checking for sigaction... yes checking for signal... yes checking for usleep... yes checking for alloca... no checking for unsetenv... yes checking for strerror... yes checking for strsignal... yes checking for stat... yes checking for fcntl... yes checking for alarm... yes checking for isatty... yes checking for inet_ntop... yes checking for getpgid... yes checking for setsid... yes checking for killpg... yes checking whether gettimeofday needs a declaration... no checking whether getpgid needs a declaration... no checking whether killpg needs a declaration... no checking for environ in unistd.h... yes checking bootstrap server... user,ssh,rsh,fork,slurm,ll,lsf,sge,pbs,cobalt,manual,persist checking tm.h usability... no checking tm.h presence... no checking for tm.h... no checking for tm_init in -ltorque... no checking process manager... pmiserv checking user interface... mpich checking desired processor topology libraries... hwloc checking for pkg-config... /usr/local/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for X... libraries , headers ### ### Configuring hwloc core ### checking hwloc building mode... embedded configure: hwloc builddir: /export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/pm/hydra/tools/topo/hwloc/hwloc configure: hwloc srcdir: /export2/src/mpich-3.1.3/mpich-3.1.3/src/pm/hydra/tools/topo/hwloc/hwloc configure: Detected VPATH build checking if want hwloc maintainer support... disabled (embedded mode) checking for hwloc directory prefix... tools/topo/hwloc/hwloc/ checking for hwloc symbol prefix... hwloc_ checking size of void *... 8 checking which OS support to include... Linux checking which CPU support to include... x86_64 checking size of unsigned long... (cached) 8 checking size of unsigned int... 4 checking for the C compiler vendor... gnu checking for __attribute__... yes checking for __attribute__(aligned)... yes checking for __attribute__(always_inline)... yes checking for __attribute__(cold)... yes checking for __attribute__(const)... yes checking for __attribute__(deprecated)... yes checking for __attribute__(format)... yes checking for __attribute__(hot)... yes checking for __attribute__(malloc)... yes checking for __attribute__(may_alias)... yes checking for __attribute__(no_instrument_function)... yes checking for __attribute__(nonnull)... yes checking for __attribute__(noreturn)... yes checking for __attribute__(packed)... yes checking for __attribute__(pure)... yes checking for __attribute__(sentinel)... yes checking for __attribute__(unused)... yes checking for __attribute__(warn_unused_result)... yes checking for __attribute__(weak_alias)... yes checking if gcc supports -fvisibility=hidden... yes checking whether to enable symbol visibility... yes (via -fvisibility=hidden) configure: WARNING: "-fvisibility=hidden" has been added to the hwloc CFLAGS checking whether the C compiler rejects function calls with too many arguments... yes checking whether the C compiler rejects function calls with too few arguments... yes checking for unistd.h... (cached) yes checking dirent.h usability... yes checking dirent.h presence... yes checking for dirent.h... yes checking for strings.h... (cached) yes checking for strncasecmp... yes checking whether function strncasecmp is declared... yes checking for strftime... yes checking for setlocale... yes checking for stdint.h... (cached) yes checking sys/mman.h usability... yes checking sys/mman.h presence... yes checking for sys/mman.h... yes checking for KAFFINITY... no checking for PROCESSOR_CACHE_TYPE... no checking for CACHE_DESCRIPTOR... no checking for LOGICAL_PROCESSOR_RELATIONSHIP... no checking for RelationProcessorPackage... no checking for SYSTEM_LOGICAL_PROCESSOR_INFORMATION... no checking for GROUP_AFFINITY... no checking for PROCESSOR_RELATIONSHIP... no checking for NUMA_NODE_RELATIONSHIP... no checking for CACHE_RELATIONSHIP... no checking for PROCESSOR_GROUP_INFO... no checking for GROUP_RELATIONSHIP... no checking for SYSTEM_LOGICAL_PROCESSOR_INFORMATION_EX... no checking for PSAPI_WORKING_SET_EX_BLOCK... no checking for PSAPI_WORKING_SET_EX_INFORMATION... no checking for main in -lgdi32... no checking for windows.h... (cached) no checking sys/lgrp_user.h usability... no checking sys/lgrp_user.h presence... no checking for sys/lgrp_user.h... no checking kstat.h usability... no checking kstat.h presence... no checking for kstat.h... no checking whether fabsf is declared... yes checking for fabsf in -lm... yes checking picl.h usability... no checking picl.h presence... no checking for picl.h... no checking whether _SC_NPROCESSORS_ONLN is declared... yes checking whether _SC_NPROCESSORS_CONF is declared... yes checking whether _SC_NPROC_ONLN is declared... no checking whether _SC_NPROC_CONF is declared... no checking whether _SC_PAGESIZE is declared... yes checking whether _SC_PAGE_SIZE is declared... yes checking whether _SC_LARGE_PAGESIZE is declared... no checking mach/mach_host.h usability... no checking mach/mach_host.h presence... no checking for mach/mach_host.h... no checking mach/mach_init.h usability... no checking mach/mach_init.h presence... no checking for mach/mach_init.h... no checking for sys/param.h... (cached) yes checking for sys/sysctl.h... yes checking whether CTL_HW is declared... no checking whether HW_NCPU is declared... no checking whether strtoull is declared... yes checking for pthread_t... yes checking whether function sched_setaffinity is declared... yes checking for old prototype of sched_setaffinity... no checking for working CPU_SET... yes checking for working CPU_SET_S... yes checking for working _syscall3... no checking for KERRIGHED... no checking for lib... no checking for bash... /bin/sh checking for ffs... yes checking whether function ffs is declared... yes checking for ffsl... yes checking whether function ffsl is declared... yes checking for fls... no checking for flsl... no checking for clz... no checking for clzl... no checking for openat... yes checking malloc.h usability... yes checking malloc.h presence... yes checking for malloc.h... yes checking for getpagesize... yes checking for memalign... yes checking for posix_memalign... yes checking sys/utsname.h usability... yes checking sys/utsname.h presence... yes checking for sys/utsname.h... yes checking for uname... yes checking pthread_np.h usability... no checking pthread_np.h presence... no checking for pthread_np.h... no checking whether pthread_setaffinity_np is declared... yes checking whether pthread_getaffinity_np is declared... yes checking for sched_setaffinity... yes checking for sys/cpuset.h... no checking for cpuset_setaffinity... no checking for library containing pthread_getthrds_np... no checking for cpuset_setid... no checking numaif.h usability... yes checking numaif.h presence... yes checking for numaif.h... yes checking for numa_available in -lnuma... yes checking for set_mempolicy in -lnuma... yes checking for mbind in -lnuma... yes checking for migrate_pages in -lnuma... yes checking for PCIACCESS... yes checking for pci_slot_match_iterator_create... yes checking for final PCIACCESS support... yes checking CL/cl_ext.h usability... no checking CL/cl_ext.h presence... no checking for CL/cl_ext.h... no checking cuda.h usability... no checking cuda.h presence... no checking for cuda.h... no checking cuda_runtime_api.h usability... no checking cuda_runtime_api.h presence... no checking for cuda_runtime_api.h... no checking nvml.h usability... no checking nvml.h presence... no checking for nvml.h... no checking for gethostbyname... yes checking for connect... yes checking for remove... yes checking for shmat... yes checking for IceConnectionNumber in -lICE... yes checking X11/Xlib.h usability... yes checking X11/Xlib.h presence... yes checking for X11/Xlib.h... yes checking for XOpenDisplay in -lX11... yes checking X11/Xutil.h usability... yes checking X11/Xutil.h presence... yes checking for X11/Xutil.h... yes checking X11/keysym.h usability... yes checking X11/keysym.h presence... yes checking for X11/keysym.h... yes checking NVCtrl/NVCtrl.h usability... no checking NVCtrl/NVCtrl.h presence... no checking for NVCtrl/NVCtrl.h... no checking for LIBXML2... yes checking for xmlNewDoc... yes checking for final LIBXML2 support... yes checking for x86 cpuid... yes checking for pthread_mutex_lock... yes checking if plugin support is enabled... no checking components to build statically... noos xml synthetic custom xml_nolibxml linux linuxpci pci xml_libxml x86 checking components to build as plugins... checking available processor topology libraries... hwloc checking pthread.h usability... yes checking pthread.h presence... yes checking for pthread.h... yes checking for pthread_key_create in -lpthread... yes checking checkpointing library... blcr checking libcr.h usability... no checking libcr.h presence... no checking for libcr.h... no checking for cr_init in -lcr... no checking demux engine... poll,select,port checking for poll... yes checking for select... yes checking debugging support... none checking error checking... yes checking warnings... no checking profiling... yes checking libftb.h usability... no checking libftb.h presence... no checking for libftb.h... no checking for FTB_Connect in -lftb... no checking for strsignal... (cached) yes checking whether strsignal needs a declaration... no checking for sigaction... (cached) yes checking for signal... (cached) yes checking for sigset... yes checking for struct sigaction and sa_handler... yes checking for gethostname... yes checking whether gethostname needs a declaration... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating tools/topo/hwloc/hwloc/Makefile config.status: creating tools/topo/hwloc/hwloc/include/Makefile config.status: creating tools/topo/hwloc/hwloc/src/Makefile config.status: creating Makefile config.status: creating tools/bootstrap/src/bsci_init.c config.status: creating hydra-doxygen.cfg config.status: creating include/hydra_config.h config.status: creating tools/topo/hwloc/hwloc/include/private/autogen/config.h config.status: creating tools/topo/hwloc/hwloc/include/hwloc/autogen/config.h config.status: executing depfiles commands config.status: executing libtool commands configure: ===== done with src/pm/hydra configure ===== checking size of OPA_ptr_t... 8 checking the sizeof MPI_Offset... 8 checking whether the Fortran Offset type works with Fortran 77... yes checking whether the Fortran Offset type works with Fortran 90... yes checking for size of MPI_Status... 20 checking for BSD/POSIX style global symbol lister... BSD style,/usr/local/bin/nm -g -B checking stdio.h usability... yes checking stdio.h presence... yes checking for stdio.h... yes checking for multiple __attribute__((alias)) support... yes checking the minimum alignment of Fortran common block of 1 integers... 16 checking the minimum alignment of Fortran common block of 5 integers... 16, too small! reset to 32 configure: WARNING: The ch3 device did not set the maximum size of an error string, 512 being used. configure: creating ./config.lt config.lt: creating libtool checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating src/binding/fortran/use_mpi/mpif90model.h config.status: creating src/mpid/ch3/channels/nemesis/include/mpid_nem_net_module_defs.h config.status: creating src/mpid/ch3/channels/nemesis/src/mpid_nem_net_array.c config.status: creating Makefile config.status: creating examples/Makefile config.status: creating test/Makefile config.status: creating test/commands/Makefile config.status: creating src/include/mpichinfo.h config.status: creating mpich-doxygen config.status: creating src/include/glue_romio.h config.status: creating src/include/mpichtimer.h config.status: creating src/binding/cxx/mpicxx.h config.status: creating src/binding/fortran/mpif_h/mpif.h config.status: creating src/binding/fortran/mpif_h/setbotf.f config.status: creating src/binding/fortran/mpif_h/setbot.c config.status: creating src/binding/fortran/use_mpi/mpi_sizeofs.f90 config.status: creating src/binding/fortran/use_mpi/mpi_base.f90 config.status: creating src/binding/fortran/use_mpi/mpi_constants.f90 config.status: creating src/packaging/pkgconfig/mpich.pc config.status: creating src/packaging/envmods/mpich.module config.status: WARNING: '../mpich-3.1.3/src/packaging/envmods/mpich.module.in' seems to ignore the --datarootdir setting config.status: creating src/env/mpixxx_opts.conf config.status: creating src/env/mpicc.sh config.status: creating src/env/mpicc.bash config.status: creating src/env/mpicxx.sh config.status: creating src/env/mpicxx.bash config.status: creating src/env/mpif77.sh config.status: creating src/env/mpif77.bash config.status: creating src/env/mpifort.sh config.status: creating src/env/mpifort.bash config.status: creating src/env/parkill config.status: creating src/util/dbg/getfuncstack config.status: creating src/include/mpi.h config.status: creating doc/design/Makefile config.status: creating doc/installguide/Makefile config.status: creating doc/logging/Makefile config.status: creating doc/refman/Makefile config.status: creating doc/userguide/Makefile config.status: creating test/commands/cmdtests config.status: creating src/include/mpichconf.h config.status: executing depfiles commands config.status: executing libtool commands config.status: executing default-1 commands config.status: executing default-2 commands config.status: executing default-3 commands config.status: executing default-4 commands config.status: executing default-5 commands === configuring in test/mpi (/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/test/mpi) configure: running /bin/sh ../../../mpich-3.1.3/test/mpi/configure --disable-option-checking '--prefix=/usr/local/mpich-3.1.3_64_gcc' '--libdir=/usr/local/mpich-3.1.3_64_gcc/lib64' '--includedir=/usr/local/mpich-3.1.3_64_gcc/include64' 'CC=gcc' 'CXX=g++' 'F77=gfortran' 'FC=gfortran' 'CFLAGS=-m64' 'CXXFLAGS=-m64' 'FFLAGS=-m64' 'FCFLAGS=-m64' 'LDFLAGS=-m64' '--enable-f77' '--enable-fc' '--enable-cxx' '--enable-romio' '--enable-debuginfo' '--enable-smpcoll' '--enable-threads=runtime' '--with-thread-package=posix' '--enable-shared' 'CPPFLAGS=-DLinux -Dx86_64' --cache-file=/dev/null --srcdir=../../../mpich-3.1.3/test/mpi configure: loading site script /usr/share/site/x86_64-unknown-linux-gnu RUNNING CONFIGURE FOR MPI TESTS checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... yes checking whether make supports nested variables... (cached) yes checking for make... make checking whether clock skew breaks make... no checking whether make supports include... yes checking whether make allows comments in actions... yes checking for virtual path format... VPATH checking whether make sets CFLAGS... yes checking for style of include used by make... GNU checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking whether long double is supported... yes checking whether long long is supported... yes checking for an ANSI C-conforming const... yes checking for C/C++ restrict keyword... __restrict checking for ranlib... ranlib checking the archiver (ar) interface... ar checking for grep that handles long lines and -e... /bin/grep checking for fgrep... /bin/grep -F checking how to run the C preprocessor... gcc -E checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking stdarg.h usability... yes checking stdarg.h presence... yes checking for stdarg.h... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking sys/resource.h usability... yes checking sys/resource.h presence... yes checking for sys/resource.h... yes checking for int8_t... yes checking for int16_t... yes checking for int32_t... yes checking for int64_t... yes checking for uint8_t... yes checking for uint16_t... yes checking for uint32_t... yes checking for uint64_t... yes checking for _Bool... yes checking for float _Complex... yes checking for double _Complex... yes checking for long double _Complex... yes checking size of void *... 8 checking for library containing socket... none required checking for library containing gethostbyname... none required checking pthread.h usability... yes checking pthread.h presence... yes checking for pthread.h... yes checking for library containing pthread_create... -lpthread checking for library containing pthread_barrier_init... none required checking for pthread_create... yes checking for pthread_yield... yes checking for pthread_barrier_init... yes checking for pthread_barrier_wait... yes checking whether struct hostent contains h_addr_list... yes checking for getrusage... yes checking whether we are using the GNU Fortran 77 compiler... yes checking whether gfortran accepts -g... yes checking whether integer*4 is supported... yes checking whether integer*8 is supported... yes checking whether integer*16 is supported... yes checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking how to get verbose linking output from gfortran... -v checking for Fortran 77 libraries of gfortran... -L/usr/local/gcc-4.9.1/lib/gcc/x86_64-unknown-linux-gnu/4.9.1 -L/usr/local/gcc-4.9.1/lib/gcc/x86_64-unknown-linux-gnu/4.9.1/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/local/gcc-4.9.1/lib/gcc/x86_64-unknown-linux-gnu/4.9.1/../../.. -lpthread -lgfortran -lm -lquadmath checking for Fortran 77 name mangling... lower uscore checking whether gfortran allows mismatched arguments... yes checking for Fortran libraries needed for getarg... none needed checking whether Fortran 77 supports Cray-style pointer... yes checking for Fortran 77 compiler flag for Cray-style pointer... -fcray-pointer checking whether we are using the GNU Fortran compiler... yes checking whether gfortran accepts -g... yes checking for extension for Fortran 90 programs... f90 checking whether the Fortran 90 compiler (gfortran -m64 ) works... yes checking whether the Fortran 90 compiler (gfortran -m64 ) is a cross-compiler... no checking for Fortran flag needed to accept free-form source... none checking whether Fortran 90 supports Cray-style pointer... yes checking for Fortran 90 compiler flag for Cray-style pointer... -fcray-pointer checking whether gfortran supports the Fortran 2003 routines to access the commandline... yes checking for Fortran 90 module extension... mod checking for Fortran 90 module include flag... -I checking for Fortran 90 module output directory flag... -J checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... gcc3 checking whether <iostream> available... yes checking whether the compiler implements namespaces... yes checking whether the compiler implements the namespace std... yes checking whether MPI_2DOUBLE_COMPLEX is available... no checking whether MPI_2COMPLEX is available... no checking size of void *... (cached) 8 checking size of int... 4 checking size of long... 8 checking size of long long... 8 checking size of short... 2 checking for C integer type of address size... long checking for perl... /usr/bin/perl checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating maint/testmerge config.status: creating runtests config.status: creating checktests config.status: creating Makefile config.status: creating basic/Makefile config.status: creating attr/Makefile config.status: creating util/Makefile config.status: creating coll/Makefile config.status: creating comm/Makefile config.status: creating datatype/Makefile config.status: creating datatype/testlist config.status: creating errhan/Makefile config.status: creating group/Makefile config.status: creating info/Makefile config.status: creating init/Makefile config.status: creating pt2pt/Makefile config.status: creating mpi_t/Makefile config.status: creating rma/Makefile config.status: creating rma/testlist config.status: creating spawn/Makefile config.status: creating topo/Makefile config.status: creating io/Makefile config.status: creating f77/Makefile config.status: creating f77/attr/Makefile config.status: creating f77/attr/attraints.h config.status: creating f77/pt2pt/attr1aints.h config.status: creating f77/ext/add1size.h config.status: creating f77/datatype/Makefile config.status: creating f77/datatype/typeaints.h config.status: creating f77/util/Makefile config.status: creating f77/coll/Makefile config.status: creating f77/comm/Makefile config.status: creating f77/topo/Makefile config.status: creating f77/init/Makefile config.status: creating f77/rma/addsize.h config.status: creating f77/pt2pt/Makefile config.status: creating f77/info/Makefile config.status: creating f77/spawn/Makefile config.status: creating f77/spawn/testlist config.status: creating f77/spawn/type1aint.h config.status: creating f77/rma/Makefile config.status: creating f77/ext/Makefile config.status: creating f77/ext/testlist config.status: creating f77/io/Makefile config.status: creating f77/io/iooffset.h config.status: creating f77/io/iodisp.h config.status: creating f77/io/ioaint.h config.status: creating f77/profile/Makefile config.status: creating f90/Makefile config.status: creating f90/attr/Makefile config.status: creating f90/datatype/Makefile config.status: creating f90/f90types/Makefile config.status: creating f90/util/Makefile config.status: creating f90/coll/Makefile config.status: creating f90/comm/Makefile config.status: creating f90/topo/Makefile config.status: creating f90/init/Makefile config.status: creating f90/pt2pt/Makefile config.status: creating f90/rma/Makefile config.status: creating f90/info/Makefile config.status: creating f90/spawn/Makefile config.status: creating f90/spawn/testlist config.status: creating f90/timer/Makefile config.status: creating f90/ext/Makefile config.status: creating f90/ext/testlist config.status: creating f90/io/Makefile config.status: creating f90/misc/Makefile config.status: creating f90/profile/Makefile config.status: creating f08/Makefile config.status: creating f08/attr/Makefile config.status: creating f08/datatype/Makefile config.status: creating f08/util/Makefile config.status: creating f08/coll/Makefile config.status: creating f08/comm/Makefile config.status: creating f08/pt2pt/Makefile config.status: creating f08/rma/Makefile config.status: creating f08/subarray/Makefile config.status: creating f08/topo/Makefile config.status: creating f08/io/Makefile config.status: creating f08/init/Makefile config.status: creating f08/info/Makefile config.status: creating f08/spawn/Makefile config.status: creating f08/timer/Makefile config.status: creating f08/ext/Makefile config.status: creating f08/misc/Makefile config.status: creating f08/profile/Makefile config.status: creating cxx/Makefile config.status: creating cxx/util/Makefile config.status: creating cxx/attr/Makefile config.status: creating cxx/pt2pt/Makefile config.status: creating cxx/comm/Makefile config.status: creating cxx/coll/Makefile config.status: creating cxx/errhan/Makefile config.status: creating cxx/info/Makefile config.status: creating cxx/datatype/Makefile config.status: creating cxx/io/Makefile config.status: creating cxx/init/Makefile config.status: creating cxx/rma/Makefile config.status: creating cxx/spawn/Makefile config.status: creating cxx/topo/Makefile config.status: creating threads/Makefile config.status: creating threads/pt2pt/Makefile config.status: creating threads/util/Makefile config.status: creating threads/comm/Makefile config.status: creating threads/init/Makefile config.status: creating threads/mpi_t/Makefile config.status: creating threads/spawn/Makefile config.status: creating threads/rma/Makefile config.status: creating errors/Makefile config.status: creating errors/attr/Makefile config.status: creating errors/basic/Makefile config.status: creating errors/coll/Makefile config.status: creating errors/comm/Makefile config.status: creating errors/datatype/Makefile config.status: creating errors/faults/Makefile config.status: creating errors/group/Makefile config.status: creating errors/pt2pt/Makefile config.status: creating errors/rma/Makefile config.status: creating errors/spawn/Makefile config.status: creating errors/topo/Makefile config.status: creating errors/io/Makefile config.status: creating errors/cxx/Makefile config.status: creating errors/cxx/errhan/Makefile config.status: creating errors/cxx/io/Makefile config.status: creating errors/f77/Makefile config.status: creating errors/f77/io/Makefile config.status: creating errors/f77/io/addsize.h config.status: creating errors/f77/io/iooffset.h config.status: creating errors/f90/Makefile config.status: creating errors/f90/io/Makefile config.status: creating errors/f08/Makefile config.status: creating errors/f08/io/Makefile config.status: creating ckpoint/Makefile config.status: creating ft/Makefile config.status: creating manual/Makefile config.status: creating manual/manyconnect config.status: creating manual/mpi_t/Makefile config.status: creating perf/Makefile config.status: creating testlist config.status: creating cxx/testlist config.status: creating cxx/topo/testlist config.status: creating f77/testlist config.status: creating f90/testlist config.status: creating threads/testlist config.status: creating errors/testlist config.status: creating errors/cxx/testlist config.status: creating errors/f77/testlist config.status: creating errors/f90/testlist config.status: creating impls/testlist config.status: creating impls/Makefile config.status: creating impls/hydra/Makefile config.status: creating impls/hydra/proc_binding.sh config.status: creating impls/mpich/Makefile config.status: creating impls/mpich/testlist config.status: creating impls/mpich/mpi_t/Makefile config.status: creating include/mpitestconf.h config.status: executing depfiles commands config.status: executing default-1 commands config.status: executing default-2 commands config.status: executing default-3 commands config.status: executing default-4 commands Configuration completed. if test ! -h ./src/include/mpio.h ; then \ rm -f ./src/include/mpio.h ; \ ( cd ./src/include && \ ln -s ../mpi/romio/include/mpio.h ) ; \ fi make all-recursive make[1]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc' Making all in /export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/mpl make[2]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/mpl' CC src/mplstr.lo CC src/mpltrmem.lo CC src/mplenv.lo CC src/mplsock.lo CCLD libmpl.la libtool: link: warning: `-version-info/-version-number' is ignored for convenience libraries make[2]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/mpl' Making all in /export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/openpa make[2]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/openpa' Making all in src make[3]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/openpa/src' make all-am make[4]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/openpa/src' CC opa_primitives.lo CC opa_queue.lo CCLD libopa.la libtool: link: warning: `-version-info/-version-number' is ignored for convenience libraries make[4]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/openpa/src' make[3]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/openpa/src' Making all in test make[3]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/openpa/test' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/openpa/test' make[3]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/openpa' make[3]: Nothing to be done for `all-am'. make[3]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/openpa' make[2]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/openpa' Making all in src/mpi/romio make[2]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/mpi/romio' make[3]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/mpi/romio' CC mpi-io/close.lo CC mpi-io/delete.lo CC mpi-io/file_c2f.lo CC mpi-io/file_f2c.lo CC mpi-io/fsync.lo CC mpi-io/get_amode.lo CC mpi-io/get_atom.lo CC mpi-io/get_bytoff.lo CC mpi-io/get_extent.lo CC mpi-io/get_group.lo CC mpi-io/get_info.lo CC mpi-io/get_posn.lo CC mpi-io/get_posn_sh.lo CC mpi-io/get_size.lo CC mpi-io/get_view.lo CC mpi-io/iread.lo CC mpi-io/iread_at.lo CC mpi-io/iread_sh.lo CC mpi-io/iwrite.lo CC mpi-io/iwrite_at.lo CC mpi-io/iwrite_sh.lo CC mpi-io/open.lo CC mpi-io/prealloc.lo CC mpi-io/rd_atallb.lo CC mpi-io/rd_atalle.lo CC mpi-io/read.lo CC mpi-io/read_all.lo CC mpi-io/read_allb.lo CC mpi-io/read_alle.lo CC mpi-io/read_at.lo CC mpi-io/read_atall.lo CC mpi-io/read_ord.lo CC mpi-io/read_ordb.lo CC mpi-io/read_orde.lo CC mpi-io/read_sh.lo CC mpi-io/register_datarep.lo CC mpi-io/seek.lo CC mpi-io/seek_sh.lo CC mpi-io/set_atom.lo CC mpi-io/set_info.lo CC mpi-io/set_size.lo CC mpi-io/set_view.lo CC mpi-io/wr_atallb.lo CC mpi-io/wr_atalle.lo CC mpi-io/write.lo CC mpi-io/write_all.lo CC mpi-io/write_allb.lo CC mpi-io/write_alle.lo CC mpi-io/write_at.lo CC mpi-io/write_atall.lo CC mpi-io/write_ord.lo CC mpi-io/write_ordb.lo CC mpi-io/write_orde.lo CC mpi-io/write_sh.lo CC mpi-io/glue/mpich/mpio_file.lo CC mpi-io/glue/mpich/mpio_err.lo CC mpi-io/mpich_fileutil.lo CC mpi-io/mpir-mpioinit.lo CC mpi-io/mpiu_greq.lo CC mpi-io/mpiu_external32.lo CC adio/ad_nfs/ad_nfs_read.lo CC adio/ad_nfs/ad_nfs_open.lo CC adio/ad_nfs/ad_nfs_write.lo CC adio/ad_nfs/ad_nfs_done.lo CC adio/ad_nfs/ad_nfs_fcntl.lo CC adio/ad_nfs/ad_nfs_iread.lo CC adio/ad_nfs/ad_nfs_iwrite.lo CC adio/ad_nfs/ad_nfs_wait.lo CC adio/ad_nfs/ad_nfs_setsh.lo CC adio/ad_nfs/ad_nfs_getsh.lo CC adio/ad_nfs/ad_nfs.lo CC adio/ad_nfs/ad_nfs_resize.lo CC adio/ad_nfs/ad_nfs_features.lo CC adio/ad_testfs/ad_testfs_close.lo CC adio/ad_testfs/ad_testfs_read.lo CC adio/ad_testfs/ad_testfs_rdcoll.lo CC adio/ad_testfs/ad_testfs_wrcoll.lo CC adio/ad_testfs/ad_testfs_open.lo CC adio/ad_testfs/ad_testfs_write.lo CC adio/ad_testfs/ad_testfs_done.lo CC adio/ad_testfs/ad_testfs_fcntl.lo CC adio/ad_testfs/ad_testfs_iread.lo CC adio/ad_testfs/ad_testfs_iwrite.lo CC adio/ad_testfs/ad_testfs_wait.lo CC adio/ad_testfs/ad_testfs_flush.lo CC adio/ad_testfs/ad_testfs_seek.lo CC adio/ad_testfs/ad_testfs_resize.lo CC adio/ad_testfs/ad_testfs_hints.lo CC adio/ad_testfs/ad_testfs_delete.lo CC adio/ad_testfs/ad_testfs.lo CC adio/ad_ufs/ad_ufs.lo CC adio/ad_ufs/ad_ufs_open.lo CC adio/common/ad_aggregate.lo CC adio/common/ad_aggregate_new.lo CC adio/common/ad_close.lo CC adio/common/ad_coll_build_req_new.lo CC adio/common/ad_coll_exch_new.lo CC adio/common/ad_darray.lo CC adio/common/ad_delete.lo CC adio/common/ad_done.lo CC adio/common/ad_done_fake.lo CC adio/common/ad_end.lo CC adio/common/ad_fcntl.lo CC adio/common/ad_features.lo CC adio/common/ad_flush.lo CC adio/common/ad_fstype.lo CC adio/common/ad_get_sh_fp.lo CC adio/common/ad_hints.lo CC adio/common/ad_init.lo CC adio/common/ad_io_coll.lo CC adio/common/ad_iopen.lo CC adio/common/ad_iread.lo CC adio/common/ad_iread_fake.lo CC adio/common/ad_iwrite.lo CC adio/common/ad_iwrite_fake.lo CC adio/common/ad_open.lo CC adio/common/ad_opencoll.lo CC adio/common/ad_opencoll_failsafe.lo CC adio/common/ad_opencoll_scalable.lo CC adio/common/ad_prealloc.lo CC adio/common/ad_read.lo CC adio/common/ad_read_coll.lo CC adio/common/ad_read_str.lo CC adio/common/ad_read_str_naive.lo CC adio/common/ad_resize.lo CC adio/common/ad_seek.lo CC adio/common/ad_set_sh_fp.lo CC adio/common/ad_set_view.lo CC adio/common/ad_subarray.lo CC adio/common/ad_wait.lo CC adio/common/ad_wait_fake.lo CC adio/common/ad_write.lo CC adio/common/ad_write_coll.lo CC adio/common/ad_write_nolock.lo CC adio/common/ad_write_str.lo CC adio/common/ad_write_str_naive.lo CC adio/common/adi_close.lo CC adio/common/byte_offset.lo CC adio/common/cb_config_list.lo CC adio/common/eof_offset.lo CC adio/common/error.lo CC adio/common/flatten.lo CC adio/common/get_fp_posn.lo CC adio/common/greq_fns.lo CC adio/common/heap-sort.lo CC adio/common/iscontig.lo CC adio/common/lock.lo CC adio/common/malloc.lo CC adio/common/shfp_fname.lo CC adio/common/status_setb.lo CC adio/common/strfns.lo CC adio/common/system_hints.lo CC adio/common/hint_fns.lo CC adio/common/ad_threaded_io.lo CC adio/common/p2p_aggregation.lo CC adio/common/utils.lo CCLD libromio.la make[3]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/mpi/romio' make[2]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/mpi/romio' Making all in src/pm/hydra make[2]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/pm/hydra' Making all in ../../mpl make[3]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/mpl' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/mpl' Making all in tools/topo/hwloc/hwloc make[3]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/pm/hydra/tools/topo/hwloc/hwloc' Making all in src make[4]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/pm/hydra/tools/topo/hwloc/hwloc/src' CC topology.lo CC traversal.lo CC distances.lo CC components.lo CC bind.lo CC bitmap.lo CC pci-common.lo CC diff.lo CC misc.lo CC base64.lo CC topology-noos.lo CC topology-synthetic.lo CC topology-custom.lo CC topology-xml.lo CC topology-xml-nolibxml.lo CC topology-xml-libxml.lo CC topology-pci.lo CC topology-linux.lo CC topology-x86.lo CCLD libhwloc_embedded.la make[4]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/pm/hydra/tools/topo/hwloc/hwloc/src' Making all in include make[4]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/pm/hydra/tools/topo/hwloc/hwloc/include' make[4]: Nothing to be done for `all'. make[4]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/pm/hydra/tools/topo/hwloc/hwloc/include' make[4]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/pm/hydra/tools/topo/hwloc/hwloc' make[4]: Nothing to be done for `all-am'. make[4]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/pm/hydra/tools/topo/hwloc/hwloc' make[3]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/pm/hydra/tools/topo/hwloc/hwloc' Making all in . make[3]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/pm/hydra' CC utils/alloc/alloc.lo CC utils/args/args.lo CC utils/dbg/dbg.lo CC utils/env/env.lo CC utils/launch/launch.lo CC utils/others/others.lo CC utils/signals/signals.lo CC utils/sock/sock.lo CC utils/string/string.lo CC tools/topo/topo.lo CC tools/topo/hwloc/topo_hwloc.lo CC tools/bootstrap/src/bsci_init.lo CC tools/bootstrap/src/bsci_finalize.lo CC tools/bootstrap/src/bsci_launch.lo CC tools/bootstrap/src/bsci_query_node_list.lo CC tools/bootstrap/src/bsci_query_proxy_id.lo CC tools/bootstrap/src/bsci_query_native_int.lo CC tools/bootstrap/src/bsci_wait.lo CC tools/bootstrap/src/bsci_env.lo CC tools/bootstrap/utils/bscu_wait.lo CC tools/bootstrap/utils/bscu_cb.lo CC tools/bootstrap/external/external_common.lo CC tools/bootstrap/external/external_common_launch.lo CC tools/bootstrap/external/fork_init.lo CC tools/bootstrap/external/user_init.lo CC tools/bootstrap/external/manual_init.lo CC tools/bootstrap/external/rsh_init.lo CC tools/bootstrap/external/rsh_env.lo CC tools/bootstrap/external/ssh_init.lo CC tools/bootstrap/external/ssh.lo CC tools/bootstrap/external/ssh_env.lo CC tools/bootstrap/external/ssh_finalize.lo CC tools/bootstrap/external/slurm_init.lo CC tools/bootstrap/external/slurm_launch.lo CC tools/bootstrap/external/slurm_env.lo CC tools/bootstrap/external/slurm_query_native_int.lo CC tools/bootstrap/external/slurm_query_node_list.lo CC tools/bootstrap/external/slurm_query_proxy_id.lo CC tools/bootstrap/external/ll_init.lo CC tools/bootstrap/external/ll_launch.lo CC tools/bootstrap/external/ll_query_native_int.lo CC tools/bootstrap/external/ll_query_node_list.lo CC tools/bootstrap/external/ll_query_proxy_id.lo CC tools/bootstrap/external/ll_env.lo CC tools/bootstrap/external/lsf_init.lo CC tools/bootstrap/external/lsf_query_native_int.lo CC tools/bootstrap/external/lsf_query_node_list.lo CC tools/bootstrap/external/lsf_env.lo CC tools/bootstrap/external/sge_init.lo CC tools/bootstrap/external/sge_query_native_int.lo CC tools/bootstrap/external/sge_query_node_list.lo CC tools/bootstrap/external/sge_env.lo CC tools/bootstrap/external/pbs_init.lo CC tools/bootstrap/external/pbs_query_native_int.lo CC tools/bootstrap/external/pbs_query_node_list.lo CC tools/bootstrap/external/cobalt_init.lo CC tools/bootstrap/external/cobalt_query_native_int.lo CC tools/bootstrap/external/cobalt_query_node_list.lo CC tools/bootstrap/persist/persist_init.lo CC tools/bootstrap/persist/persist_launch.lo CC tools/bootstrap/persist/persist_wait.lo CC tools/ckpoint/ckpoint.lo CC tools/demux/demux.lo CC tools/demux/demux_poll.lo CC tools/demux/demux_select.lo CC tools/debugger/debugger.lo CC tools/ftb/hydt_ftb_dummy.lo CC ui/utils/uiu.lo CCLD libhydra.la CC pm/pmiserv/pmiserv_pmi.lo CC pm/pmiserv/pmiserv_pmi_v1.lo CC pm/pmiserv/pmiserv_pmi_v2.lo CC pm/pmiserv/pmiserv_pmci.lo CC pm/pmiserv/pmiserv_cb.lo CC pm/pmiserv/pmiserv_utils.lo CC pm/pmiserv/common.lo CC pm/pmiserv/pmi_v2_common.lo CCLD libpm.la CC tools/bootstrap/persist/hydra_persist-persist_server.o CCLD hydra_persist CC tools/nameserver/hydra_nameserver-hydra_nameserver.o CCLD hydra_nameserver CC pm/pmiserv/hydra_pmi_proxy-pmip.o CC pm/pmiserv/hydra_pmi_proxy-pmip_cb.o CC pm/pmiserv/hydra_pmi_proxy-pmip_utils.o CC pm/pmiserv/hydra_pmi_proxy-pmip_pmi_v1.o CC pm/pmiserv/hydra_pmi_proxy-pmip_pmi_v2.o CC pm/pmiserv/hydra_pmi_proxy-common.o CC pm/pmiserv/hydra_pmi_proxy-pmi_v2_common.o CCLD hydra_pmi_proxy CC ui/mpich/mpiexec.o CC ui/mpich/utils.o CCLD mpiexec.hydra make[3]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/pm/hydra' make[2]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/pm/hydra' Making all in . make[2]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc' CC src/mpi/debugger/lib_libtvmpich_la-dll_mpich.lo CCLD lib/libtvmpich.la CC src/mpi/attr/lib_libmpi_la-attr_delete.lo CC src/mpi/attr/lib_libmpi_la-attr_get.lo CC src/mpi/attr/lib_libmpi_la-attr_put.lo CC src/mpi/attr/lib_libmpi_la-comm_create_keyval.lo CC src/mpi/attr/lib_libmpi_la-comm_delete_attr.lo CC src/mpi/attr/lib_libmpi_la-comm_free_keyval.lo CC src/mpi/attr/lib_libmpi_la-comm_get_attr.lo CC src/mpi/attr/lib_libmpi_la-comm_set_attr.lo CC src/mpi/attr/lib_libmpi_la-keyval_create.lo CC src/mpi/attr/lib_libmpi_la-keyval_free.lo CC src/mpi/attr/lib_libmpi_la-type_create_keyval.lo CC src/mpi/attr/lib_libmpi_la-type_delete_attr.lo CC src/mpi/attr/lib_libmpi_la-type_free_keyval.lo CC src/mpi/attr/lib_libmpi_la-type_get_attr.lo CC src/mpi/attr/lib_libmpi_la-type_set_attr.lo CC src/mpi/attr/lib_libmpi_la-win_create_keyval.lo CC src/mpi/attr/lib_libmpi_la-win_delete_attr.lo CC src/mpi/attr/lib_libmpi_la-win_free_keyval.lo CC src/mpi/attr/lib_libmpi_la-win_get_attr.lo CC src/mpi/attr/lib_libmpi_la-win_set_attr.lo CC src/mpi/coll/lib_libmpi_la-allreduce.lo CC src/mpi/coll/lib_libmpi_la-barrier.lo CC src/mpi/coll/lib_libmpi_la-op_create.lo CC src/mpi/coll/lib_libmpi_la-op_free.lo CC src/mpi/coll/lib_libmpi_la-bcast.lo CC src/mpi/coll/lib_libmpi_la-alltoall.lo CC src/mpi/coll/lib_libmpi_la-alltoallv.lo CC src/mpi/coll/lib_libmpi_la-reduce.lo CC src/mpi/coll/lib_libmpi_la-scatter.lo CC src/mpi/coll/lib_libmpi_la-gather.lo CC src/mpi/coll/lib_libmpi_la-scatterv.lo CC src/mpi/coll/lib_libmpi_la-gatherv.lo CC src/mpi/coll/lib_libmpi_la-scan.lo CC src/mpi/coll/lib_libmpi_la-exscan.lo CC src/mpi/coll/lib_libmpi_la-allgather.lo CC src/mpi/coll/lib_libmpi_la-allgatherv.lo CC src/mpi/coll/lib_libmpi_la-red_scat.lo CC src/mpi/coll/lib_libmpi_la-alltoallw.lo CC src/mpi/coll/lib_libmpi_la-reduce_local.lo CC src/mpi/coll/lib_libmpi_la-op_commutative.lo CC src/mpi/coll/lib_libmpi_la-red_scat_block.lo CC src/mpi/coll/lib_libmpi_la-iallgather.lo CC src/mpi/coll/lib_libmpi_la-iallgatherv.lo CC src/mpi/coll/lib_libmpi_la-iallreduce.lo CC src/mpi/coll/lib_libmpi_la-ialltoall.lo CC src/mpi/coll/lib_libmpi_la-ialltoallv.lo CC src/mpi/coll/lib_libmpi_la-ialltoallw.lo CC src/mpi/coll/lib_libmpi_la-ibarrier.lo CC src/mpi/coll/lib_libmpi_la-ibcast.lo CC src/mpi/coll/lib_libmpi_la-iexscan.lo CC src/mpi/coll/lib_libmpi_la-igather.lo CC src/mpi/coll/lib_libmpi_la-igatherv.lo CC src/mpi/coll/lib_libmpi_la-ired_scat.lo CC src/mpi/coll/lib_libmpi_la-ired_scat_block.lo CC src/mpi/coll/lib_libmpi_la-ireduce.lo CC src/mpi/coll/lib_libmpi_la-iscan.lo CC src/mpi/coll/lib_libmpi_la-iscatter.lo CC src/mpi/coll/lib_libmpi_la-iscatterv.lo CC src/mpi/comm/lib_libmpi_la-comm_compare.lo CC src/mpi/comm/lib_libmpi_la-comm_create.lo CC src/mpi/comm/lib_libmpi_la-comm_create_group.lo CC src/mpi/comm/lib_libmpi_la-comm_dup.lo CC src/mpi/comm/lib_libmpi_la-comm_dup_with_info.lo CC src/mpi/comm/lib_libmpi_la-comm_free.lo CC src/mpi/comm/lib_libmpi_la-comm_get_name.lo CC src/mpi/comm/lib_libmpi_la-comm_get_info.lo CC src/mpi/comm/lib_libmpi_la-comm_set_info.lo CC src/mpi/comm/lib_libmpi_la-comm_group.lo CC src/mpi/comm/lib_libmpi_la-comm_idup.lo CC src/mpi/comm/lib_libmpi_la-comm_rank.lo CC src/mpi/comm/lib_libmpi_la-comm_size.lo CC src/mpi/comm/lib_libmpi_la-comm_remote_group.lo CC src/mpi/comm/lib_libmpi_la-comm_remote_size.lo CC src/mpi/comm/lib_libmpi_la-comm_set_name.lo CC src/mpi/comm/lib_libmpi_la-comm_split.lo CC src/mpi/comm/lib_libmpi_la-comm_test_inter.lo CC src/mpi/comm/lib_libmpi_la-intercomm_create.lo CC src/mpi/comm/lib_libmpi_la-intercomm_merge.lo CC src/mpi/comm/lib_libmpi_la-comm_split_type.lo CC src/mpi/comm/lib_libmpi_la-comm_failure_ack.lo CC src/mpi/comm/lib_libmpi_la-comm_failure_get_acked.lo CC src/mpi/comm/lib_libmpi_la-comm_revoke.lo CC src/mpi/comm/lib_libmpi_la-comm_shrink.lo CC src/mpi/comm/lib_libmpi_la-comm_agree.lo CC 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src/util/dbg/lib_libmpi_la-dbg_printf.lo CC src/util/dbg/lib_libmpi_la-timelimit.lo CC src/util/dbg/lib_libmpi_la-exit.lo CC src/util/instrm/lib_libmpi_la-states.lo CC src/util/instrm/lib_libmpi_la-instr.lo CC src/util/mem/lib_libmpi_la-trmem.lo CC src/util/mem/lib_libmpi_la-handlemem.lo CC src/util/mem/lib_libmpi_la-safestr.lo CC src/util/mem/lib_libmpi_la-argstr.lo CC src/util/mem/lib_libmpi_la-strerror.lo CC src/util/msgs/lib_libmpi_la-msgprint.lo CC src/util/other/lib_libmpi_la-outliers.lo CC src/util/other/lib_libmpi_la-assert.lo CC src/util/cvar/lib_libmpi_la-mpich_cvars.lo CC src/util/procmap/lib_libmpi_la-local_proc.lo CC src/util/thread/lib_libmpi_la-mpiu_thread.lo CC src/binding/fortran/mpif_h/lib_libmpi_la-fdebug.lo CC src/binding/fortran/mpif_h/lib_libmpi_la-setbot.lo F77 src/binding/fortran/mpif_h/setbotf.lo CC src/binding/fortran/use_mpi/lib_libmpi_la-create_f90_util.lo CC src/glue/romio/lib_libmpi_la-glue_romio.lo CC src/mpid/ch3/src/lib_libmpi_la-ch3u_buffer.lo CC src/mpid/ch3/src/lib_libmpi_la-ch3u_comm.lo CC src/mpid/ch3/src/lib_libmpi_la-ch3u_comm_spawn_multiple.lo CC src/mpid/ch3/src/lib_libmpi_la-ch3u_handle_connection.lo CC src/mpid/ch3/src/lib_libmpi_la-ch3u_handle_recv_pkt.lo CC src/mpid/ch3/src/lib_libmpi_la-ch3u_handle_recv_req.lo CC src/mpid/ch3/src/lib_libmpi_la-ch3u_handle_revoke_pkt.lo CC src/mpid/ch3/src/lib_libmpi_la-ch3u_handle_send_req.lo CC src/mpid/ch3/src/lib_libmpi_la-ch3u_port.lo CC src/mpid/ch3/src/lib_libmpi_la-ch3u_recvq.lo CC src/mpid/ch3/src/lib_libmpi_la-ch3u_request.lo CC src/mpid/ch3/src/lib_libmpi_la-ch3u_rma_acc_ops.lo CC src/mpid/ch3/src/lib_libmpi_la-ch3u_rma_ops.lo CC src/mpid/ch3/src/lib_libmpi_la-ch3u_rma_reqops.lo CC src/mpid/ch3/src/lib_libmpi_la-ch3u_rma_sync.lo CC src/mpid/ch3/src/lib_libmpi_la-ch3u_rndv.lo CC src/mpid/ch3/src/lib_libmpi_la-ch3u_eager.lo CC src/mpid/ch3/src/lib_libmpi_la-ch3u_eagersync.lo CC src/mpid/ch3/src/lib_libmpi_la-ch3u_win_fns.lo CC src/mpid/ch3/src/lib_libmpi_la-mpid_abort.lo CC src/mpid/ch3/src/lib_libmpi_la-mpid_cancel_recv.lo CC src/mpid/ch3/src/lib_libmpi_la-mpid_cancel_send.lo CC src/mpid/ch3/src/lib_libmpi_la-mpid_comm_disconnect.lo CC src/mpid/ch3/src/lib_libmpi_la-mpid_comm_spawn_multiple.lo CC src/mpid/ch3/src/lib_libmpi_la-mpid_comm_failure_ack.lo CC src/mpid/ch3/src/lib_libmpi_la-mpid_comm_get_all_failed_procs.lo CC src/mpid/ch3/src/lib_libmpi_la-mpid_comm_revoke.lo CC src/mpid/ch3/src/lib_libmpi_la-mpid_comm_agree.lo CC src/mpid/ch3/src/lib_libmpi_la-mpid_finalize.lo CC src/mpid/ch3/src/lib_libmpi_la-mpid_get_universe_size.lo CC src/mpid/ch3/src/lib_libmpi_la-mpid_getpname.lo CC src/mpid/ch3/src/lib_libmpi_la-mpid_improbe.lo CC src/mpid/ch3/src/lib_libmpi_la-mpid_imrecv.lo CC src/mpid/ch3/src/lib_libmpi_la-mpid_init.lo CC src/mpid/ch3/src/lib_libmpi_la-mpid_iprobe.lo CC src/mpid/ch3/src/lib_libmpi_la-mpid_irecv.lo CC src/mpid/ch3/src/lib_libmpi_la-mpid_irsend.lo CC src/mpid/ch3/src/lib_libmpi_la-mpid_isend.lo CC src/mpid/ch3/src/lib_libmpi_la-mpid_issend.lo CC src/mpid/ch3/src/lib_libmpi_la-mpid_mprobe.lo CC src/mpid/ch3/src/lib_libmpi_la-mpid_mrecv.lo CC src/mpid/ch3/src/lib_libmpi_la-mpid_port.lo CC src/mpid/ch3/src/lib_libmpi_la-mpid_probe.lo CC src/mpid/ch3/src/lib_libmpi_la-mpid_recv.lo CC src/mpid/ch3/src/lib_libmpi_la-mpid_rsend.lo CC src/mpid/ch3/src/lib_libmpi_la-mpid_send.lo CC src/mpid/ch3/src/lib_libmpi_la-mpid_ssend.lo CC src/mpid/ch3/src/lib_libmpi_la-mpid_startall.lo CC src/mpid/ch3/src/lib_libmpi_la-mpid_vc.lo CC src/mpid/ch3/src/lib_libmpi_la-mpid_rma.lo CC src/mpid/ch3/src/lib_libmpi_la-mpidi_isend_self.lo CC src/mpid/ch3/src/lib_libmpi_la-mpidi_pg.lo CC src/mpid/ch3/src/lib_libmpi_la-mpidi_printf.lo CC src/mpid/ch3/channels/nemesis/src/lib_libmpi_la-ch3_finalize.lo CC src/mpid/ch3/channels/nemesis/src/lib_libmpi_la-ch3_init.lo CC src/mpid/ch3/channels/nemesis/src/lib_libmpi_la-ch3_isend.lo CC src/mpid/ch3/channels/nemesis/src/lib_libmpi_la-ch3_isendv.lo CC src/mpid/ch3/channels/nemesis/src/lib_libmpi_la-ch3_istartmsg.lo CC src/mpid/ch3/channels/nemesis/src/lib_libmpi_la-ch3_istartmsgv.lo CC src/mpid/ch3/channels/nemesis/src/lib_libmpi_la-ch3_progress.lo CC src/mpid/ch3/channels/nemesis/src/lib_libmpi_la-ch3_abort.lo CC src/mpid/ch3/channels/nemesis/src/lib_libmpi_la-ch3_rma_shm.lo CC src/mpid/ch3/channels/nemesis/src/lib_libmpi_la-ch3_win_fns.lo CC src/mpid/ch3/channels/nemesis/src/lib_libmpi_la-ch3i_comm.lo CC src/mpid/ch3/channels/nemesis/src/lib_libmpi_la-ch3i_eagernoncontig.lo CC src/mpid/ch3/channels/nemesis/src/lib_libmpi_la-mpid_nem_alloc.lo CC src/mpid/ch3/channels/nemesis/src/lib_libmpi_la-mpid_nem_init.lo CC src/mpid/ch3/channels/nemesis/src/lib_libmpi_la-mpid_nem_barrier.lo CC src/mpid/ch3/channels/nemesis/src/lib_libmpi_la-mpid_nem_mpich.lo CC src/mpid/ch3/channels/nemesis/src/lib_libmpi_la-mpid_nem_ckpt.lo CC src/mpid/ch3/channels/nemesis/src/lib_libmpi_la-mpid_nem_finalize.lo CC src/mpid/ch3/channels/nemesis/src/lib_libmpi_la-mpid_nem_network_poll.lo CC src/mpid/ch3/channels/nemesis/src/lib_libmpi_la-mpid_nem_network.lo CC src/mpid/ch3/channels/nemesis/src/lib_libmpi_la-mpid_nem_debug.lo CC src/mpid/ch3/channels/nemesis/src/lib_libmpi_la-mpid_nem_lmt.lo CC src/mpid/ch3/channels/nemesis/src/lib_libmpi_la-mpid_nem_lmt_shm.lo CC src/mpid/ch3/channels/nemesis/src/lib_libmpi_la-mpid_nem_net_array.lo CC src/mpid/ch3/channels/nemesis/src/lib_libmpi_la-mpid_nem_lmt_dma.lo CC src/mpid/ch3/channels/nemesis/src/lib_libmpi_la-mpid_nem_lmt_vmsplice.lo CC src/mpid/ch3/channels/nemesis/netmod/tcp/lib_libmpi_la-tcp_finalize.lo CC src/mpid/ch3/channels/nemesis/netmod/tcp/lib_libmpi_la-tcp_init.lo CC src/mpid/ch3/channels/nemesis/netmod/tcp/lib_libmpi_la-tcp_send.lo CC src/mpid/ch3/channels/nemesis/netmod/tcp/lib_libmpi_la-tcp_utility.lo CC src/mpid/ch3/channels/nemesis/netmod/tcp/lib_libmpi_la-socksm.lo CC src/mpid/ch3/channels/nemesis/netmod/tcp/lib_libmpi_la-tcp_getip.lo CC src/mpid/ch3/channels/nemesis/netmod/tcp/lib_libmpi_la-tcp_ckpt.lo CC src/mpid/ch3/channels/nemesis/netmod/none/lib_libmpi_la-none.lo CC src/mpid/ch3/channels/nemesis/utils/monitor/lib_libmpi_la-papi_defs.lo CC src/mpid/ch3/channels/nemesis/utils/replacements/lib_libmpi_la-mkstemp.lo CC src/mpid/common/datatype/dataloop/lib_libmpi_la-darray_support.lo CC src/mpid/common/datatype/dataloop/lib_libmpi_la-dataloop.lo CC src/mpid/common/datatype/dataloop/lib_libmpi_la-dataloop_create.lo CC src/mpid/common/datatype/dataloop/lib_libmpi_la-dataloop_create_blockindexed.lo CC src/mpid/common/datatype/dataloop/lib_libmpi_la-dataloop_create_contig.lo CC src/mpid/common/datatype/dataloop/lib_libmpi_la-dataloop_create_indexed.lo CC src/mpid/common/datatype/dataloop/lib_libmpi_la-dataloop_create_pairtype.lo CC src/mpid/common/datatype/dataloop/lib_libmpi_la-dataloop_create_struct.lo CC src/mpid/common/datatype/dataloop/lib_libmpi_la-dataloop_create_vector.lo CC src/mpid/common/datatype/dataloop/lib_libmpi_la-segment.lo CC src/mpid/common/datatype/dataloop/lib_libmpi_la-segment_count.lo CC src/mpid/common/datatype/dataloop/lib_libmpi_la-segment_flatten.lo CC src/mpid/common/datatype/dataloop/lib_libmpi_la-segment_packunpack.lo CC src/mpid/common/datatype/dataloop/lib_libmpi_la-subarray_support.lo CC src/mpid/common/datatype/lib_libmpi_la-mpid_contents_support.lo CC src/mpid/common/datatype/lib_libmpi_la-mpid_datatype_contents.lo CC src/mpid/common/datatype/lib_libmpi_la-mpid_datatype_free.lo CC src/mpid/common/datatype/lib_libmpi_la-mpid_ext32_datatype.lo CC src/mpid/common/datatype/lib_libmpi_la-mpid_ext32_segment.lo CC src/mpid/common/datatype/lib_libmpi_la-mpid_segment.lo CC src/mpid/common/datatype/lib_libmpi_la-mpid_type_blockindexed.lo CC src/mpid/common/datatype/lib_libmpi_la-mpid_type_commit.lo CC src/mpid/common/datatype/lib_libmpi_la-mpid_type_contiguous.lo CC src/mpid/common/datatype/lib_libmpi_la-mpid_type_create_pairtype.lo CC src/mpid/common/datatype/lib_libmpi_la-mpid_type_create_resized.lo CC src/mpid/common/datatype/lib_libmpi_la-mpid_type_debug.lo CC src/mpid/common/datatype/lib_libmpi_la-mpid_type_dup.lo CC src/mpid/common/datatype/lib_libmpi_la-mpid_type_get_contents.lo CC src/mpid/common/datatype/lib_libmpi_la-mpid_type_get_envelope.lo CC src/mpid/common/datatype/lib_libmpi_la-mpid_type_indexed.lo CC src/mpid/common/datatype/lib_libmpi_la-mpid_type_struct.lo CC src/mpid/common/datatype/lib_libmpi_la-mpid_type_vector.lo CC src/mpid/common/datatype/lib_libmpi_la-mpid_type_zerolen.lo CC src/mpid/common/datatype/lib_libmpi_la-mpir_type_flatten.lo CC src/mpid/common/sched/lib_libmpi_la-mpid_sched.lo CC src/mpid/common/thread/lib_libmpi_la-mpid_thread.lo CC src/mpi_t/lib_libmpi_la-mpit.lo CC src/nameserv/pmi/lib_libmpi_la-pmi_nameserv.lo CC src/pmi/simple/lib_libmpi_la-simple_pmiutil.lo CC src/pmi/simple/lib_libmpi_la-simple_pmi.lo CC src/mpi/debugger/src_mpi_debugger_libdbginitdummy_la-dbginit.lo CCLD src/mpi/debugger/libdbginitdummy.la GEN lib/libmpi.la CC src/binding/fortran/mpif_h/lib_libmpifort_la-sendf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-recvf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-get_countf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-bsendf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-ssendf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-rsendf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-bufattachf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-bufdetachf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-isendf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-ibsendf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-issendf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-irsendf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-irecvf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-waitf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-testf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-request_freef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-waitanyf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-testanyf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-waitallf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-testallf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-waitsomef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-testsomef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-iprobef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-probef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-cancelf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-testcancelf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-send_initf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-bsend_initf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-ssend_initf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-rsend_initf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-recv_initf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-startf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-startallf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-sendrecvf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-sndrcvrplf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-typecontigf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-type_vectorf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-type_hvectorf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-type_indexedf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-type_hindexedf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-type_structf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-type_extentf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-type_sizef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-type_lbf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-type_ubf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-type_commitf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-type_freef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-get_elementsf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-packf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-unpackf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-pack_sizef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-barrierf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-bcastf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-gatherf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-gathervf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-scatterf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-scattervf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-allgatherf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-allgathervf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-alltoallf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-alltoallvf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-alltoallwf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-exscanf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-reducef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-op_createf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-op_freef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-allreducef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-redscatf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-scanf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-group_sizef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-group_rankf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-grouptranksf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-group_comparef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-comm_groupf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-group_unionf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-groupinterf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-groupdifff.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-group_inclf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-group_exclf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-grouprinclf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-grouprexclf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-group_freef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-comm_sizef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-comm_rankf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-comm_comparef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-comm_dupf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-comm_dup_with_infof.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-comm_createf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-comm_splitf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-comm_freef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-commtesticf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-commrsizef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-commrgroupf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-iccreatef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-icmergef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-keyval_freef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-attr_putf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-attr_getf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-attr_deletef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-topo_testf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-cart_createf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-dims_createf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-graph_createf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-graphdims_getf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-graph_getf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-cartdim_getf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-cart_getf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-cart_rankf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-cart_coordsf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-grfnbcountf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-grfnbrsf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-cart_shiftf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-cart_subf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-cart_mapf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-graph_mapf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-getpnamef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-get_versionf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-get_library_versionf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-errhcreatef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-errhsetf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-errhgetf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-errhfreef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-error_stringf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-error_classf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-finalizef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-initializedf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-abortf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-close_portf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-comm_acceptf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-comm_connectf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-commdiscf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-commparentf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-comm_joinf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-comm_spawnf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-spawnmultf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-lookup_namef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-open_portf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-publish_namef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-unpubnamef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-comm_set_infof.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-comm_get_infof.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-accumulatef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-getf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-putf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-win_completef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-win_createf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-win_fencef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-win_freef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-win_get_groupf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-win_lockf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-win_postf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-win_startf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-win_testf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-win_unlockf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-win_waitf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-win_allocatef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-win_allocate_sharedf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-win_shared_queryf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-win_create_dynamicf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-win_attachf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-win_detachf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-win_get_infof.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-win_set_infof.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-get_accumulatef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-fetch_and_opf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-compare_and_swapf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-rputf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-rgetf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-raccumulatef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-rget_accumulatef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-win_lock_allf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-win_unlock_allf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-win_flushf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-win_flush_allf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-win_flush_localf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-win_flush_local_allf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-win_syncf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-adderrclassf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-adderrcodef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-adderrstringf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-commcallerrf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-commnewkeyf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-commdelattrf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-commfreekeyf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-comm_get_attrf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-commgetnamf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-comm_set_attrf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-comm_set_namef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-filecallerrf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-greqcompletef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-greqstartf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-isthrmainf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-query_threadf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-statgetclf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-statsetelf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-typenewkeyf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-typedelattrf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-type_dupf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-typefreekeyf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-type_get_attrf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-typegetcntsf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-typegetenvf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-typegnamef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-typesetattrf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-typesetnamef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-type_match_sizef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-wincallerrf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-winnewkeyf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-windelattrf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-winfreekeyf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-win_get_attrf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-win_get_namef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-win_set_attrf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-win_set_namef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-alloc_memf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-commcreerrf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-commgeterrf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-commseterrf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-filecreerrf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-filegeterrf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-fileseterrf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-finalizedf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-free_memf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-info_createf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-info_deletef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-info_dupf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-info_freef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-info_getf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-infognkf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-infognthkf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-infovallenf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-info_setf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-pack_externalf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-packesizef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-reqgetstatf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-typedarrayf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-typechindf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-typechvecf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-typecindbf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-type_create_hindexed_blockf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-typecresizef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-typecstructf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-typecsubarrf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-typegetextentf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-typegtextf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-unpackextf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-wincreerrf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-wingeterrf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-winseterrf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-reduce_localf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-op_commutativef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-reduce_scatter_blockf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-dist_graph_create_adjacentf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-dist_graph_createf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-dist_graph_neighbors_countf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-dist_graph_neighborsf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-improbef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-imrecvf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-mprobef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-mrecvf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-comm_idupf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-ibarrierf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-ibcastf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-igatherf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-igathervf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-iscatterf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-iscattervf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-iallgatherf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-iallgathervf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-ialltoallf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-ialltoallvf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-ialltoallwf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-ireducef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-iallreducef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-ireduce_scatterf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-ireduce_scatter_blockf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-iscanf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-iexscanf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-ineighbor_allgatherf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-ineighbor_allgathervf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-ineighbor_alltoallf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-ineighbor_alltoallvf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-ineighbor_alltoallwf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-neighbor_allgatherf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-neighbor_allgathervf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-neighbor_alltoallf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-neighbor_alltoallvf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-neighbor_alltoallwf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-comm_split_typef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-get_elements_xf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-status_set_elements_xf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-type_get_extent_xf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-type_get_true_extent_xf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-type_size_xf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-comm_create_groupf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-comm_failure_ackf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-comm_failure_get_ackedf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-comm_revokef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-comm_shrinkf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-comm_agreef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_openf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_closef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_deletef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_set_sizef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_preallocatef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_get_sizef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_get_groupf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_get_amodef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_set_infof.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_get_infof.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_set_viewf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_get_viewf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_read_atf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_read_at_allf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_write_atf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_write_at_allf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_iread_atf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_iwrite_atf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_readf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_read_allf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_writef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_write_allf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_ireadf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_iwritef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_seekf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_get_positionf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_get_byte_offsetf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_read_sharedf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_write_sharedf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_iread_sharedf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_iwrite_sharedf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_read_orderedf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_write_orderedf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_seek_sharedf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_get_position_sharedf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_read_at_all_beginf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_read_at_all_endf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_write_at_all_beginf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_write_at_all_endf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_read_all_beginf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_read_all_endf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_write_all_beginf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_write_all_endf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_read_ordered_beginf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_read_ordered_endf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_write_ordered_beginf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_write_ordered_endf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_get_type_extentf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-register_datarepf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_set_atomicityf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_get_atomicityf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-file_syncf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-initf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-initthreadf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-pcontrolf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-addressf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-getaddressf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-wtimef.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-wtickf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-keyval_createf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-dup_fnf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-null_del_fnf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-null_copy_fnf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-dup_comm_fnf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-null_comm_del_fnf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-null_comm_copy_fnf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-dup_win_fnf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-null_win_del_fnf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-null_win_copy_fnf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-dup_type_fnf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-null_type_del_fnf.lo CC src/binding/fortran/mpif_h/lib_libmpifort_la-null_type_copy_fnf.lo CC src/binding/fortran/use_mpi/lib_libmpifort_la-typef90cmplxf.lo CC src/binding/fortran/use_mpi/lib_libmpifort_la-typef90realf.lo CC src/binding/fortran/use_mpi/lib_libmpifort_la-typef90intf.lo rm -f src/binding/fortran/use_mpi/mpifnoext.h sed -e 's/^C/\!/g' -e '/EXTERNAL/d' \ -e '/REAL\*8/d' \ -e '/DOUBLE PRECISION/d' \ -e '/MPI_WTICK/d' src/binding/fortran/mpif_h/mpif.h > src/binding/fortran/use_mpi/mpifnoext.h MOD src/binding/fortran/use_mpi/mpi_constants.mod-stamp MOD src/binding/fortran/use_mpi/mpi_sizeofs.mod-stamp MOD src/binding/fortran/use_mpi/mpi_base.mod-stamp MOD src/binding/fortran/use_mpi/mpi.mod-stamp GEN lib/libmpifort.la CXX src/binding/cxx/initcxx.lo CXXLD lib/libmpicxx.la CC src/env/mpichversion.o CCLD src/env/mpichversion CC src/env/mpivars.o CCLD src/env/mpivars cp -p src/env/mpicc.bash src/env/mpicc cp -p src/env/mpifort.bash src/env/mpifort cp -p src/env/mpicxx.bash src/env/mpicxx make[2]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc' Making all in examples make[2]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/examples' CC cpi.o CCLD cpi make[2]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/examples' make[1]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc' make install-recursive make[1]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc' Making install in /export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/mpl make[2]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/mpl' make[3]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/mpl' make[3]: Nothing to be done for `install-exec-am'. make[3]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/mpl' make[2]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/mpl' Making install in /export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/openpa make[2]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/openpa' Making install in src make[3]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/openpa/src' make[4]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/openpa/src' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/local/mpich-3.1.3_64_gcc/include64' /usr/bin/install -c -m 644 ../../../../mpich-3.1.3/src/openpa/src/opa_primitives.h ../../../../mpich-3.1.3/src/openpa/src/opa_queue.h ../../../../mpich-3.1.3/src/openpa/src/opa_util.h '/usr/local/mpich-3.1.3_64_gcc/include64' /bin/mkdir -p '/usr/local/mpich-3.1.3_64_gcc/include64' /bin/mkdir -p '/usr/local/mpich-3.1.3_64_gcc/include64/primitives' /usr/bin/install -c -m 644 ../../../../mpich-3.1.3/src/openpa/src/primitives/opa_by_lock.h ../../../../mpich-3.1.3/src/openpa/src/primitives/opa_emulated.h ../../../../mpich-3.1.3/src/openpa/src/primitives/opa_gcc_ia64.h ../../../../mpich-3.1.3/src/openpa/src/primitives/opa_gcc_intel_32_64.h ../../../../mpich-3.1.3/src/openpa/src/primitives/opa_gcc_intel_32_64_barrier.h ../../../../mpich-3.1.3/src/openpa/src/primitives/opa_gcc_intel_32_64_ops.h ../../../../mpich-3.1.3/src/openpa/src/primitives/opa_gcc_intel_32_64_p3.h ../../../../mpich-3.1.3/src/openpa/src/primitives/opa_gcc_intel_32_64_p3barrier.h ../../../../mpich-3.1.3/src/openpa/src/primitives/opa_gcc_intrinsics.h ../../../../mpich-3.1.3/src/openpa/src/primitives/opa_gcc_ppc.h ../../../../mpich-3.1.3/src/openpa/src/primitives/opa_gcc_sicortex.h ../../../../mpich-3.1.3/src/openpa/src/primitives/opa_nt_intrinsics.h ../../../../mpich-3.1.3/src/openpa/src/primitives/opa_sun_atomic_ops.h ../../../../mpich-3.1.3/src/openpa/sr c/primitives/opa_unsafe.h '/usr/local/mpich-3.1.3_64_gcc/include64/primitives' /bin/mkdir -p '/usr/local/mpich-3.1.3_64_gcc/include64' /usr/bin/install -c -m 644 opa_config.h '/usr/local/mpich-3.1.3_64_gcc/include64' make[4]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/openpa/src' make[3]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/openpa/src' Making install in test make[3]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/openpa/test' make[4]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/openpa/test' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/openpa/test' make[3]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/openpa/test' make[3]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/openpa' make[4]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/openpa' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/local/mpich-3.1.3_64_gcc/lib64/pkgconfig' /usr/bin/install -c -m 644 openpa.pc '/usr/local/mpich-3.1.3_64_gcc/lib64/pkgconfig' make[4]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/openpa' make[3]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/openpa' make[2]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/openpa' Making install in src/mpi/romio make[2]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/mpi/romio' make[3]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/mpi/romio' make[4]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/mpi/romio' mkdir -p '/usr/local/mpich-3.1.3_64_gcc/include64' /usr/bin/install -c -m 644 include/mpio.h include/mpiof.h '/usr/local/mpich-3.1.3_64_gcc/include64' make[4]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/mpi/romio' make[3]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/mpi/romio' make[2]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/mpi/romio' Making install in src/pm/hydra make[2]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/pm/hydra' Making install in ../../mpl make[3]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/mpl' make[4]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/mpl' make[4]: Nothing to be done for `install-exec-am'. make[4]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/mpl' make[3]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/mpl' Making install in tools/topo/hwloc/hwloc make[3]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/pm/hydra/tools/topo/hwloc/hwloc' Making install in src make[4]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/pm/hydra/tools/topo/hwloc/hwloc/src' make[5]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/pm/hydra/tools/topo/hwloc/hwloc/src' make install-exec-hook make[6]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/pm/hydra/tools/topo/hwloc/hwloc/src' make[6]: Nothing to be done for `install-exec-hook'. make[6]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/pm/hydra/tools/topo/hwloc/hwloc/src' make[5]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/pm/hydra/tools/topo/hwloc/hwloc/src' make[4]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/pm/hydra/tools/topo/hwloc/hwloc/src' Making install in include make[4]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/pm/hydra/tools/topo/hwloc/hwloc/include' make[5]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/pm/hydra/tools/topo/hwloc/hwloc/include' make[5]: Nothing to be done for `install-exec-am'. make[5]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/pm/hydra/tools/topo/hwloc/hwloc/include' make[4]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/pm/hydra/tools/topo/hwloc/hwloc/include' make[4]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/pm/hydra/tools/topo/hwloc/hwloc' make[5]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/pm/hydra/tools/topo/hwloc/hwloc' make[5]: Nothing to be done for `install-exec-am'. make[5]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/pm/hydra/tools/topo/hwloc/hwloc' make[4]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/pm/hydra/tools/topo/hwloc/hwloc' make[3]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/pm/hydra/tools/topo/hwloc/hwloc' Making install in . make[3]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/pm/hydra' make[4]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/pm/hydra' mkdir -p '/usr/local/mpich-3.1.3_64_gcc/bin' /bin/sh ./libtool --mode=install /usr/bin/install -c hydra_persist hydra_nameserver hydra_pmi_proxy mpiexec.hydra '/usr/local/mpich-3.1.3_64_gcc/bin' libtool: install: /usr/bin/install -c hydra_persist /usr/local/mpich-3.1.3_64_gcc/bin/hydra_persist libtool: install: /usr/bin/install -c hydra_nameserver /usr/local/mpich-3.1.3_64_gcc/bin/hydra_nameserver libtool: install: /usr/bin/install -c hydra_pmi_proxy /usr/local/mpich-3.1.3_64_gcc/bin/hydra_pmi_proxy libtool: install: /usr/bin/install -c mpiexec.hydra /usr/local/mpich-3.1.3_64_gcc/bin/mpiexec.hydra make install-exec-hook make[5]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/pm/hydra' if [ -x /usr/local/mpich-3.1.3_64_gcc/bin/mpiexec.hydra ] ; then \ cd /usr/local/mpich-3.1.3_64_gcc/bin && ln -f -s mpiexec.hydra mpiexec ; \ cd /usr/local/mpich-3.1.3_64_gcc/bin && ln -f -s mpiexec.hydra mpirun ; \ fi make[5]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/pm/hydra' make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/pm/hydra' make[3]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/pm/hydra' make[2]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/src/pm/hydra' Making install in . make[2]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc' make[3]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc' mkdir -p '/usr/local/mpich-3.1.3_64_gcc/lib64' /bin/sh ./libtool --mode=install /usr/bin/install -c lib/libtvmpich.la lib/libmpi.la lib/libmpifort.la lib/libmpicxx.la '/usr/local/mpich-3.1.3_64_gcc/lib64' libtool: install: /usr/bin/install -c lib/.libs/libtvmpich.so.12.0.4 /usr/local/mpich-3.1.3_64_gcc/lib64/libtvmpich.so.12.0.4 libtool: install: (cd /usr/local/mpich-3.1.3_64_gcc/lib64 && { ln -s -f libtvmpich.so.12.0.4 libtvmpich.so.12 || { rm -f libtvmpich.so.12 && ln -s libtvmpich.so.12.0.4 libtvmpich.so.12; }; }) libtool: install: (cd /usr/local/mpich-3.1.3_64_gcc/lib64 && { ln -s -f libtvmpich.so.12.0.4 libtvmpich.so || { rm -f libtvmpich.so && ln -s libtvmpich.so.12.0.4 libtvmpich.so; }; }) libtool: install: /usr/bin/install -c lib/.libs/libtvmpich.lai /usr/local/mpich-3.1.3_64_gcc/lib64/libtvmpich.la libtool: install: /usr/bin/install -c lib/.libs/libmpi.so.12.0.4 /usr/local/mpich-3.1.3_64_gcc/lib64/libmpi.so.12.0.4 libtool: install: (cd /usr/local/mpich-3.1.3_64_gcc/lib64 && { ln -s -f libmpi.so.12.0.4 libmpi.so.12 || { rm -f libmpi.so.12 && ln -s libmpi.so.12.0.4 libmpi.so.12; }; }) libtool: install: (cd /usr/local/mpich-3.1.3_64_gcc/lib64 && { ln -s -f libmpi.so.12.0.4 libmpi.so || { rm -f libmpi.so && ln -s libmpi.so.12.0.4 libmpi.so; }; }) libtool: install: /usr/bin/install -c lib/.libs/libmpi.lai /usr/local/mpich-3.1.3_64_gcc/lib64/libmpi.la libtool: install: warning: relinking `lib/libmpifort.la' libtool: install: (cd /export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc; /bin/sh /export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/libtool --silent --tag FC --mode=relink gfortran -Isrc/binding/fortran/use_mpi -Jsrc/binding/fortran/use_mpi -m64 -O2 -version-info 12:4:0 -m64 -o lib/libmpifort.la -rpath /usr/local/mpich-3.1.3_64_gcc/lib64 src/binding/fortran/mpif_h/lib_libmpifort_la-sendf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-recvf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-get_countf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-bsendf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-ssendf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-rsendf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-bufattachf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-bufdetachf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-isendf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-ibsendf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-issendf.lo src/binding/fortran /mpif_h/lib_libmpifort_la-irsendf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-irecvf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-waitf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-testf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-request_freef.lo src/binding/fortran/mpif_h/lib_libmpifort_la-waitanyf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-testanyf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-waitallf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-testallf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-waitsomef.lo src/binding/fortran/mpif_h/lib_libmpifort_la-testsomef.lo src/binding/fortran/mpif_h/lib_libmpifort_la-iprobef.lo src/binding/fortran/mpif_h/lib_libmpifort_la-probef.lo src/binding/fortran/mpif_h/lib_libmpifort_la-cancelf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-testcancelf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-send_initf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-bsend_initf.lo src/binding/fortran/mpif_h/lib_libmpi fort_la-ssend_initf.lo src/binding/fortran/mpif_h/lib_libmpi! fort_la-rsend_initf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-recv_initf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-startf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-startallf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-sendrecvf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-sndrcvrplf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-typecontigf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-type_vectorf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-type_hvectorf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-type_indexedf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-type_hindexedf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-type_structf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-type_extentf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-type_sizef.lo src/binding/fortran/mpif_h/lib_libmpifort_la-type_lbf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-type_ubf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-type_commitf.lo src/binding/f ortran/mpif_h/lib_libmpifort_la-type_freef.lo src/binding/fortran/mpif_h/lib_libmpifort_la-get_elementsf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-packf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-unpackf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-pack_sizef.lo src/binding/fortran/mpif_h/lib_libmpifort_la-barrierf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-bcastf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-gatherf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-gathervf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-scatterf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-scattervf.lo 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src/binding/fortran/mpif_h/lib_libmpifort_la-ineighbor_alltoallvf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-ineighbor_alltoallwf.lo src/binding/fortran/mpif _h/lib_libmpifort_la-neighbor_allgatherf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-neighbor_allgathervf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-neighbor_alltoallf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-neighbor_alltoallvf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-neighbor_alltoallwf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-comm_split_typef.lo src/binding/fortran/mpif_h/lib_libmpifort_la-get_elements_xf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-status_set_elements_xf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-type_get_extent_xf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-type_get_true_extent_xf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-type_size_xf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-comm_create_groupf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-comm_failure_ackf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-comm_failure_get_ackedf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-comm_revokef.lo src/bin ding/fortran/mpif_h/lib_libmpifort_la-comm_shrinkf.lo src/bi! nding/for! tran/mpif_h/lib_libmpifort_la-comm_agreef.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_openf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_closef.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_deletef.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_set_sizef.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_preallocatef.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_get_sizef.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_get_groupf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_get_amodef.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_set_infof.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_get_infof.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_set_viewf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_get_viewf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_read_atf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_read_at_allf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_write_atf.lo s rc/binding/fortran/mpif_h/lib_libmpifort_la-file_write_at_allf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_iread_atf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_iwrite_atf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_readf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_read_allf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_writef.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_write_allf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_ireadf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_iwritef.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_seekf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_get_positionf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_get_byte_offsetf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_read_sharedf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_write_sharedf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_iread_sharedf.lo src/binding/fortran/mpif_h/lib_li bmpifort_la-file_iwrite_sharedf.lo src/binding/fortran/mpif_! h/lib_lib! mpifort_la-file_read_orderedf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_write_orderedf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_seek_sharedf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_get_position_sharedf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_read_at_all_beginf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_read_at_all_endf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_write_at_all_beginf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_write_at_all_endf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_read_all_beginf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_read_all_endf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_write_all_beginf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_write_all_endf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_read_ordered_beginf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_read_ordered_endf.lo src/binding/fortran/mpif_h/lib_libmpifort_la -file_write_ordered_beginf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_write_ordered_endf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_get_type_extentf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-register_datarepf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_set_atomicityf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_get_atomicityf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-file_syncf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-initf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-initthreadf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-pcontrolf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-addressf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-getaddressf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-wtimef.lo src/binding/fortran/mpif_h/lib_libmpifort_la-wtickf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-keyval_createf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-dup_fnf.lo src/binding/fortran/mpif_h/lib_libmpif ort_la-null_del_fnf.lo src/binding/fortran/mpif_h/lib_libmpi! fort_la-n! ull_copy_fnf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-dup_comm_fnf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-null_comm_del_fnf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-null_comm_copy_fnf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-dup_win_fnf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-null_win_del_fnf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-null_win_copy_fnf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-dup_type_fnf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-null_type_del_fnf.lo src/binding/fortran/mpif_h/lib_libmpifort_la-null_type_copy_fnf.lo src/binding/fortran/use_mpi/lib_libmpifort_la-typef90cmplxf.lo src/binding/fortran/use_mpi/lib_libmpifort_la-typef90realf.lo src/binding/fortran/use_mpi/lib_libmpifort_la-typef90intf.lo src/binding/fortran/use_mpi/mpi.lo src/binding/fortran/use_mpi/mpi_constants.lo src/binding/fortran/use_mpi/mpi_sizeofs.lo src/binding/fortran/use_mpi/mpi_base.lo lib/libmpi.la -lpthread ) libtool: install: /usr/bin/install -c lib/.libs/libmpifort.so.12.0.4T /usr/local/mpich-3.1.3_64_gcc/lib64/libmpifort.so.12.0.4 libtool: install: (cd /usr/local/mpich-3.1.3_64_gcc/lib64 && { ln -s -f libmpifort.so.12.0.4 libmpifort.so.12 || { rm -f libmpifort.so.12 && ln -s libmpifort.so.12.0.4 libmpifort.so.12; }; }) libtool: install: (cd /usr/local/mpich-3.1.3_64_gcc/lib64 && { ln -s -f libmpifort.so.12.0.4 libmpifort.so || { rm -f libmpifort.so && ln -s libmpifort.so.12.0.4 libmpifort.so; }; }) libtool: install: /usr/bin/install -c lib/.libs/libmpifort.lai /usr/local/mpich-3.1.3_64_gcc/lib64/libmpifort.la libtool: install: warning: relinking `lib/libmpicxx.la' libtool: install: (cd /export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc; /bin/sh /export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/libtool --silent --tag CXX --mode=relink g++ -m64 -O2 -version-info 12:4:0 -m64 -o lib/libmpicxx.la -rpath /usr/local/mpich-3.1.3_64_gcc/lib64 src/binding/cxx/initcxx.lo lib/libmpi.la -lpthread ) libtool: install: /usr/bin/install -c lib/.libs/libmpicxx.so.12.0.4T /usr/local/mpich-3.1.3_64_gcc/lib64/libmpicxx.so.12.0.4 libtool: install: (cd /usr/local/mpich-3.1.3_64_gcc/lib64 && { ln -s -f libmpicxx.so.12.0.4 libmpicxx.so.12 || { rm -f libmpicxx.so.12 && ln -s libmpicxx.so.12.0.4 libmpicxx.so.12; }; }) libtool: install: (cd /usr/local/mpich-3.1.3_64_gcc/lib64 && { ln -s -f libmpicxx.so.12.0.4 libmpicxx.so || { rm -f libmpicxx.so && ln -s libmpicxx.so.12.0.4 libmpicxx.so; }; }) libtool: install: /usr/bin/install -c lib/.libs/libmpicxx.lai /usr/local/mpich-3.1.3_64_gcc/lib64/libmpicxx.la libtool: install: /usr/bin/install -c lib/.libs/libtvmpich.a /usr/local/mpich-3.1.3_64_gcc/lib64/libtvmpich.a libtool: install: chmod 644 /usr/local/mpich-3.1.3_64_gcc/lib64/libtvmpich.a libtool: install: ranlib /usr/local/mpich-3.1.3_64_gcc/lib64/libtvmpich.a libtool: install: /usr/bin/install -c lib/.libs/libmpi.a /usr/local/mpich-3.1.3_64_gcc/lib64/libmpi.a libtool: install: chmod 644 /usr/local/mpich-3.1.3_64_gcc/lib64/libmpi.a libtool: install: ranlib /usr/local/mpich-3.1.3_64_gcc/lib64/libmpi.a libtool: install: /usr/bin/install -c lib/.libs/libmpifort.a /usr/local/mpich-3.1.3_64_gcc/lib64/libmpifort.a libtool: install: chmod 644 /usr/local/mpich-3.1.3_64_gcc/lib64/libmpifort.a libtool: install: ranlib /usr/local/mpich-3.1.3_64_gcc/lib64/libmpifort.a libtool: install: /usr/bin/install -c lib/.libs/libmpicxx.a /usr/local/mpich-3.1.3_64_gcc/lib64/libmpicxx.a libtool: install: chmod 644 /usr/local/mpich-3.1.3_64_gcc/lib64/libmpicxx.a libtool: install: ranlib /usr/local/mpich-3.1.3_64_gcc/lib64/libmpicxx.a libtool: finish: PATH="/usr/local/jdk1.8.0/bin:/usr/local/apache-ant-1.6.2/bin:/usr/local/gcc-4.9.1/bin:/opt/solstudio12.3/bin:/usr/local/sbin:/usr/local/bin:/usr/local/ssl/bin:/usr/local/pgsql/bin:/sbin:/usr/sbin:/bin:/usr/bin:/usr/X11R6/bin:/usr/local/teTeX-1.0.7/bin/i586-pc-linux-gnu:/root/Linux/x86_64/bin:.:/sbin" ldconfig -n /usr/local/mpich-3.1.3_64_gcc/lib64 ---------------------------------------------------------------------- Libraries have been installed in: /usr/local/mpich-3.1.3_64_gcc/lib64 If you ever happen to want to link against installed libraries in a given directory, LIBDIR, you must either use libtool, and specify the full pathname of the library, or use the `-LLIBDIR' flag during linking and do at least one of the following: - add LIBDIR to the `LD_LIBRARY_PATH' environment variable during execution - add LIBDIR to the `LD_RUN_PATH' environment variable during linking - use the `-Wl,-rpath -Wl,LIBDIR' linker flag - have your system administrator add LIBDIR to `/etc/ld.so.conf' See any operating system documentation about shared libraries for more information, such as the ld(1) and ld.so(8) manual pages. ---------------------------------------------------------------------- mkdir -p '/usr/local/mpich-3.1.3_64_gcc/bin' /bin/sh ./libtool --mode=install /usr/bin/install -c src/env/mpichversion src/env/mpivars '/usr/local/mpich-3.1.3_64_gcc/bin' libtool: install: /usr/bin/install -c src/env/mpichversion /usr/local/mpich-3.1.3_64_gcc/bin/mpichversion libtool: install: /usr/bin/install -c src/env/mpivars /usr/local/mpich-3.1.3_64_gcc/bin/mpivars mkdir -p '/usr/local/mpich-3.1.3_64_gcc/bin' /usr/bin/install -c src/env/mpicc src/env/parkill src/env/mpifort src/env/mpicxx '/usr/local/mpich-3.1.3_64_gcc/bin' make install-exec-hook make[4]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc' for e in /usr/local/mpich-3.1.3_64_gcc/bin/mpicc /usr/local/mpich-3.1.3_64_gcc/bin/mpicxx \ /usr/local/mpich-3.1.3_64_gcc/bin/mpif77 /usr/local/mpich-3.1.3_64_gcc/bin/mpifort ; do \ if test -e ${e} ; then \ sed -e 's|__PREFIX_TO_BE_FILLED_AT_INSTALL_TIME__|/usr/local/mpich-3.1.3_64_gcc|g' \ -e 's|__EXEC_PREFIX_TO_BE_FILLED_AT_INSTALL_TIME__|/usr/local/mpich-3.1.3_64_gcc|g' \ -e 's|__SYSCONFDIR_TO_BE_FILLED_AT_INSTALL_TIME__|/usr/local/mpich-3.1.3_64_gcc/etc|g' \ -e 's|__INCLUDEDIR_TO_BE_FILLED_AT_INSTALL_TIME__|/usr/local/mpich-3.1.3_64_gcc/include64|g' \ -e 's|__LIBDIR_TO_BE_FILLED_AT_INSTALL_TIME__|/usr/local/mpich-3.1.3_64_gcc/lib64|g' ${e} > ${e}.tmp ; \ /usr/bin/install -c ${e}.tmp ${e} ; \ rm -f ${e}.tmp ; \ fi ; \ done ; \ if test -e /usr/local/mpich-3.1.3_64_gcc/bin/mpicxx ; then \ cd /usr/local/mpich-3.1.3_64_gcc/bin && ln -f -s mpicxx mpic++ ; fi ; \ if test -e /usr/local/mpich-3.1.3_64_gcc/bin/mpifort ; then \ cd /usr/local/mpich-3.1.3_64_gcc/bin && ln -f -s mpifort mpif90 ; fi ; \ if test -e /usr/local/mpich-3.1.3_64_gcc/bin/mpifort -a ! -e /usr/local/mpich-3.1.3_64_gcc/bin/mpif77 ; then \ cd /usr/local/mpich-3.1.3_64_gcc/bin && ln -f -s mpifort mpif77 ; fi ; \ if test -e /usr/local/mpich-3.1.3_64_gcc/lib64/libmpi.so ; then \ cd /usr/local/mpich-3.1.3_64_gcc/lib64 && ln -f -s libmpi.so libmpl.so ; \ cd /usr/local/mpich-3.1.3_64_gcc/lib64 && ln -f -s libmpi.so libopa.so ; \ cd /usr/local/mpich-3.1.3_64_gcc/lib64 && ln -f -s libmpi.so libmpich.so ; fi ; \ if test -e /usr/local/mpich-3.1.3_64_gcc/lib64/libmpifort.so ; then \ cd /usr/local/mpich-3.1.3_64_gcc/lib64 && ln -f -s libmpifort.so libfmpich.so ; \ cd /usr/local/mpich-3.1.3_64_gcc/lib64 && ln -f -s libmpifort.so libmpichf90.so ; fi ; \ if test -e /usr/local/mpich-3.1.3_64_gcc/lib64/libmpicxx.so ; then \ cd /usr/local/mpich-3.1.3_64_gcc/lib64 && ln -f -s libmpicxx.so libmpichcxx.so ; fi make[4]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc' if [ ! -e /usr/local/mpich-3.1.3_64_gcc/share/doc/mpich ] ; then mkdir -p /usr/local/mpich-3.1.3_64_gcc/share/doc/mpich ; fi if [ -s ../mpich-3.1.3/doc/userguide/user.pdf ] ; then /usr/bin/install -c -m 644 ../mpich-3.1.3/doc/userguide/user.pdf /usr/local/mpich-3.1.3_64_gcc/share/doc/mpich/user.pdf ; fi if [ -s ../mpich-3.1.3/doc/installguide/install.pdf ] ; then /usr/bin/install -c -m 644 ../mpich-3.1.3/doc/installguide/install.pdf /usr/local/mpich-3.1.3_64_gcc/share/doc/mpich/install.pdf ; fi if [ -s ../mpich-3.1.3/doc/logging/logging.pdf ] ; then /usr/bin/install -c -m 644 ../mpich-3.1.3/doc/logging/logging.pdf /usr/local/mpich-3.1.3_64_gcc/share/doc/mpich/logging.pdf ; fi mkdir -p '/usr/local/mpich-3.1.3_64_gcc/include64' /usr/bin/install -c -m 644 src/binding/fortran/use_mpi/mpi.mod src/binding/fortran/use_mpi/mpi_sizeofs.mod src/binding/fortran/use_mpi/mpi_constants.mod src/binding/fortran/use_mpi/mpi_base.mod '/usr/local/mpich-3.1.3_64_gcc/include64' mkdir -p '/usr/local/mpich-3.1.3_64_gcc/include64' /usr/bin/install -c -m 644 src/binding/cxx/mpicxx.h src/binding/fortran/mpif_h/mpif.h src/include/mpi.h '/usr/local/mpich-3.1.3_64_gcc/include64' mkdir -p '/usr/local/mpich-3.1.3_64_gcc/lib64/pkgconfig' /usr/bin/install -c -m 644 src/packaging/pkgconfig/mpich.pc '/usr/local/mpich-3.1.3_64_gcc/lib64/pkgconfig' make[3]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc' make[2]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc' Making install in examples make[2]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/examples' make[3]: Entering directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/examples' make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/examples' make[2]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc/examples' make[1]: Leaving directory `/export2/src/mpich-3.1.3/mpich-3.1.3-Linux.x86_64.64_gcc' _______________________________________________ discuss mailing list discuss(a)mpich.org To manage subscription options or unsubscribe: https://lists.mpich.org/mailman/listinfo/discuss

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